Rmu_sc0000063.1_g000028

Leucine rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000063.1
OG0000127
Physical Location & Seq
Reverse (-)
153653 .. 157426
3774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000063.1_g000028.1.cds

Sequence Viewer

Length: 1476 bp
atgcctgcaaggaaggacgtccctacgagaggacgtagcgccaccctacacgaaggtaggcatggcaccaatgccaaagagagtgacactctggccttacaggccatggccccaagtaggatgcgtgggaggcccgtgggttcgaaggatactttggcacattccaatcctttaatcatcatgactcaaaatccgtctcatgagtatcttccgggttatgctagatatagctctacgccaacgcgacgccattggattggtgtaaaagatatctttctatacttgagaagtacgattgatatgggcttgttctatccctacgaagagatgatggattcggacccatcacacaccagaaacgccgccaacactggcctgcgttctctatccgaaggttttgctgatattggtcatcagggggaggcacagccatcagggggcgatgtatacatgttcacctcgaaacgtgaagggtgtgttgtgctctttttccccttcgaccgagcacataaattgtggcatgccgggatgaagagaaaaaagaagccaaaaaaacataattttcagagttttgctagttacgatgttgtggagggctttgcacaatttaaagacattcctagtcatacatctagaggaacatcaaatgaaggaaatcaacatacgcctacacaaccaatttctggaaattctcccatcaacttggacatggatgtagatgaggtaattgcaggtgaaactgcaaatcccaatgtgaggcctcaaggaaggaaggctgccaaagaagcaatacggaaaggaaagaaggcagcaaaagatcaaagtactttgtcaagcactctcaagagtatagcgaacaaccaaatagaggcaaccgcgggcaagaaaaaactcgatgacgaatttgctcgaagtctccaagaggaagagaaaatagcatatatcctcttacaaatcgaaatgcgaaaagagcaacttctatttcaagaaaggcaagatcgaattaaagagagggaagagcgtattatggagattgatacaagtaaaatgacgccgttattgaagatagcggagaaagaagatcttgacgagcagccgccaccttctatgggtggatactatccgcaaccaaattttggtggtgcatacccgcaaccaccttaccccggtgtatacccacaaccaccttgcaccgatggattcccacaacctcccttaaccggtggattcccaccacctcccttcaccggtggattcccacaaccctctgcttctatgggtggattcccacaaccctctgcttctatgggtggatactatccgcaaccactttatcttgagggatatcctacacaaccacaattttcacctttctctacggatgattccaccaaccctaaccctaatgatgacccttcaaacgcaaattggattcctagagaagatgaggattatgattatgatttgaataattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

491

Amino Acids

54.75

Weight (kDa)

6.1

Isoelectric Point (pI)

