RLG00000012572

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
19965692 .. 19972946
7255 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012572

Sequence Viewer

Length: 2328 bp
ATGGCTGGTGTTCTGGATACTACTTCCTGCACTTACCGGTGTCGTTATCATGCCTTCTTGAGTTTCAGGGGCGAAGATACACGCAAGGGCTTTAGTGATCATCTCTATAGAGCTTTGGAGTTGGCAGGAATTCACACTTTCAGAGATGATGATGAAATTGAGAGAGGAGCAAATATAGCTGCAGAGCTACATAAAGCTATACATGAGTCACGAGTAGCCATAATAGTCTTCTCTAATGACTATGCTTCCTCAAGTTGGTGCTTGGACGAACTTACCAAGATCATGGAACGTAAAAGGACCGATGGATATATGGTAGTGCCAGTTTTCTATAAGGTGGATCCATCTGTTGTTAGGTGGCAGATTGGGAGTTTTGCAGATGCATTTGCCATACATGAAAACCGCTTCAAGGAGGAGATCGGCAAGGTCGACAAGTGGAGAAAAGCTCTTAAAGATGTAGCCGATCTAGGAGGGATGGTCTTAGGAGATCAGTACGAATCACAGCTCATCCAAAATATTGTTGACGAGATTGAAAAAAAAATGGATCCCATTACATTAAATGTTGCTCCATATGCTGTTGGAATAAATGCTCGTGTGGAAGACCTCAACATGTGGTTAAGAGATGGATCAGTTGATGTTGGTGTGGCTGGCATCTACGGGATGGGTGGAATTGGCAAGACCACTATTGCTAAAGCTGCTTATAATCTGAACCTGGATAGATTTGAAGGAAAAAGTTTTCTTGCAGATGTTAGAGCAACTACAGAACAACCTAATGGTTTGGTTCGCTTGCAGAGGAACCTTCTTTCAGATATCCAAAGGAGAAAAACAAAAAAGATAAACAGCGTGGATGAAGGTACAAGCAAAATCAAGAATTTTGTATGCTGCAAAAGAGTACTTATTGTTCTTGATGATGTGAACGACTTGGACCAGTTCAATGCGATTCTTGGAATGCGAGAGTGGTTTCATCCAGGAAGCAAGATTATCATAACAACTAGAGATAAACACTTGTTAATGGCTACTGGGGTTTCTAACATGTTCATGGTTCCAGAATTGGATCAGCATGAATCACTTCAGCTTTTCAGTTGGCATGCCTTCAGACAAGCTCATCCTATCGAAGGCTACATGGAGGTTTCAGCACTCATAGTAAAACACTGTGGAGGGCTACCGTTGGCCCTCCAAGTTCTGGGGTCTTCTCTATTTGGAAAAAGTGTACATGATTGGTACACTACATTAGAGAAGTTAGATGTGGTTCCTGATAGCAAAATTCAAAGAATTCTTAGAATAAGCTACGATTATCTACAAGATCATGATGACAAAACTTTATTCCTTCATATAGCATGTTTCTTCATAGGAAAGAAGAGAAACTTGACATTTACAGTACTGGACAGCCTTGAGTTTTTCACAGCAATTGGAGTTCAAAATCTAATTGATAGATGTCTACTGCAAACTAAGGACGGCAAGTTGATGATGCATCAATTAATCAGAGACATGGGAAGAGGAATTGTTCGCGAAGAATCAGTTGAGGACCCTGGAAAACGTAGTAGAGTGGTGCAAAAAGATGCCTATGATATTTTGAAAAACGCATCGATGCCCAATCTTCAACTTCTCCTGCTCAATAATGTAAAAGTCAGTGGTGGCTACGGAGAGTTTCCAAAAACACTAATATGGTTGTCTTGGCAAGGGTTCCCCTTGAAATCAATACCAGCCGATTTTTGTTTGAAAAATGTAGTTGCTCTTGAGTTGAAGCATAGCATCCTGCAAGTTGTTTGGAAGGGAACCAAGGGTCTTGTTAGAACCTCAGACTTGTCCGGACTCCCTAACCTTGAGAGATTAATTCTTAAAGATTGCATAAATATTGTCGAGATTGATGAATCCATCGGAGAACTTCAGAAACTTGTATTCTTGAATCTAAAAGACTGCAAAAATCTCGTGAAGCTTCCAAGAAGAATTAGCATGTTGAGATCTCTTCATGAGCTAATCCTTTCTGGCTGCTCAAAGCTTGGTGATAATGAGAAACTCGGTCTTTTATCAAATAAACCATGGCTATCAATCTGTTCGTGGGTATCACCAAGAAAAAGTCTTGAAGCAACCAGCAGCTTCTCATTGGCATATTTGCCACGGTCTTTAGGAAGCTTAAGTCTGGCTGATTGCAATCTATCAAAGATTTCCGATGATATTAGTGTTCTGTCCTCGTTGAAGCATCTGGATATAAGTGGCAATCCAATGCTTAGTCTTCCGGAGAGCATAAAGACTCTTACTATGCTTGAAACCCTTTTCTTAGGACAGTGCAACAAGCTCAAAATGATTCCAGAGCTCCCACCAAAAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

