Rorug02G0161500
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
14443401 .. 14445384
1984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0161500.1

Sequence Viewer

Length: 1365 bp
ATGAGTTCTCCTTGCTGGAAAATTGATCAGCAACCAAAATTTTCTGCTACGCCTCTCAGCTTTCATAAGTCCATTTCGGAGAACACTCACAGAGACAATAATCTTAGAGTTCCAAGGAGTTATGTGAAGAAATATGAGAAGAAATATGGAGAAGAGCTATCAAATATCGTACATCTTAAGCTTCCATGTGGTACAGAATGGGAAATAGAAGTCACAAGACATAATGGTGTCTTTTGGTTCGACAAGGGTTGGGAAACCTTTAGCAAGTTTTACTCCATCGAGTCTCGCTACTCGCTAGTTTTTCAATATGAAGGGAATTCTAGATTCAAAGTTAACATATTTGATAGAACAAACTCAGAGATTGAGTATCCTATCAAAACCCCGAAGAAGGAAGAAAATGATGTAGATGATCAATTTCCACCGGCTAGTCATCTGCTGCCTCAAAAGAACAATATAGCAAGTTCAAATGGTGACAAAAAGGATCTTCCTGCGGAAGTAGATGAGGGAGACAAGTATAGTAGTACTCAAAGATCACAAAAACCAACAACTGAGGTTCTTGGGAGGATGCACCCTTCGACTACAAGAGGAAGTGGAGCTGTACAGACAGTTAAAGAATTCAAGTACACTGAGCAGCCTTCTTGTTTTTTGGTTCCTATGTGCCCCTCTTATATCGAAAAACATATGCTTTGGCTGCCAAGTGACTTTGCCATGCATTTGAAACATCTTATTACGAATTCTGGTAATCTTACCCTTCATGTTTCGGAAGGGAGCACAACGAGAACTTGGACTGTTGGAATGAAATATGAAAAAGAAAGAGCGAAATTCCAGTCTGGATGGAGTGAATTTGTGCAAGGCAATAAACTGAATCATGGTGATGTGTGTGACCTCATGTTAATTGACAAAAATGAACTTTTATTTGAAGTTAAGATTTTCCGAGCAAGAGAAGCTGTGGATTGCACCTTCTCACCGGATATTGATGAAGCTGATGCACATCACGAGCATGATGATGACAATGGTGATAATGATGCTGCTCATGACAATCGTTCATTCACAATTATCATACGACAGTCTTATACTACTCGTTTGCCAGTGCCTGCTAAGTTCCACAAACATGTTACTAAGAAGCCTGATACCGCTAACCTGAGTCTTCCCAGTGGGAGGAGAACTTGGCCTATTTCATTGAAATATGAGGTTTCAACAGAAAGAGTCAGATTCCAGTCCGGTTGGAGCAAGTTTGTACGAGACAATCATTTGAAAGTTGGAGATGCGTGTGAGTTTGTGTTGACTGATGAAACTAGACTTTCATTTGAAGTTCATATAGAAGCTGCTAAATGCACCTTGCCAGGTAAGTCCCTTAACTTTTGA

Protein Analysis

454

Amino Acids

52.3

Weight (kDa)

