pycom16g25200
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
27013488 .. 27016662
3175 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g25200.1

Sequence Viewer

Length: 1326 bp
ATGCAACATCTTCTCGGTAGATCACATGCAGTGCTGGAATTAAAAGTAAAAAGGAAACAGAGAAACAAGTATCGTAATCAAGTAATGCGAGGAAAACTTGCACTTGAGATCGATCTTGCTGGTAGCGAACGAGCTTCGGAAACAAACAGTGGAGGCCAAAAGTTAAGGGATGGTGCAAATATTAACCGTTCACTTCTTGCTTTAGCAAGCTGCATAAATGCACTTGGGAAACAGCAAAAGAAGGGTCTTGCTTATGTTCCTTACCGTAATAGCAAATTGACACGAATACTCAAAGATGGTTTGAGTGGCAATTCTCAAACTATCATGGTTGCTACTGTATCCCCTTTGGACAGTCAATATCATCACACTGTGAATACCTTGAAATATGCTGATCGAGCAAAGGAGATAAAGACACACATCCAGAAAAACATTGGCACTATTGATACCCATGTATCAGACTACCAACAAATGATTGACAGTCTTCAGATTGAGGTTTGTCAATTGAGAAAAGAACTAGCTGAAAAGGAATCACAGCTAAGTGTCAAGCCTGTTGAAAAGGCTGCAGACAATGAACTTTCGTGGTTGAATATTTTGAGCCATGAAACCAGTGAAAATGTTCAGGAAAGGATAAACTTACAGAAGGCATCATTTGAGCTTGAGGAAACCAACCTTCGTAACCGGATTGAACTCCAACATCTTGATGATGCTATAGCAAAACAACAGGCTATTGGAAACGATGGTGAAATTTTAGAGGCCATGAGAACGAGGCGACAAGTTATTCTGGATAACATCCGGGACAATGATGAAGCTGGTGTTAATTACCATATGGAAATCGAAGCAAATGAGAAGCATCGATGCAATCTTCAAAATATGATTGAGGAGGTCATTAGTAACAATGGAAATAAAACGTACTTGCGTATTCTTAGTCAATACAGGCTCTTGGGAATGGCAAATACTGAGCTTCAGTTTGAAATGGCAATGAGGGATCGAGTGATTAACAACCAACGGGAAACACTGCGAAACATGTGGGACTTGCTTATGGGGTTAGGACTTGATGAGAGACAGATCATGGACCTTGCATCTAAGAAGGGAATAACAATAGAAGAAGACTCTACAACGACACCCCTTCTGGGGCTTTTTGGTAGGGAGCAATCACCAGATTTGGATTCCGGAAAATATGCTTCTTTAGGTCCTTGTCGTGGCATGGGGCATTTGTATTCTAGATCGATCTTCCACCTTTCAGCACTCTCAAGAGTTAGGTCCGAGATCATTGCCCCGGGGGCGTTTGGACTTGACTCAGTCTTTTTGCAGAGAGGAACACCATAG

Protein Analysis

442

Amino Acids

49.9

Weight (kDa)

8.2

Isoelectric Point (pI)