776

Amino Acids

87.35

Weight (kDa)

8.2

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 183 6.5e-52 TIR domain
TIR_2 PF13676 19 - 114 2.7e-16 TIR domain
NB-ARC PF00931 197 - 366 2.5e-20 NB-ARC domain
WHD_ROQ1 PF23282 435 - 505 9.4e-15 Disease resistance protein Roq1-like, winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000654)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g20301 FvH4_2g20310 FvH4_2g20310 FvH4_2g20700
malus_domestica MD07G1079200.v1.1 MD07G1079300.v1.1 MD07G1079400.v1.1 MD12G1024400.v1.1 MD15G1375000.v1.1 MD15G1375200.v1.1 MD15G1375500.v1.1 MD15G1376100.v1.1 MD15G1376200.v1.1 MD15G1376300.v1.1 MD17G1274300.v1.1 MD17G1275000.v1.1 MD17G1275400.v1.1 MD17G1275900.v1.1 MD17G1276000.v1.1 MD17G1276600.v1.1 MD17G1277700.v1.1
prunus_persica Prupe.2G101900_v2.0.a1 Prupe.2G101900_v2.0.a1 Prupe.2G101900_v2.0.a1 Prupe.2G101900_v2.0.a1 Prupe.2G101900_v2.0.a1 Prupe.3G009700_v2.0.a1 Prupe.3G010100_v2.0.a1 Prupe.3G010300_v2.0.a1 Prupe.3G130700_v2.0.a1 Prupe.3G130800_v2.0.a1 Prupe.3G130900_v2.0.a1
pyrus_communis pycom07g06290 pycom07g06320 pycom15g33580 pycom15g33620 pycom17g27240 pycom17g27360 pycom17g27390 pycom17g27400 pycom17g27410 pycom17g27450 pycom17g27530
rosa_chinensis RchiOBHm_Chr4g0405381 RchiOBHm_Chr6g0286441
rosa_laevigata RLG00000008845 RLG00000012572
rosa_multiflora Rmu_sc0000575.1_g000003 Rmu_sc0003585.1_g000001 Rmu_sc0027178.1_g000001 Rmu_sc0042065.1_g000001
rosa_roxburghii Rroxscaffold_4G00313580 Rroxscaffold_5G00349860 Rroxscaffold_7G00182360
rosa_rugosa Rorug01G0140300.1 Rorug01G0140400.1 Rorug04G0057900 Rorug04G0057900 Rorug04G0058000 Rorug04G0058100 Rorug04G0058200 Rorug06G0179200 Rorug06G0184100
rosa_samantha Rh4AG131500 Rh4BG126200 Rh4BG126300 Rh4CG138700 Rh4DG125600 Rh6AG292000 Rh6BG295500 Rh6BG300700 Rh6CG296200 Rh6DG288000
rosa_wichuraiana Rw1G013150 Rw1G013160 Rw4G010650 Rw6G025170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
AccB7I CCANNNNNTGG 1 cut(s) 1180