6.69

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 26 - 116 2.6e-12 B3 DNA binding domain
B3 PF02362 215 - 313 2.2e-14 B3 DNA binding domain
B3 PF02362 359 - 440 1.4e-13 B3 DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000528)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49650
fragaria_vesca FvH4_1g18770 FvH4_1g18770 FvH4_7g34230
malus_domestica MD01G1046900.v1.1 MD15G1305400.v1.1 MD16G1282300.v1.1
prunus_persica Prupe.6G211700_v2.0.a1 Prupe.6G211700_v2.0.a1
pyrus_communis pycom01g07280 pycom15g26860 pycom16g25190 pycom16g25200
rosa_chinensis RchiOBHm_Chr1g0351151 RchiOBHm_Chr2g0109641 RchiOBHm_Chr4g0386971 RchiOBHm_Chr4g0413031 RchiOBHm_Chr4g0429541
rosa_laevigata RLG00000007037 RLG00000009264 RLG00000009427 RLG00000015442 RLG00000017752 RLG00000017990 RLG00000022570 RLG00000028427
rosa_multiflora Rmu_sc0000031.1_g000013 Rmu_sc0000332.1_g000058 Rmu_sc0000346.1_g000014 Rmu_sc0000698.1_g000147 Rmu_sc0001152.1_g000047 Rmu_sc0001494.1_g000003 Rmu_sc0002254.1_g000001 Rmu_sc0002531.1_g000001 Rmu_sc0002717.1_g000016 Rmu_sc0002717.1_g000017 Rmu_sc0003220.1_g000024 Rmu_sc0005016.1_g000007 Rmu_sc0005608.1_g000020 Rmu_sc0010686.1_g000003 Rmu_sc0011012.1_g000011 Rmu_sc0021503.1_g000001
rosa_roxburghii Rroxscaffold_2G00082300 Rroxscaffold_2G00099190 Rroxscaffold_2G00129660 Rroxscaffold_2G00134070 Rroxscaffold_3G00236170 Rroxscaffold_5G00346460 Rroxscaffold_7G00156600 Rroxscaffold_7G00205430
rosa_rugosa Rorug01G0267800 Rorug02G0020700 Rorug02G0020700 Rorug02G0161500 Rorug02G0384900 Rorug05G0567000
rosa_samantha Rh1AG062400 Rh1AG132200 Rh1AG231500 Rh1CG126100 Rh1CG184600 Rh1CG215600 Rh1CG237400 Rh2AG213700 Rh2BG068400 Rh2BG224100 Rh2BG239600 Rh2CG069600 Rh2CG216000 Rh2CG585300 Rh2DG067600 Rh2DG219200 Rh4AG177200 Rh5AG509600 Rh5BG290500 Rh5BG328900 Rh5DG300300 Rh5DG340100 Rh6BG103200 Rh7DG421500
rosa_wichuraiana Rw1G006030 Rw1G006580 Rw2G006320 Rw5G004390 Rw5G029130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 491, 1134
AclWI GGATC 1 cut(s) 489
AcsI RAATTY 6 cut(s) 38, 316, 614, 733, 821, 842
AfaI GTAC 6 cut(s) 171, 193, 523, 600, 623, 1239
AfiI CCNNNNNNNGG 2 cut(s) 388, 1158
AflII CTTAAG 1 cut(s) 176
AflIII ACRYGT 1 cut(s) 1111
AjnI CCWGG 1 cut(s) 1342
AluBI AGCT 7 cut(s) 60, 157, 181, 596, 947, 983, 1325
AluI AGCT 7 cut(s) 60, 157, 181, 596, 947, 983, 1325
Alw21I GWGCWC 1 cut(s) 773
Alw26I GTCTC 4 cut(s) 87, 288, 501, 1236
AlwI GGATC 1 cut(s) 489
AlwNI CAGNNNCTG 1 cut(s) 1094
AoxI GGCC 1 cut(s) 1169
ApeKI GCWGC 5 cut(s) 436, 631, 691, 1028, 1325
ApoI RAATTY 6 cut(s) 38, 316, 614, 733, 821, 842
ArsI GACNNNNNNTTYG 2 cut(s) 812, 844