50.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 7 - 136 1.8e-45 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000528)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49650
fragaria_vesca FvH4_1g18770 FvH4_1g18770 FvH4_7g34230
malus_domestica MD01G1046900.v1.1 MD15G1305400.v1.1 MD16G1282300.v1.1
prunus_persica Prupe.6G211700_v2.0.a1 Prupe.6G211700_v2.0.a1
pyrus_communis pycom01g07280 pycom15g26860 pycom16g25190 pycom16g25200
rosa_chinensis RchiOBHm_Chr1g0351151 RchiOBHm_Chr2g0109641 RchiOBHm_Chr4g0386971 RchiOBHm_Chr4g0413031 RchiOBHm_Chr4g0429541
rosa_laevigata RLG00000007037 RLG00000009264 RLG00000009427 RLG00000015442 RLG00000017752 RLG00000017990 RLG00000022570 RLG00000028427
rosa_multiflora Rmu_sc0000031.1_g000013 Rmu_sc0000332.1_g000058 Rmu_sc0000346.1_g000014 Rmu_sc0000698.1_g000147 Rmu_sc0001152.1_g000047 Rmu_sc0001494.1_g000003 Rmu_sc0002254.1_g000001 Rmu_sc0002531.1_g000001 Rmu_sc0002717.1_g000016 Rmu_sc0002717.1_g000017 Rmu_sc0003220.1_g000024 Rmu_sc0005016.1_g000007 Rmu_sc0005608.1_g000020 Rmu_sc0010686.1_g000003 Rmu_sc0011012.1_g000011 Rmu_sc0021503.1_g000001
rosa_roxburghii Rroxscaffold_2G00082300 Rroxscaffold_2G00099190 Rroxscaffold_2G00129660 Rroxscaffold_2G00134070 Rroxscaffold_3G00236170 Rroxscaffold_5G00346460 Rroxscaffold_7G00156600 Rroxscaffold_7G00205430
rosa_rugosa Rorug01G0267800 Rorug02G0020700 Rorug02G0020700 Rorug02G0161500 Rorug02G0384900 Rorug05G0567000
rosa_samantha Rh1AG062400 Rh1AG132200 Rh1AG231500 Rh1CG126100 Rh1CG184600 Rh1CG215600 Rh1CG237400 Rh2AG213700 Rh2BG068400 Rh2BG224100 Rh2BG239600 Rh2CG069600 Rh2CG216000 Rh2CG585300 Rh2DG067600 Rh2DG219200 Rh4AG177200 Rh5AG509600 Rh5BG290500 Rh5BG328900 Rh5DG300300 Rh5DG340100 Rh6BG103200 Rh7DG421500
rosa_wichuraiana Rw1G006030 Rw1G006580 Rw2G006320 Rw5G004390 Rw5G029130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 1169
AclWI GGATC 1 cut(s) 993
AcsI RAATTY 1 cut(s) 744
AcuI CTGAAG 2 cut(s) 467, 947
AdeI CACNNNGTG 1 cut(s) 370
AfaI GTAC 1 cut(s) 911
AfiI CCNNNNNNNGG 3 cut(s) 1130, 1131, 1199
AflIII ACRYGT 1 cut(s) 1023
AgsI TTSAA 6 cut(s) 382, 554, 586, 686, 866, 971
AluBI AGCT 7 cut(s) 134, 210, 518, 535, 655, 809, 961
AluI AGCT 7 cut(s) 134, 210, 518, 535, 655, 809, 961
Alw26I GTCTC 1 cut(s) 1054
AlwI GGATC 1 cut(s) 993
Ama87I CYCGRG 1 cut(s) 1276
Aor13HI TCCGGA 1 cut(s) 1169
AoxI GGCC 2 cut(s) 154, 753
ApeKI GCWGC 2 cut(s) 210, 560
ApoI RAATTY 1 cut(s) 744
ArsI GACNNNNNNTTYG 2 cut(s) 229, 261
Asp700I GAANNNNTTC 1 cut(s) 615
AspS9I GGNCC 3 cut(s) 1072, 1190, 1260
AsuC2I CCSGG 3 cut(s) 794, 1277, 1278
