Rmu_sc0000031.1_g000013

Cell division

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000031.1
Physical Location & Seq
Forward (+)
72609 .. 72929
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000031.1_g000013.1.cds

Sequence Viewer

Length: 207 bp
atgaccgataaagctgaatcgtccgaccctaaggggaccaagagggatttcagctctgcgattctcgagcggaagaaggtagcgaatcgccttgtcgtcgatgaggctgtcaatgatgtcaactttgtcatcgcgctccaccttgaaaccatagagaagctccagctctttaggggcgacacaatcctcatcaaggtgcaattttga

Protein Analysis

68

Amino Acids

7.7

Weight (kDa)

6.56

Isoelectric Point (pI)

20.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000528)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49650
fragaria_vesca FvH4_1g18770 FvH4_1g18770 FvH4_7g34230
malus_domestica MD01G1046900.v1.1 MD15G1305400.v1.1 MD16G1282300.v1.1
prunus_persica Prupe.6G211700_v2.0.a1 Prupe.6G211700_v2.0.a1
pyrus_communis pycom01g07280 pycom15g26860 pycom16g25190 pycom16g25200
rosa_chinensis RchiOBHm_Chr1g0351151 RchiOBHm_Chr2g0109641 RchiOBHm_Chr4g0386971 RchiOBHm_Chr4g0413031 RchiOBHm_Chr4g0429541
rosa_laevigata RLG00000007037 RLG00000009264 RLG00000009427 RLG00000015442 RLG00000017752 RLG00000017990 RLG00000022570 RLG00000028427
rosa_multiflora Rmu_sc0000031.1_g000013 Rmu_sc0000332.1_g000058 Rmu_sc0000346.1_g000014 Rmu_sc0000698.1_g000147 Rmu_sc0001152.1_g000047 Rmu_sc0001494.1_g000003 Rmu_sc0002254.1_g000001 Rmu_sc0002531.1_g000001 Rmu_sc0002717.1_g000016 Rmu_sc0002717.1_g000017 Rmu_sc0003220.1_g000024 Rmu_sc0005016.1_g000007 Rmu_sc0005608.1_g000020 Rmu_sc0010686.1_g000003 Rmu_sc0011012.1_g000011 Rmu_sc0021503.1_g000001
rosa_roxburghii Rroxscaffold_2G00082300 Rroxscaffold_2G00099190 Rroxscaffold_2G00129660 Rroxscaffold_2G00134070 Rroxscaffold_3G00236170 Rroxscaffold_5G00346460 Rroxscaffold_7G00156600 Rroxscaffold_7G00205430
rosa_rugosa Rorug01G0267800 Rorug02G0020700 Rorug02G0020700 Rorug02G0161500 Rorug02G0384900 Rorug05G0567000
rosa_samantha Rh1AG062400 Rh1AG132200 Rh1AG231500 Rh1CG126100 Rh1CG184600 Rh1CG215600 Rh1CG237400 Rh2AG213700 Rh2BG068400 Rh2BG224100 Rh2BG239600 Rh2CG069600 Rh2CG216000 Rh2CG585300 Rh2DG067600 Rh2DG219200 Rh4AG177200 Rh5AG509600 Rh5BG290500 Rh5BG328900 Rh5DG300300 Rh5DG340100 Rh6BG103200 Rh7DG421500
rosa_wichuraiana Rw1G006030 Rw1G006580 Rw2G006320 Rw5G004390 Rw5G029130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 70
AccII CGCG 1 cut(s) 134
AciI CCGC 1 cut(s) 70
AfiI CCNNNNNNNGG 1 cut(s) 193
AgsI TTSAA 1 cut(s) 146
AjuI GAANNNNNNNTTGG 2 cut(s) 32, 64
AluBI AGCT 4 cut(s) 14, 54, 160, 166
AluI AGCT 4 cut(s) 14, 54, 160, 166