AccI GTMKAC 2 cut(s) 426, 1435
AccII CGCG 1 cut(s) 1506
AccIII TCCGGA 2 cut(s) 1805, 2233
AciI CCGC 1 cut(s) 400
AclWI GGATC 6 cut(s) 332, 345, 536, 549, 631, 1059
AcsI RAATTY 4 cut(s) 129, 868, 1260, 1269
AcuI CTGAAG 3 cut(s) 1052, 1075, 1868
AfaI GTAC 6 cut(s) 491, 853, 891, 1209, 1220, 1377
AfiI CCNNNNNNNGG 4 cut(s) 255, 406, 1112, 1180
AflII CTTAAG 1 cut(s) 2131
AflIII ACRYGT 2 cut(s) 606, 1029
AgeI ACCGGT 1 cut(s) 36
AjnI CCWGG 3 cut(s) 708, 964, 1525
Alw21I GWGCWC 1 cut(s) 2313
Alw26I GTCTC 1 cut(s) 1476
AlwI GGATC 6 cut(s) 332, 345, 536, 549, 631, 1059
Aor13HI TCCGGA 2 cut(s) 1805, 2233
AoxI GGCC 1 cut(s) 1167
ApeKI GCWGC 5 cut(s) 179, 692, 879, 1986, 2091
ApoI RAATTY 4 cut(s) 129, 868, 1260, 1269
AseI ATTAAT 2 cut(s) 1475, 1829
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 1065
AspS9I GGNCC 4 cut(s) 297, 922, 1168, 1522
AsuHPI GGTGA 2 cut(s) 2012, 2055
AvaII GGWCC 3 cut(s) 297, 922, 1522
BamHI GGATCC 2 cut(s) 337, 541
BanII GRGCYC 1 cut(s) 2313
BauI CACGAG 3 cut(s) 210, 588, 1925
BbsI GAAGAC 4 cut(s) 220, 603, 1179, 2222
Bbv12I GWGCWC 1 cut(s) 2313
BbvI GCAGC 5 cut(s) 166, 679, 866, 1973, 2103
BccI CCATC 6 cut(s) 296, 349, 466, 614, 652, 1880
BceAI ACGGC 1 cut(s) 1468
BcgI CGANNNNNNTGC 2 cut(s) 1906, 1940
BciT130I CCWGG 3 cut(s) 710, 966, 1527
BciVI GTATCC 1 cut(s) 10
BclI TGATCA 1 cut(s) 97
BcoDI GTCTC 1 cut(s) 1476
BfaI CTAG 2 cut(s) 464, 990
BfmI CTRYAG 3 cut(s) 106, 180, 756
BfrI CTTAAG 1 cut(s) 2131
BfuI GTATCC 1 cut(s) 10
BglII AGATCT 1 cut(s) 1958
BisI GCNGC 5 cut(s) 180, 693, 880, 1987, 2092
BlsI GCNGC 5 cut(s) 181, 694, 881, 1988, 2093
BmcAI AGTACT 2 cut(s) 891, 1377
Bme1390I CCNGG 3 cut(s) 710, 966, 1527
Bme18I GGWCC 3 cut(s) 297, 922, 1522
BmgT120I GGNCC 4 cut(s) 297, 922, 1168, 1522
BmiI GGNNCC 8 cut(s) 339, 543, 794, 1041, 1248, 1524, 1682, 1774
BmrFI CCNGG 3 cut(s) 710, 966, 1527
BmrI ACTGGG 1 cut(s) 1026
BmsI GCATC 9 cut(s) 367, 657, 1455, 1477, 1546, 1575, 1589, 1758, 2206
BmuI ACTGGG 1 cut(s) 1026
BpiI GAAGAC 4 cut(s) 220, 603, 1179, 2222
BplI GAGNNNNNCTC 2 cut(s) 427, 459
BpuEI CTTGAG 5 cut(s) 79, 235, 1409, 1754, 1841
Bsa29I ATCGAT 1 cut(s) 1583
BsaBI GATNNNNATC 1 cut(s) 2148
BsaJI CCNNGG 4 cut(s) 1525, 1776, 2036, 2114
BsaWI WCCGGW 3 cut(s) 36, 1805, 2233
BsaXI ACNNNNNCTCC 2 cut(s) 459, 489