AsuHPI GGTGA 2 cut(s) 752, 1146
AvaI CYCGRG 1 cut(s) 1276
AvaII GGWCC 3 cut(s) 1072, 1190, 1260
BaeI ACNNNNGTAYC 4 cut(s) 435, 435, 468, 468
BbsI GAAGAC 2 cut(s) 473, 1113
BbvI GCAGC 2 cut(s) 197, 547
BccI CCATC 3 cut(s) 164, 290, 731
BcgI CGANNNNNNTGC 2 cut(s) 1253, 1287
BciVI GTATCC 1 cut(s) 349
BcnI CCSGG 3 cut(s) 794, 1277, 1278
BcoDI GTCTC 1 cut(s) 1054
BfaI CTAG 2 cut(s) 515, 1221
BfmI CTRYAG 2 cut(s) 561, 708
BfuI GTATCC 1 cut(s) 349
BglI GCCNNNNNGGC 1 cut(s) 1280
BisI GCNGC 2 cut(s) 211, 561
BlsI GCNGC 2 cut(s) 212, 562
Bme1390I CCNGG 3 cut(s) 794, 1277, 1278
Bme18I GGWCC 3 cut(s) 1072, 1190, 1260
BmeT110I CYCGRG 1 cut(s) 1276
BmgT120I GGNCC 3 cut(s) 1072, 1190, 1260
BmrFI CCNGG 3 cut(s) 794, 1277, 1278
BmsI GCATC 5 cut(s) 653, 694, 845, 859, 1088
BpiI GAAGAC 2 cut(s) 473, 1113
BpuEI CTTGAG 3 cut(s) 125, 677, 1234
BpuMI CCSGG 3 cut(s) 794, 1277, 1278
Bsa29I ATCGAT 3 cut(s) 111, 853, 1226
BsaJI CCNNGG 3 cut(s) 1275, 1276, 1277
BsaWI WCCGGW 2 cut(s) 678, 1169
Bsc4I CCNNNNNNNGG 3 cut(s) 1130, 1131, 1199
Bse1I ACTGG 1 cut(s) 606
Bse3DI GCAATG 2 cut(s) 984, 1269
BseAI TCCGGA 1 cut(s) 1169
BseCI ATCGAT 3 cut(s) 111, 853, 1226
BseDI CCNNGG 3 cut(s) 1275, 1276, 1277
BseGI GGATG 3 cut(s) 175, 417, 789
BseLI CCNNNNNNNGG 3 cut(s) 1130, 1131, 1199
BseMI GCAATG 2 cut(s) 984, 1269
BseMII CTCAG 2 cut(s) 948, 1311
BseNI ACTGG 1 cut(s) 606
BseRI GAGGAG 1 cut(s) 893
BseXI GCAGC 2 cut(s) 197, 547
BshFI GGCC 2 cut(s) 156, 755
BshVI ATCGAT 3 cut(s) 111, 853, 1226
BsiHKCI CYCGRG 1 cut(s) 1276
BsiSI CCGG 4 cut(s) 679, 793, 1170, 1277
BslFI GGGAC 2 cut(s) 809, 1043
BslI CCNNNNNNNGG 3 cut(s) 1130, 1131, 1199
BsmAI GTCTC 1 cut(s) 1054
BsmFI GGGAC 2 cut(s) 809, 1043
BsnI GGCC 2 cut(s) 156, 755
BsoBI CYCGRG 1 cut(s) 1276
Bsp13I TCCGGA 1 cut(s) 1169
Bsp143I GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
BspANI GGCC 2 cut(s) 156, 755
BspCNI CTCAG 2 cut(s) 949, 1310
BspDI ATCGAT 3 cut(s) 111, 853, 1226
BspEI TCCGGA 1 cut(s) 1169
BspMAI CTGCAG 1 cut(s) 565
BspPI GGATC 1 cut(s) 993
BsrDI GCAATG 2 cut(s) 984, 1269
BsrI ACTGG 1 cut(s) 606
BssECI CCNNGG 3 cut(s) 1275, 1276, 1277
BssMI GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
Bst4CI ACNGT 7 cut(s) 149, 188, 266, 337, 353, 370, 479
BstC8I GCNNGC 1 cut(s) 208
BstDEI CTNAG 5 cut(s) 536, 923, 957, 1083, 1297
BstF5I GGATG 3 cut(s) 175, 417, 789
BstKTI GATC 9 cut(s) 23, 111, 115, 394, 988, 1068, 1226, 1230, 1269
BstMAI GTCTC 1 cut(s) 1054
BstMBI GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
BstMWI GCNNNNNNNGC 2 cut(s) 395, 1280