AsuHPI GGTGA 4 cut(s) 482, 884, 957, 1028
BaeGI GKGCMC 1 cut(s) 662
BauI CACGAG 1 cut(s) 995
BbsI GAAGAC 1 cut(s) 1139
Bbv12I GWGCWC 1 cut(s) 773
BbvI GCAGC 5 cut(s) 423, 643, 678, 1015, 1312
BccI CCATC 2 cut(s) 284, 828
BciT130I CCWGG 1 cut(s) 1344
BciVI GTATCC 1 cut(s) 378
BclI TGATCA 2 cut(s) 25, 409
BcoDI GTCTC 4 cut(s) 87, 288, 501, 1236
BfaI CTAG 4 cut(s) 296, 321, 426, 1296
BfrI CTTAAG 1 cut(s) 176
BfuI GTATCC 1 cut(s) 378
BisI GCNGC 5 cut(s) 437, 632, 692, 1029, 1326
BlsI GCNGC 5 cut(s) 438, 633, 693, 1030, 1327
BmcAI AGTACT 1 cut(s) 523
Bme1390I CCNGG 1 cut(s) 1344
BmiI GGNNCC 1 cut(s) 651
BmrFI CCNGG 1 cut(s) 1344
BmrI ACTGGG 1 cut(s) 1146
BmsI GCATC 4 cut(s) 555, 976, 1015, 1255
BmuI ACTGGG 1 cut(s) 1146
BpiI GAAGAC 1 cut(s) 1139
BsaBI GATNNNNATC 1 cut(s) 990
BsaJI CCNNGG 1 cut(s) 113
BsaWI WCCGGW 2 cut(s) 967, 1220
Bsc4I CCNNNNNNNGG 2 cut(s) 388, 1158
Bse118I RCCGGY 1 cut(s) 421
Bse1I ACTGG 4 cut(s) 826, 1088, 1152, 1216
Bse8I GATNNNNATC 1 cut(s) 990
BseBI CCWGG 1 cut(s) 1344
BseDI CCNNGG 1 cut(s) 113
BseGI GGATG 2 cut(s) 570, 839
BseJI GATNNNNATC 1 cut(s) 990
BseLI CCNNNNNNNGG 2 cut(s) 388, 1158
BseMII CTCAG 5 cut(s) 70, 369, 540, 618, 1133
BseNI ACTGG 4 cut(s) 826, 1088, 1152, 1216
BseRI GAGGAG 1 cut(s) 1174
BseSI GKGCMC 1 cut(s) 662
BseXI GCAGC 5 cut(s) 423, 643, 678, 1015, 1312
BshFI GGCC 1 cut(s) 1171
BsiHKAI GWGCWC 1 cut(s) 773
BsiSI CCGG 3 cut(s) 422, 968, 1221
BslFI GGGAC 1 cut(s) 1336
BslI CCNNNNNNNGG 2 cut(s) 388, 1158
BsmAI GTCTC 4 cut(s) 87, 288, 501, 1236
BsmFI GGGAC 1 cut(s) 1336
BsnI GGCC 1 cut(s) 1171
Bsp1286I GDGCHC 2 cut(s) 662, 773
Bsp1407I TGTACA 1 cut(s) 598
Bsp143I GATC 4 cut(s) 25, 409, 481, 530
BspACI CCGC 2 cut(s) 491, 1134
BspANI GGCC 1 cut(s) 1171
BspCNI CTCAG 5 cut(s) 69, 368, 541, 619, 1134
BspHI TCATGA 1 cut(s) 1033
BspLI GGNNCC 1 cut(s) 651
BspPI GGATC 1 cut(s) 489
BspQI GCTCTTC 1 cut(s) 147
BspTI CTTAAG 1 cut(s) 176
BsrFI RCCGGY 1 cut(s) 421
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 4 cut(s) 826, 1088, 1152, 1216
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 4 cut(s) 25, 409, 481, 530
BssSI CACGAG 1 cut(s) 995
BssT1I CCWWGG 1 cut(s) 113
Bst2BI CACGAG 1 cut(s) 995
Bst2UI CCWGG 1 cut(s) 1344
Bst4CI ACNGT 3 cut(s) 607, 790, 1068
Bst6I CTCTTC 1 cut(s) 147
BstAFI CTTAAG 1 cut(s) 176
BstAUI TGTACA 1 cut(s) 598
BstC8I GCNNGC 1 cut(s) 1095
BstDEI CTNAG 8 cut(s) 56, 104, 355, 549, 627, 1098, 1119, 1142
BstF5I GGATG 2 cut(s) 570, 839
BstKTI GATC 4 cut(s) 28, 412, 484, 533
BstMAI GTCTC 4 cut(s) 87, 288, 501, 1236
BstMBI GATC 4 cut(s) 25, 409, 481, 530
BstMWI GCNNNNNNNGC 2 cut(s) 691, 944
BstNI CCWGG 1 cut(s) 1344