Bsc4I CCNNNNNNNGG 4 cut(s) 255, 406, 1112, 1180
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 4 cut(s) 320, 925, 1021, 1383
Bse8I GATNNNNATC 1 cut(s) 2148
BseAI TCCGGA 2 cut(s) 1805, 2233
BseBI CCWGG 3 cut(s) 710, 966, 1527
BseCI ATCGAT 1 cut(s) 1583
BseDI CCNNGG 4 cut(s) 1525, 1776, 2036, 2114
BseGI GGATG 7 cut(s) 477, 504, 663, 850, 961, 1102, 1749
BseJI GATNNNNATC 1 cut(s) 2148
BseLI CCNNNNNNNGG 4 cut(s) 255, 406, 1112, 1180
BseMII CTCAG 1 cut(s) 1809
BseNI ACTGG 4 cut(s) 320, 925, 1021, 1383
BseRI GAGGAG 2 cut(s) 180, 425
BseXI GCAGC 5 cut(s) 166, 679, 866, 1973, 2103
BsgI GTGCAG 1 cut(s) 13
Bsh1236I CGCG 1 cut(s) 1506
BshFI GGCC 1 cut(s) 1169
BshTI ACCGGT 1 cut(s) 36
BshVI ATCGAT 1 cut(s) 1583
BsiHKAI GWGCWC 1 cut(s) 2313
BsiSI CCGG 3 cut(s) 37, 1806, 2234
BslI CCNNNNNNNGG 4 cut(s) 255, 406, 1112, 1180
BsmAI GTCTC 1 cut(s) 1476
BsmI GAATGC 1 cut(s) 951
BsnI GGCC 1 cut(s) 1169
Bsp1286I GDGCHC 1 cut(s) 2313
Bsp13I TCCGGA 2 cut(s) 1805, 2233
Bsp1407I TGTACA 1 cut(s) 1207
Bsp19I CCATGG 1 cut(s) 2036
Bsp68I TCGCGA 1 cut(s) 1506
BspACI CCGC 1 cut(s) 400
BspANI GGCC 1 cut(s) 1169
BspCNI CTCAG 1 cut(s) 1808
BspDI ATCGAT 1 cut(s) 1583
BspEI TCCGGA 2 cut(s) 1805, 2233
BspFNI CGCG 1 cut(s) 1506
BspHI TCATGA 2 cut(s) 1303, 1966
BspLI GGNNCC 8 cut(s) 339, 543, 794, 1041, 1248, 1524, 1682, 1774
BspMAI CTGCAG 1 cut(s) 184
BspPI GGATC 6 cut(s) 332, 345, 536, 549, 631, 1059
BspTI CTTAAG 1 cut(s) 2131
BsrFI RCCGGY 1 cut(s) 36
BsrGI TGTACA 1 cut(s) 1207
BsrI ACTGG 4 cut(s) 320, 925, 1021, 1383
BssAI RCCGGY 1 cut(s) 36
BssECI CCNNGG 4 cut(s) 1525, 1776, 2036, 2114
BssSI CACGAG 3 cut(s) 210, 588, 1925
BssT1I CCWWGG 2 cut(s) 1776, 2036
Bst2BI CACGAG 3 cut(s) 210, 588, 1925
Bst2UI CCWGG 3 cut(s) 710, 966, 1527
Bst4CI ACNGT 5 cut(s) 1151, 1164, 1375, 2118, 2283
Bst6I CTCTTC 3 cut(s) 1349, 1486, 1968
BstAFI CTTAAG 1 cut(s) 2131
BstAUI TGTACA 1 cut(s) 1207
BstC8I GCNNGC 3 cut(s) 646, 785, 1086
BstDEI CTNAG 6 cut(s) 478, 1274, 1446, 1795, 2225, 2275
BstDSI CCRYGG 2 cut(s) 2036, 2114
BstENI CCTNNNNNAGG 1 cut(s) 1110
BstF5I GGATG 7 cut(s) 477, 504, 663, 850, 961, 1102, 1749
BstFNI CGCG 1 cut(s) 1506
BstMAI GTCTC 1 cut(s) 1476
BstMWI GCNNNNNNNGC 3 cut(s) 176, 569, 692
BstNI CCWGG 3 cut(s) 710, 966, 1527
BstNSI RCATGY 5 cut(s) 610, 1033, 1088, 1338, 1954