BstNSI RCATGY 2 cut(s) 29, 1027
BstSCI CCNGG 3 cut(s) 792, 1275, 1276
BstSFI CTRYAG 2 cut(s) 561, 708
BstV1I GCAGC 2 cut(s) 197, 547
BstV2I GAAGAC 2 cut(s) 473, 1113
Bsu15I ATCGAT 3 cut(s) 111, 853, 1226
BsuI GTATCC 1 cut(s) 349
BsuRI GGCC 2 cut(s) 156, 755
BsuTUI ATCGAT 3 cut(s) 111, 853, 1226
BtsCI GGATG 3 cut(s) 175, 417, 789
BtsI GCAGTG 2 cut(s) 36, 1013
BtsIMutI CAGTG 5 cut(s) 36, 154, 366, 613, 1013
Cac8I GCNNGC 1 cut(s) 208
Cfr13I GGNCC 3 cut(s) 1072, 1190, 1260
Cfr9I CCCGGG 1 cut(s) 1276
ClaI ATCGAT 3 cut(s) 111, 853, 1226
Csp6I GTAC 1 cut(s) 910
CviAII CATG 8 cut(s) 26, 325, 449, 599, 757, 1024, 1069, 1204
CviQI GTAC 1 cut(s) 910
DdeI CTNAG 5 cut(s) 536, 923, 957, 1083, 1297
DpnI GATC 9 cut(s) 22, 110, 114, 393, 987, 1067, 1225, 1229, 1268
DpnII GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
DraIII CACNNNGTG 1 cut(s) 370
Eco47I GGWCC 3 cut(s) 1072, 1190, 1260
Eco57I CTGAAG 2 cut(s) 467, 947
Eco88I CYCGRG 1 cut(s) 1276
EcoO109I RGGNCCY 1 cut(s) 1190
FaeI CATG 8 cut(s) 29, 328, 452, 602, 760, 1027, 1072, 1207
FaqI GGGAC 2 cut(s) 809, 1043
FatI CATG 8 cut(s) 25, 324, 448, 598, 756, 1023, 1068, 1203
FauNDI CATATG 1 cut(s) 825
Fnu4HI GCNGC 2 cut(s) 211, 561
FokI GGATG 3 cut(s) 182, 404, 776
Fsp4HI GCNGC 2 cut(s) 211, 561
FspBI CTAG 2 cut(s) 515, 1221
GluI GCNGC 2 cut(s) 211, 561
HaeIII GGCC 2 cut(s) 156, 755
HapII CCGG 4 cut(s) 679, 793, 1170, 1277
Hin1II CATG 8 cut(s) 29, 328, 452, 602, 760, 1027, 1072, 1207
HinfI GANTC 4 cut(s) 527, 1109, 1166, 1295
HpaII CCGG 4 cut(s) 679, 793, 1170, 1277
HphI GGTGA 2 cut(s) 752, 1146
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 4 cut(s) 139, 457, 486, 1264
Hpy188III TCNNGA 7 cut(s) 421, 620, 698, 782, 1170, 1221, 1251
Hpy8I GTNNAC 1 cut(s) 191
HpyAV CCTTC 5 cut(s) 235, 634, 680, 1081, 1136
HpyCH4III ACNGT 7 cut(s) 149, 188, 266, 337, 353, 370, 479
HpyCH4IV ACGT 1 cut(s) 908
HpyF10VI GCNNNNNNNGC 2 cut(s) 395, 1280
HpyF3I CTNAG 5 cut(s) 536, 923, 957, 1083, 1297
HpySE526I ACGT 1 cut(s) 908
Hsp92II CATG 8 cut(s) 29, 328, 452, 602, 760, 1027, 1072, 1207
Kpn2I TCCGGA 1 cut(s) 1169
Kzo9I GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
LmnI GCTCC 1 cut(s) 1147
Lsp1109I GCAGC 2 cut(s) 197, 547
LweI GCATC 5 cut(s) 653, 694, 845, 859, 1088
MaeI CTAG 2 cut(s) 515, 1221
MaeII ACGT 1 cut(s) 908
MaeIII GTNAC 2 cut(s) 674, 890
MalI GATC 9 cut(s) 22, 110, 114, 393, 987, 1067, 1225, 1229, 1268
MboI GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
MboII GAAGA 5 cut(s) 473, 854, 1115, 1118, 1222
MfeI CAATTG 1 cut(s) 500
