RLG00000035113

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
61095406 .. 61096184
779 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035113

Sequence Viewer

Length: 426 bp
ATGGTGCAGGAAGATGGGTTAGGGTGGTTGATGACCAAGCAAGGTCTGCAAGTTGAAGGCAATAAGGGGTCAGGCTCGTACCTTGTCATGGCCGTTTGGAAGCAATGCGAAGTGGGTGGTAAGCAAAAGCGGTGGGGTGGTGGAATGAGGGTAGAGCTGAGCGATCTACACTCATATCGTAGCATCTCCTATCCTCGTGCATCAACGATGAAGAAAGCGGCATTAGAGAGGATGGTTTGGGCGGCTCGAATGACATGGATGGTGAGATCTGACCCTATCTCTGATCATGGTAAGGTAGACCAGTGGAAGGCTTTGGGCGGATGGAGGTGGTTAACGTCCATTTCTGGGTGGTTCAGAGTTGTCGGGGATGGGCTGCCATGGGTAGGGAGTGGAGGAGGTGCTGGTGGAGGGATGAAGGCGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

142

Amino Acids

15.55

Weight (kDa)

10.06

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 297
AciI CCGC 4 cut(s) 130, 218, 242, 318
AcoI YGGCCR 1 cut(s) 90
AfaI GTAC 1 cut(s) 80
AfiI CCNNNNNNNGG 4 cut(s) 88, 307, 345, 383
AgsI TTSAA 1 cut(s) 56
AluBI AGCT 1 cut(s) 157
AluI AGCT 1 cut(s) 157
AoxI GGCC 1 cut(s) 90
ApeKI GCWGC 1 cut(s) 373
AsuHPI GGTGA 1 cut(s) 274
BauI CACGAG 1 cut(s) 195
BbvI GCAGC 1 cut(s) 360
BccI CCATC 5 cut(s) 8, 226, 253, 315, 362
BceAI ACGGC 1 cut(s) 77
BclI TGATCA 1 cut(s) 283
BglII AGATCT 1 cut(s) 266
BisI GCNGC 3 cut(s) 219, 243, 374
BlpI GCTNAGC 1 cut(s) 158
BlsI GCNGC 3 cut(s) 220, 244, 375
BmsI GCATC 2 cut(s) 192, 209
Bpu1102I GCTNAGC 1 cut(s) 158
BsaJI CCNNGG 1 cut(s) 377
Bsc4I CCNNNNNNNGG 4 cut(s) 88, 307, 345, 383
Bse1I ACTGG 1 cut(s) 301
Bse3DI GCAATG 1 cut(s) 110
BseDI CCNNGG 1 cut(s) 377
BseGI GGATG 5 cut(s) 237, 264, 326, 373, 417
BseLI CCNNNNNNNGG 4 cut(s) 88, 307, 345, 383
BseMI GCAATG 1 cut(s) 110
BseMII CTCAG 1 cut(s) 149
BseNI ACTGG 1 cut(s) 301
BseRI GAGGAG 1 cut(s) 408
BseXI GCAGC 1 cut(s) 360
BsgI GTGCAG 1 cut(s) 26
BshFI GGCC 1 cut(s) 92
BslI CCNNNNNNNGG 4 cut(s) 88, 307, 345, 383
BsnI GGCC 1 cut(s) 92
Bsp143I GATC 3 cut(s) 163, 266, 283
Bsp1720I GCTNAGC 1 cut(s) 158
Bsp19I CCATGG 1 cut(s) 377
BspACI CCGC 4 cut(s) 130, 218, 242, 318
BspANI GGCC 1 cut(s) 92
BspCNI CTCAG 1 cut(s) 150
BsrDI GCAATG 1 cut(s) 110
BsrI ACTGG 1 cut(s) 301
BssECI CCNNGG 1 cut(s) 377
BssMI GATC 3 cut(s) 163, 266, 283
BssSI CACGAG 1 cut(s) 195
BssT1I CCWWGG 1 cut(s) 377
Bst2BI CACGAG 1 cut(s) 195
BstAPI GCANNNNNTGC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 158
BstDSI CCRYGG 1 cut(s) 377
BstF5I GGATG 5 cut(s) 237, 264, 326, 373, 417
BstKTI GATC 3 cut(s) 166, 269, 286
BstMBI GATC 3 cut(s) 163, 266, 283
BstMWI GCNNNNNNNGC 1 cut(s) 46
BstV1I GCAGC 1 cut(s) 360
BstX2I RGATCY 1 cut(s) 266
BstYI RGATCY 1 cut(s) 266
BsuRI GGCC 1 cut(s) 92