BstSCI CCNGG 3 cut(s) 708, 964, 1525
BstSFI CTRYAG 3 cut(s) 106, 180, 756
BstUI CGCG 1 cut(s) 1506
BstV1I GCAGC 5 cut(s) 166, 679, 866, 1973, 2103
BstV2I GAAGAC 4 cut(s) 220, 603, 1179, 2222
BstX2I RGATCY 3 cut(s) 337, 541, 1958
BstXI CCANNNNNNTGG 1 cut(s) 283
BstYI RGATCY 3 cut(s) 337, 541, 1958
Bsu15I ATCGAT 1 cut(s) 1583
BsuI GTATCC 1 cut(s) 10
BsuRI GGCC 1 cut(s) 1169
BsuTUI ATCGAT 1 cut(s) 1583
BtgI CCRYGG 2 cut(s) 2036, 2114
BtsCI GGATG 7 cut(s) 477, 504, 663, 850, 961, 1102, 1749
BtsIMutI CAGTG 3 cut(s) 1147, 1633, 2288
BtuMI TCGCGA 1 cut(s) 1506
Cac8I GCNNGC 3 cut(s) 646, 785, 1086
CciI TCATGA 2 cut(s) 1303, 1966
Cfr10I RCCGGY 1 cut(s) 36
Cfr13I GGNCC 4 cut(s) 297, 922, 1168, 1522
ClaI ATCGAT 1 cut(s) 1583
Csp6I GTAC 6 cut(s) 490, 852, 890, 1208, 1219, 1376
CspAI ACCGGT 1 cut(s) 36
CviQI GTAC 6 cut(s) 490, 852, 890, 1208, 1219, 1376
DdeI CTNAG 6 cut(s) 478, 1274, 1446, 1795, 2225, 2275
Eam1104I CTCTTC 3 cut(s) 1349, 1486, 1968
EarI CTCTTC 3 cut(s) 1349, 1486, 1968
Ecl136II GAGCTC 1 cut(s) 2311
Eco130I CCWWGG 2 cut(s) 1776, 2036
Eco24I GRGCYC 1 cut(s) 2313
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 3 cut(s) 297, 922, 1522
Eco53kI GAGCTC 1 cut(s) 2311
Eco57I CTGAAG 3 cut(s) 1052, 1075, 1868
EcoICRI GAGCTC 1 cut(s) 2311
EcoNI CCTNNNNNAGG 1 cut(s) 1110
EcoO109I RGGNCCY 1 cut(s) 1522
EcoRI GAATTC 2 cut(s) 129, 1269
EcoRII CCWGG 3 cut(s) 708, 964, 1525
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 2 cut(s) 1776, 2036
EcoT22I ATGCAT 2 cut(s) 382, 1470
EcoT38I GRGCYC 1 cut(s) 2313
ErhI CCWWGG 2 cut(s) 1776, 2036
FalI AAGNNNNNCTT 2 cut(s) 1346, 1378
FauNDI CATATG 1 cut(s) 568
FbaI TGATCA 1 cut(s) 97
FblI GTMKAC 2 cut(s) 426, 1435
Fnu4HI GCNGC 5 cut(s) 180, 693, 880, 1987, 2092
FokI GGATG 7 cut(s) 484, 491, 670, 857, 948, 1089, 1736
FriOI GRGCYC 1 cut(s) 2313
Fsp4HI GCNGC 5 cut(s) 180, 693, 880, 1987, 2092
FspBI CTAG 2 cut(s) 464, 990
GluI GCNGC 5 cut(s) 180, 693, 880, 1987, 2092
HaeIII GGCC 1 cut(s) 1169
HapII CCGG 3 cut(s) 37, 1806, 2234
HincII GTYRAC 2 cut(s) 427, 520
HindII GTYRAC 2 cut(s) 427, 520
HindIII AAGCTT 3 cut(s) 1931, 1994, 2128
HpaII CCGG 3 cut(s) 37, 1806, 2234
HphI GGTGA 2 cut(s) 2012, 2055
Hpy166II GTNNAC 6 cut(s) 427, 520, 913, 1208, 1221, 1436