MluCI AATT 6 cut(s) 38, 275, 310, 500, 744, 817
MlyI GAGTC 2 cut(s) 1103, 1289
MmeI TCCRAC 1 cut(s) 715
MroI TCCGGA 1 cut(s) 1169
MroXI GAANNNNTTC 1 cut(s) 615
MseI TTAA 5 cut(s) 41, 164, 183, 816, 996
MslI CAYNNNNRTG 1 cut(s) 699
MspI CCGG 4 cut(s) 679, 793, 1170, 1277
MspR9I CCNGG 3 cut(s) 794, 1277, 1278
MunI CAATTG 1 cut(s) 500
MwoI GCNNNNNNNGC 2 cut(s) 395, 1280
NciI CCSGG 3 cut(s) 794, 1277, 1278
NdeI CATATG 1 cut(s) 825
NdeII GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
NlaIII CATG 8 cut(s) 29, 328, 452, 602, 760, 1027, 1072, 1207
NspI RCATGY 2 cut(s) 29, 1027
PciI ACATGT 1 cut(s) 1023
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 2 cut(s) 527, 1166
PflFI GACNNNGTC 1 cut(s) 1298
PfoI TCCNGGA 1 cut(s) 792
PkrI GCNGC 2 cut(s) 212, 562
PleI GAGTC 2 cut(s) 1103, 1289
PpsI GAGTC 2 cut(s) 1103, 1289
PpuMI RGGWCCY 1 cut(s) 1190
PscI ACATGT 1 cut(s) 1023
Psp5II RGGWCCY 1 cut(s) 1190
PspPI GGNCC 3 cut(s) 1072, 1190, 1260
PspPPI RGGWCCY 1 cut(s) 1190
PstI CTGCAG 1 cut(s) 565
PsyI GACNNNGTC 1 cut(s) 1298
RsaI GTAC 1 cut(s) 911
RsaNI GTAC 1 cut(s) 910
RseI CAYNNNNRTG 1 cut(s) 699
SaqAI TTAA 5 cut(s) 41, 164, 183, 816, 996
SatI GCNGC 2 cut(s) 211, 561
Sau3AI GATC 9 cut(s) 20, 108, 112, 391, 985, 1065, 1223, 1227, 1266
Sau96I GGNCC 3 cut(s) 1072, 1190, 1260
SchI GAGTC 2 cut(s) 1103, 1289
ScrFI CCNGG 3 cut(s) 794, 1277, 1278
SfaNI GCATC 5 cut(s) 653, 694, 845, 859, 1088
SfcI CTRYAG 2 cut(s) 561, 708
SinI GGWCC 3 cut(s) 1072, 1190, 1260
SmaI CCCGGG 1 cut(s) 1278
SmiMI CAYNNNNRTG 1 cut(s) 699
SmlI CTYRAG 3 cut(s) 104, 656, 1249
SmoI CTYRAG 3 cut(s) 104, 656, 1249
Sse9I AATT 6 cut(s) 38, 275, 310, 500, 744, 817
SspI AATATT 2 cut(s) 181, 589
SspMI CTAG 2 cut(s) 515, 1221
StyD4I CCNGG 3 cut(s) 792, 1275, 1276
TaaI ACNGT 7 cut(s) 149, 188, 266, 337, 353, 370, 479
TaiI ACGT 1 cut(s) 911
TaqI TCGA 6 cut(s) 111, 394, 834, 853, 988, 1226
TasI AATT 6 cut(s) 38, 275, 310, 500, 744, 817
TfiI GAWTC 2 cut(s) 527, 1166
Tru1I TTAA 5 cut(s) 41, 164, 183, 816, 996
Tru9I TTAA 5 cut(s) 41, 164, 183, 816, 996
TscAI CASTG 5 cut(s) 36, 154, 373, 613, 1020
TseI GCWGC 2 cut(s) 210, 560
TspDTI ATGAA 3 cut(s) 585, 615, 819
TspMI CCCGGG 1 cut(s) 1276
TspRI CASTG 5 cut(s) 36, 154, 373, 613, 1020
Tth111I GACNNNGTC 1 cut(s) 1298
VpaK11BI GGWCC 3 cut(s) 1072, 1190, 1260
XapI RAATTY 1 cut(s) 744
XbaI TCTAGA 1 cut(s) 1220
XceI RCATGY 2 cut(s) 29, 1027
XcmI CCANNNNNNNNNTGG 1 cut(s) 428
XmaI CCCGGG 1 cut(s) 1276
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 2 cut(s) 515, 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.