BstNSI RCATGY 1 cut(s) 1115
BstSCI CCNGG 1 cut(s) 1342
BstSLI GKGCMC 1 cut(s) 662
BstV1I GCAGC 5 cut(s) 423, 643, 678, 1015, 1312
BstV2I GAAGAC 1 cut(s) 1139
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
BsuI GTATCC 1 cut(s) 378
BsuRI GGCC 1 cut(s) 1171
BtsCI GGATG 2 cut(s) 570, 839
BtsIMutI CAGTG 3 cut(s) 624, 1095, 1159
Cac8I GCNNGC 1 cut(s) 1095
CaiI CAGNNNCTG 1 cut(s) 1094
CciI TCATGA 1 cut(s) 1033
Cfr10I RCCGGY 1 cut(s) 421
Csp6I GTAC 6 cut(s) 170, 192, 522, 599, 622, 1238
CviAII CATG 8 cut(s) 186, 709, 755, 869, 889, 1001, 1034, 1112
CviQI GTAC 6 cut(s) 170, 192, 522, 599, 622, 1238
DdeI CTNAG 8 cut(s) 56, 104, 355, 549, 627, 1098, 1119, 1142
DpnI GATC 4 cut(s) 27, 411, 483, 532
DpnII GATC 4 cut(s) 25, 409, 481, 530
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
Eco130I CCWWGG 1 cut(s) 113
EcoRI GAATTC 3 cut(s) 316, 614, 733
EcoRII CCWGG 1 cut(s) 1342
EcoT14I CCWWGG 1 cut(s) 113
EcoT22I ATGCAT 1 cut(s) 714
ErhI CCWWGG 1 cut(s) 113
FaeI CATG 8 cut(s) 189, 712, 758, 872, 892, 1004, 1037, 1115
FaqI GGGAC 1 cut(s) 1336
FatI CATG 8 cut(s) 185, 708, 754, 868, 888, 1000, 1033, 1111
FauNDI CATATG 1 cut(s) 681
FbaI TGATCA 2 cut(s) 25, 409
Fnu4HI GCNGC 5 cut(s) 437, 632, 692, 1029, 1326
FokI GGATG 2 cut(s) 577, 846
Fsp4HI GCNGC 5 cut(s) 437, 632, 692, 1029, 1326
FspBI CTAG 4 cut(s) 296, 321, 426, 1296
GluI GCNGC 5 cut(s) 437, 632, 692, 1029, 1326
HaeIII GGCC 1 cut(s) 1171
HapII CCGG 3 cut(s) 422, 968, 1221
Hin1II CATG 8 cut(s) 189, 712, 758, 872, 892, 1004, 1037, 1115
HincII GTYRAC 2 cut(s) 334, 1284
HindII GTYRAC 2 cut(s) 334, 1284
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 6 cut(s) 281, 324, 865, 1144, 1206, 1212
HpaI GTTAAC 1 cut(s) 334
HpaII CCGG 3 cut(s) 422, 968, 1221
HphI GGTGA 4 cut(s) 482, 884, 957, 1028
Hpy166II GTNNAC 3 cut(s) 334, 624, 1284
Hpy188I TCNGA 5 cut(s) 79, 358, 763, 935, 1211
Hpy188III TCNNGA 4 cut(s) 321, 831, 995, 1034
Hpy8I GTNNAC 3 cut(s) 334, 624, 1284
HpyAV CCTTC 7 cut(s) 305, 382, 582, 645, 758, 761, 970
HpyCH4III ACNGT 3 cut(s) 607, 790, 1068
HpyCH4V TGCA 6 cut(s) 568, 712, 850, 957, 989, 1335
HpyF10VI GCNNNNNNNGC 2 cut(s) 691, 944
HpyF3I CTNAG 8 cut(s) 56, 104, 355, 549, 627, 1098, 1119, 1142
Hsp92II CATG 8 cut(s) 189, 712, 758, 872, 892, 1004, 1037, 1115
Ksp22I TGATCA 2 cut(s) 25, 409
KspAI GTTAAC 1 cut(s) 334
Kzo9I GATC 4 cut(s) 25, 409, 481, 530
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 3 cut(s) 593, 768, 1227
Lsp1109I GCAGC 5 cut(s) 423, 643, 678, 1015, 1312
LweI GCATC 4 cut(s) 555, 976, 1015, 1255
MaeI CTAG 4 cut(s) 296, 321, 426, 1296
MaeIII GTNAC 5 cut(s) 211, 470, 698, 881, 1114