Hpy188I TCNGA 9 cut(s) 143, 705, 805, 1094, 1481, 1798, 1877, 1887, 2167
Hpy8I GTNNAC 6 cut(s) 427, 520, 913, 1208, 1221, 1436
HpyAV CCTTC 8 cut(s) 64, 716, 806, 842, 1099, 1106, 1334, 1762
HpyCH4III ACNGT 5 cut(s) 1151, 1164, 1375, 2118, 2283
HpyCH4IV ACGT 2 cut(s) 289, 1534
HpyF10VI GCNNNNNNNGC 3 cut(s) 176, 569, 692
HpyF3I CTNAG 6 cut(s) 478, 1274, 1446, 1795, 2225, 2275
HpySE526I ACGT 2 cut(s) 289, 1534
Kpn2I TCCGGA 2 cut(s) 1805, 2233
Ksp22I TGATCA 1 cut(s) 97
LmnI GCTCC 3 cut(s) 167, 568, 2316
Lsp1109I GCAGC 5 cut(s) 166, 679, 866, 1973, 2103
LweI GCATC 9 cut(s) 367, 657, 1455, 1477, 1546, 1575, 1589, 1758, 2206
MaeI CTAG 2 cut(s) 464, 990
MaeII ACGT 2 cut(s) 289, 1534
MaeIII GTNAC 1 cut(s) 207
MfeI CAATTG 1 cut(s) 1404
MflI RGATCY 3 cut(s) 337, 541, 1958
MhlI GDGCHC 1 cut(s) 2313
MlyI GAGTC 3 cut(s) 215, 1803, 2242
MmeI TCCRAC 1 cut(s) 556
Mph1103I ATGCAT 2 cut(s) 382, 1470
MroI TCCGGA 2 cut(s) 1805, 2233
MroXI GAANNNNTTC 1 cut(s) 1065
MseI TTAA 8 cut(s) 447, 554, 614, 1007, 1475, 1829, 1836, 2132
MslI CAYNNNNRTG 2 cut(s) 1034, 1660
MspCI CTTAAG 1 cut(s) 2131
MspI CCGG 3 cut(s) 37, 1806, 2234
MspR9I CCNGG 3 cut(s) 710, 966, 1527
MunI CAATTG 1 cut(s) 1404
Mva1269I GAATGC 1 cut(s) 951
MvaI CCWGG 3 cut(s) 710, 966, 1527
MvnI CGCG 1 cut(s) 1506
MwoI GCNNNNNNNGC 3 cut(s) 176, 569, 692
NcoI CCATGG 1 cut(s) 2036
NdeI CATATG 1 cut(s) 568
NlaIV GGNNCC 8 cut(s) 339, 543, 794, 1041, 1248, 1524, 1682, 1774
NmuCI GTSAC 1 cut(s) 207
NruI TCGCGA 1 cut(s) 1506
NsiI ATGCAT 2 cut(s) 382, 1470
NspI RCATGY 5 cut(s) 610, 1033, 1088, 1338, 1954
PaeI GCATGC 1 cut(s) 1088
PagI TCATGA 2 cut(s) 1303, 1966
PciI ACATGT 2 cut(s) 606, 1029
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PctI GAATGC 1 cut(s) 951
PdmI GAANNNNTTC 1 cut(s) 1065
PfeI GAWTC 7 cut(s) 494, 937, 1061, 1511, 1868, 1903, 2302
PflMI CCANNNNNTGG 1 cut(s) 1180
PfoI TCCNGGA 1 cut(s) 964
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 5 cut(s) 181, 694, 881, 1988, 2093
PleI GAGTC 3 cut(s) 214, 1803, 2242
PpsI GAGTC 3 cut(s) 214, 1803, 2242
PpuMI RGGWCCY 1 cut(s) 1522
PscI ACATGT 2 cut(s) 606, 1029
PshBI ATTAAT 2 cut(s) 1475, 1829
PsiI TTATAA 1 cut(s) 699
Psp124BI GAGCTC 1 cut(s) 2313
Psp5II RGGWCCY 1 cut(s) 1522
Psp6I CCWGG 3 cut(s) 708, 964, 1525
PspGI CCWGG 3 cut(s) 708, 964, 1525