BtgI CCRYGG 1 cut(s) 377
BtsCI GGATG 5 cut(s) 237, 264, 326, 373, 417
BtsIMutI CAGTG 1 cut(s) 308
Csp6I GTAC 1 cut(s) 79
CspCI CAANNNNNGTGG 2 cut(s) 113, 148
CviAII CATG 4 cut(s) 88, 255, 287, 378
CviJI RGCY 6 cut(s) 75, 92, 157, 245, 311, 373
CviKI_1 RGCY 6 cut(s) 75, 92, 157, 245, 311, 373
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 1 cut(s) 158
DpnI GATC 3 cut(s) 165, 268, 285
DpnII GATC 3 cut(s) 163, 266, 283
EaeI YGGCCR 1 cut(s) 90
EciI GGCGGA 1 cut(s) 333
Eco130I CCWWGG 1 cut(s) 377
EcoT14I CCWWGG 1 cut(s) 377
ErhI CCWWGG 1 cut(s) 377
FaeI CATG 4 cut(s) 91, 258, 290, 381
FaiI YATR 5 cut(s) 89, 175, 256, 288, 379
FatI CATG 4 cut(s) 87, 254, 286, 377
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 297
Fnu4HI GCNGC 3 cut(s) 219, 243, 374
FokI GGATG 4 cut(s) 244, 271, 333, 380
Fsp4HI GCNGC 3 cut(s) 219, 243, 374
GluI GCNGC 3 cut(s) 219, 243, 374
HaeIII GGCC 1 cut(s) 92
Hin1II CATG 4 cut(s) 91, 258, 290, 381
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HpaI GTTAAC 1 cut(s) 333
HphI GGTGA 1 cut(s) 274
Hpy166II GTNNAC 2 cut(s) 298, 333
Hpy188I TCNGA 3 cut(s) 271, 283, 356
Hpy8I GTNNAC 2 cut(s) 298, 333
HpyAV CCTTC 3 cut(s) 50, 301, 409
HpyCH4IV ACGT 1 cut(s) 335
HpyCH4V TGCA 3 cut(s) 7, 49, 200
HpyF10VI GCNNNNNNNGC 1 cut(s) 46
HpyF3I CTNAG 1 cut(s) 158
HpySE526I ACGT 1 cut(s) 335
Hsp92II CATG 4 cut(s) 91, 258, 290, 381
Ksp22I TGATCA 1 cut(s) 283
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 3 cut(s) 163, 266, 283
LpnPI CCDG 4 cut(s) 57, 314, 330, 387
Lsp1109I GCAGC 1 cut(s) 360
LweI GCATC 2 cut(s) 192, 209
MaeII ACGT 1 cut(s) 335
MalI GATC 3 cut(s) 165, 268, 285
MboI GATC 3 cut(s) 163, 266, 283
MboII GAAGA 2 cut(s) 23, 223
MflI RGATCY 1 cut(s) 266
MnlI CCTC 8 cut(s) 141, 204, 222, 318, 386, 389, 401, 414
MseI TTAA 1 cut(s) 332
MwoI GCNNNNNNNGC 1 cut(s) 46
NcoI CCATGG 1 cut(s) 377
NdeII GATC 3 cut(s) 163, 266, 283
NlaIII CATG 4 cut(s) 91, 258, 290, 381
PkrI GCNGC 3 cut(s) 220, 244, 375
PsuI RGATCY 1 cut(s) 266
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
SaqAI TTAA 1 cut(s) 332
SatI GCNGC 3 cut(s) 219, 243, 374
Sau3AI GATC 3 cut(s) 163, 266, 283
SetI ASST 8 cut(s) 46, 84, 159, 297, 329, 338, 400, 425
SfaNI GCATC 2 cut(s) 192, 209
SsiI CCGC 4 cut(s) 130, 218, 242, 318
StyI CCWWGG 1 cut(s) 377
TaiI ACGT 1 cut(s) 338
TaqI TCGA 1 cut(s) 247
TauI GCSGC 2 cut(s) 221, 245
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 1 cut(s) 308
TseI GCWGC 1 cut(s) 373
TspDTI ATGAA 1 cut(s) 224
TspRI CASTG 1 cut(s) 308
XmiI GTMKAC 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.