Ama87I CYCGRG 1 cut(s) 65
AspLEI GCGC 1 cut(s) 136
AspS9I GGNCC 1 cut(s) 36
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 1 cut(s) 36
AxyI CCTNAGG 1 cut(s) 30
Bme18I GGWCC 1 cut(s) 36
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 1 cut(s) 36
BmiI GGNNCC 1 cut(s) 37
BpmI CTGGAG 1 cut(s) 146
Bsc4I CCNNNNNNNGG 1 cut(s) 193
Bse21I CCTNAGG 1 cut(s) 30
BseLI CCNNNNNNNGG 1 cut(s) 193
Bsh1236I CGCG 1 cut(s) 134
BsiHKCI CYCGRG 1 cut(s) 65
BslFI GGGAC 1 cut(s) 49
BslI CCNNNNNNNGG 1 cut(s) 193
BsmFI GGGAC 1 cut(s) 49
BsoBI CYCGRG 1 cut(s) 65
BspACI CCGC 1 cut(s) 70
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 1 cut(s) 37
BsrBI CCGCTC 1 cut(s) 70
BstDEI CTNAG 1 cut(s) 30
BstENI CCTNNNNNAGG 1 cut(s) 191
BstFNI CGCG 1 cut(s) 134
BstHHI GCGC 1 cut(s) 136
BstUI CGCG 1 cut(s) 134
Bsu36I CCTNAGG 1 cut(s) 30
BtgZI GCGATG 1 cut(s) 115
CfoI GCGC 1 cut(s) 136
Cfr13I GGNCC 1 cut(s) 36
CviJI RGCY 5 cut(s) 14, 54, 107, 160, 166
CviKI_1 RGCY 5 cut(s) 14, 54, 107, 160, 166
DdeI CTNAG 1 cut(s) 30
Eco47I GGWCC 1 cut(s) 36
Eco81I CCTNAGG 1 cut(s) 30
Eco88I CYCGRG 1 cut(s) 65
EcoNI CCTNNNNNAGG 1 cut(s) 191
FaiI YATR 1 cut(s) 152
FaqI GGGAC 1 cut(s) 49
GlaI GCGC 1 cut(s) 135
GsuI CTGGAG 1 cut(s) 146
HhaI GCGC 1 cut(s) 136
Hin6I GCGC 1 cut(s) 134
HinP1I GCGC 1 cut(s) 134
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HinfI GANTC 3 cut(s) 17, 61, 85
Hpy166II GTNNAC 1 cut(s) 121
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 1 cut(s) 65
Hpy8I GTNNAC 1 cut(s) 121
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 199
HpyF3I CTNAG 1 cut(s) 30
HspAI GCGC 1 cut(s) 134
LmnI GCTCC 2 cut(s) 141, 165
LpnPI CCDG 1 cut(s) 176
MbiI CCGCTC 1 cut(s) 70
MboII GAAGA 1 cut(s) 85
MluCI AATT 1 cut(s) 200
MmeI TCCRAC 1 cut(s) 48
MnlI CCTC 3 cut(s) 36, 97, 197
MslI CAYNNNNRTG 1 cut(s) 194
MvnI CGCG 1 cut(s) 134
NlaIV GGNNCC 1 cut(s) 37
PaeR7I CTCGAG 1 cut(s) 65
PfeI GAWTC 3 cut(s) 17, 61, 85
PspN4I GGNNCC 1 cut(s) 37
PspPI GGNCC 1 cut(s) 36
RseI CAYNNNNRTG 1 cut(s) 194
Sau96I GGNCC 1 cut(s) 36
SetI ASST 7 cut(s) 16, 56, 81, 144, 162, 168, 198
Sfr274I CTCGAG 1 cut(s) 65
SgeI CNNG 7 cut(s) 52, 77, 79, 104, 145, 155, 175
SinI GGWCC 1 cut(s) 36
SlaI CTCGAG 1 cut(s) 65
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
Sse9I AATT 1 cut(s) 200
SsiI CCGC 1 cut(s) 70
TaqI TCGA 2 cut(s) 66, 99
TaqII GACCGA 1 cut(s) 20
TasI AATT 1 cut(s) 200
TfiI GAWTC 3 cut(s) 17, 61, 85
VpaK11BI GGWCC 1 cut(s) 36
XagI CCTNNNNNAGG 1 cut(s) 191
XhoI CTCGAG 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.