PspN4I GGNNCC 8 cut(s) 339, 543, 794, 1041, 1248, 1524, 1682, 1774
PspPI GGNCC 4 cut(s) 297, 922, 1168, 1522
PspPPI RGGWCCY 1 cut(s) 1522
PsrI GAACNNNNNNTAC 2 cut(s) 882, 914
PstI CTGCAG 1 cut(s) 184
PsuI RGATCY 3 cut(s) 337, 541, 1958
RruI TCGCGA 1 cut(s) 1506
RsaI GTAC 6 cut(s) 491, 853, 891, 1209, 1220, 1377
RsaNI GTAC 6 cut(s) 490, 852, 890, 1208, 1219, 1376
RseI CAYNNNNRTG 2 cut(s) 1034, 1660
SacI GAGCTC 1 cut(s) 2313
SalI GTCGAC 1 cut(s) 425
SaqAI TTAA 8 cut(s) 447, 554, 614, 1007, 1475, 1829, 1836, 2132
SatI GCNGC 5 cut(s) 180, 693, 880, 1987, 2092
Sau96I GGNCC 4 cut(s) 297, 922, 1168, 1522
ScaI AGTACT 2 cut(s) 891, 1377
SchI GAGTC 3 cut(s) 215, 1803, 2242
ScrFI CCNGG 3 cut(s) 710, 966, 1527
SduI GDGCHC 1 cut(s) 2313
SfaNI GCATC 9 cut(s) 367, 657, 1455, 1477, 1546, 1575, 1589, 1758, 2206
SfcI CTRYAG 3 cut(s) 106, 180, 756
SinI GGWCC 3 cut(s) 297, 922, 1522
SmiMI CAYNNNNRTG 2 cut(s) 1034, 1660
SmlI CTYRAG 6 cut(s) 58, 250, 1388, 1733, 1820, 2131
SmoI CTYRAG 6 cut(s) 58, 250, 1388, 1733, 1820, 2131
SphI GCATGC 1 cut(s) 1088
SsiI CCGC 1 cut(s) 400
SspI AATATT 2 cut(s) 514, 1852
SspMI CTAG 2 cut(s) 464, 990
SstI GAGCTC 1 cut(s) 2313
StyD4I CCNGG 3 cut(s) 708, 964, 1525
StyI CCWWGG 2 cut(s) 1776, 2036
TaaI ACNGT 5 cut(s) 1151, 1164, 1375, 2118, 2283
TaiI ACGT 2 cut(s) 292, 1537
TaqI TCGA 4 cut(s) 426, 1110, 1583, 1857
TaqII GACCGA 2 cut(s) 314, 2006
TatI WGTACW 3 cut(s) 889, 1207, 1375
TfiI GAWTC 7 cut(s) 494, 937, 1061, 1511, 1868, 1903, 2302
Tru1I TTAA 8 cut(s) 447, 554, 614, 1007, 1475, 1829, 1836, 2132
Tru9I TTAA 8 cut(s) 447, 554, 614, 1007, 1475, 1829, 1836, 2132
TscAI CASTG 3 cut(s) 1154, 1633, 2288
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 5 cut(s) 179, 692, 879, 1986, 2091
Tsp45I GTSAC 1 cut(s) 207
TspGWI ACGGA 1 cut(s) 1653
TspRI CASTG 3 cut(s) 1154, 1633, 2288
Van91I CCANNNNNTGG 1 cut(s) 1180
Vha464I CTTAAG 1 cut(s) 2131
VpaK11BI GGWCC 3 cut(s) 297, 922, 1522
VspI ATTAAT 2 cut(s) 1475, 1829
XagI CCTNNNNNAGG 1 cut(s) 1110
XapI RAATTY 4 cut(s) 129, 868, 1260, 1269
XceI RCATGY 5 cut(s) 610, 1033, 1088, 1338, 1954
XmiI GTMKAC 2 cut(s) 426, 1435
XmnI GAANNNNTTC 1 cut(s) 1065
XspI CTAG 2 cut(s) 464, 990
ZrmI AGTACT 2 cut(s) 891, 1377
Zsp2I ATGCAT 2 cut(s) 382, 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.