MalI GATC 4 cut(s) 27, 411, 483, 532
MboI GATC 4 cut(s) 25, 409, 481, 530
MboII GAAGA 7 cut(s) 139, 151, 164, 397, 404, 476, 1139
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 2 cut(s) 662, 773
MlyI GAGTC 3 cut(s) 290, 1153, 1215
MmeI TCCRAC 3 cut(s) 772, 1205, 1240
Mph1103I ATGCAT 1 cut(s) 714
MseI TTAA 6 cut(s) 177, 333, 609, 893, 924, 1356
MslI CAYNNNNRTG 5 cut(s) 225, 873, 999, 1005, 1110
MspCI CTTAAG 1 cut(s) 176
MspI CCGG 3 cut(s) 422, 968, 1221
MspR9I CCNGG 1 cut(s) 1344
MvaI CCWGG 1 cut(s) 1344
MwoI GCNNNNNNNGC 2 cut(s) 691, 944
NdeI CATATG 1 cut(s) 681
NdeII GATC 4 cut(s) 25, 409, 481, 530
NlaIII CATG 8 cut(s) 189, 712, 758, 872, 892, 1004, 1037, 1115
NlaIV GGNNCC 1 cut(s) 651
NmuCI GTSAC 4 cut(s) 211, 470, 698, 881
NsiI ATGCAT 1 cut(s) 714
NspI RCATGY 1 cut(s) 1115
PagI TCATGA 1 cut(s) 1033
PciI ACATGT 1 cut(s) 1111
PciSI GCTCTTC 1 cut(s) 147
PfeI GAWTC 3 cut(s) 324, 865, 1212
PkrI GCNGC 5 cut(s) 438, 633, 693, 1030, 1327
PleI GAGTC 3 cut(s) 289, 1152, 1214
PpsI GAGTC 3 cut(s) 289, 1152, 1214
PscI ACATGT 1 cut(s) 1111
Psp6I CCWGG 1 cut(s) 1342
PspGI CCWGG 1 cut(s) 1342
PspN4I GGNNCC 1 cut(s) 651
PstNI CAGNNNCTG 1 cut(s) 1094
PsuI RGATCY 1 cut(s) 481
RsaI GTAC 6 cut(s) 171, 193, 523, 600, 623, 1239
RsaNI GTAC 6 cut(s) 170, 192, 522, 599, 622, 1238
RseI CAYNNNNRTG 5 cut(s) 225, 873, 999, 1005, 1110
SapI GCTCTTC 1 cut(s) 147
SaqAI TTAA 6 cut(s) 177, 333, 609, 893, 924, 1356
SatI GCNGC 5 cut(s) 437, 632, 692, 1029, 1326
Sau3AI GATC 4 cut(s) 25, 409, 481, 530
ScaI AGTACT 1 cut(s) 523
SchI GAGTC 3 cut(s) 290, 1153, 1215
ScrFI CCNGG 1 cut(s) 1344
SduI GDGCHC 2 cut(s) 662, 773
SfaNI GCATC 4 cut(s) 555, 976, 1015, 1255
SmiMI CAYNNNNRTG 5 cut(s) 225, 873, 999, 1005, 1110
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
SsiI CCGC 2 cut(s) 491, 1134
SspMI CTAG 4 cut(s) 296, 321, 426, 1296
StyD4I CCNGG 1 cut(s) 1342
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 3 cut(s) 607, 790, 1068
TaqI TCGA 4 cut(s) 240, 279, 575, 672
TatI WGTACW 3 cut(s) 521, 598, 621
TfiI GAWTC 3 cut(s) 324, 865, 1212
Tru1I TTAA 6 cut(s) 177, 333, 609, 893, 924, 1356
Tru9I TTAA 6 cut(s) 177, 333, 609, 893, 924, 1356
TscAI CASTG 3 cut(s) 631, 1095, 1159
TseFI GTSAC 4 cut(s) 211, 470, 698, 881
TseI GCWGC 5 cut(s) 436, 631, 691, 1028, 1325
Tsp45I GTSAC 4 cut(s) 211, 470, 698, 881
TspRI CASTG 3 cut(s) 631, 1095, 1159
Vha464I CTTAAG 1 cut(s) 176
XapI RAATTY 6 cut(s) 38, 316, 614, 733, 821, 842
XbaI TCTAGA 1 cut(s) 320
XceI RCATGY 1 cut(s) 1115
XspI CTAG 4 cut(s) 296, 321, 426, 1296
ZrmI AGTACT 1 cut(s) 523
Zsp2I ATGCAT 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.