55.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000127)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 722
AatII GACGTC 1 cut(s) 21
Acc36I ACCTGC 1 cut(s) 722
AccB1I GGYRCC 1 cut(s) 65
AccB7I CCANNNNNTGG 2 cut(s) 683, 1136
AccI GTMKAC 2 cut(s) 447, 1173
AccII CGCG 2 cut(s) 244, 878
AciI CCGC 8 cut(s) 363, 876, 878, 1070, 1097, 1124, 1151, 1322
AcsI RAATTY 3 cut(s) 688, 902, 1132
AcyI GRCGYC 3 cut(s) 18, 247, 1052
AfaI GTAC 2 cut(s) 292, 826
AflIII ACRYGT 1 cut(s) 450
AgeI ACCGGT 2 cut(s) 1220, 1247
AgsI TTSAA 4 cut(s) 986, 1063, 1419, 1468
AjuI GAANNNNNNNTTGG 2 cut(s) 137, 169
AluBI AGCT 1 cut(s) 231
AluI AGCT 1 cut(s) 231
Alw21I GWGCWC 2 cut(s) 486, 508
Alw26I GTCTC 2 cut(s) 201, 920
AoxI GGCC 6 cut(s) 93, 102, 108, 131, 373, 758
ApeKI GCWGC 3 cut(s) 776, 809, 1093
ApoI RAATTY 3 cut(s) 688, 902, 1132
AsiGI ACCGGT 2 cut(s) 1220, 1247
AspLEI GCGC 1 cut(s) 41
AspS9I GGNCC 3 cut(s) 109, 132, 340
AsuC2I CCSGG 3 cut(s) 213, 526, 1167
AsuHPI GGTGA 4 cut(s) 448, 746, 1237, 1359
AsuII TTCGAA 1 cut(s) 143
AvaII GGWCC 1 cut(s) 340
BanI GGYRCC 1 cut(s) 65
Bbv12I GWGCWC 2 cut(s) 486, 508
BbvI GCAGC 3 cut(s) 763, 821, 1105
BccI CCATC 5 cut(s) 325, 352, 439, 704, 1190
BceAI ACGGC 1 cut(s) 1039
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciVI GTATCC 3 cut(s) 142, 1109, 1307
BcnI CCSGG 3 cut(s) 213, 526, 1167
BcoDI GTCTC 2 cut(s) 201, 920
BfaI CTAG 5 cut(s) 222, 576, 621, 633, 1437
BfoI RGCGCY 1 cut(s) 42
BfuAI ACCTGC 1 cut(s) 722
BfuI GTATCC 3 cut(s) 142, 1109, 1307
BglI GCCNNNNNGGC 1 cut(s) 101
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 5 cut(s) 363, 777, 810, 1094, 1097
BlsI GCNGC 5 cut(s) 364, 778, 811, 1095, 1098
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 3 cut(s) 213, 526, 1167
Bme18I GGWCC 1 cut(s) 340
BmgT120I GGNCC 3 cut(s) 109, 132, 340
BmiI GGNNCC 3 cut(s) 67, 111, 342
BmrFI CCNGG 3 cut(s) 213, 526, 1167
BmsI GCATC 1 cut(s) 111
BplI GAGNNNNNCTC 2 cut(s) 73, 105
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 4 cut(s) 304, 747, 827, 1358
BpuMI CCSGG 3 cut(s) 213, 526, 1167
BsaHI GRCGYC 3 cut(s) 18, 247, 1052
BsaJI CCNNGG 4 cut(s) 105, 135, 876, 1165
BsaWI WCCGGW 2 cut(s) 1220, 1247
Bse118I RCCGGY 2 cut(s) 1220, 1247
Bse1I ACTGG 1 cut(s) 376
BseDI CCNNGG 4 cut(s) 105, 135, 876, 1165
BseGI GGATG 4 cut(s) 126, 534, 718, 1387
BseNI ACTGG 1 cut(s) 376
BseXI GCAGC 3 cut(s) 763, 821, 1105
Bsh1236I CGCG 2 cut(s) 244, 878
Bsh1285I CGRYCG 1 cut(s) 502
BshFI GGCC 6 cut(s) 95, 104, 110, 133, 375, 760
BshNI GGYRCC 1 cut(s) 65
BshTI ACCGGT 2 cut(s) 1220, 1247
BsiEI CGRYCG 1 cut(s) 502
BsiHKAI GWGCWC 2 cut(s) 486, 508
BsiSI CCGG 5 cut(s) 212, 525, 1167, 1221, 1248
BslFI GGGAC 1 cut(s) 5
BsmAI GTCTC 2 cut(s) 201, 920
BsmBI CGTCTC 1 cut(s) 201
BsmFI GGGAC 1 cut(s) 5
BsnI GGCC 6 cut(s) 95, 104, 110, 133, 375, 760
Bsp119I TTCGAA 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 486, 508
Bsp143I GATC 3 cut(s) 817, 997, 1081
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 8 cut(s) 363, 876, 878, 1070, 1097, 1124, 1151, 1322
BspANI GGCC 6 cut(s) 95, 104, 110, 133, 375, 760
BspFNI CGCG 2 cut(s) 244, 878
BspHI TCATGA 2 cut(s) 180, 199
BspLI GGNNCC 3 cut(s) 67, 111, 342
BspMI ACCTGC 1 cut(s) 722
BspQI GCTCTTC 1 cut(s) 1011
BspT104I TTCGAA 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 65
BsrFI RCCGGY 2 cut(s) 1220, 1247
BsrI ACTGG 1 cut(s) 376
BssAI RCCGGY 2 cut(s) 1220, 1247
BssECI CCNNGG 4 cut(s) 105, 135, 876, 1165
BssMI GATC 3 cut(s) 817, 997, 1081
BssNAI GTATAC 2 cut(s) 448, 1174
BssNI GRCGYC 3 cut(s) 18, 247, 1052
BssT1I CCWWGG 1 cut(s) 105
Bst1107I GTATAC 2 cut(s) 448, 1174
Bst6I CTCTTC 4 cut(s) 318, 527, 921, 1011
BstACI GRCGYC 3 cut(s) 18, 247, 1052
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 4 cut(s) 6, 377, 522, 880
BstDSI CCRYGG 3 cut(s) 105, 135, 876
BstENI CCTNNNNNAGG 1 cut(s) 27
BstF5I GGATG 4 cut(s) 126, 534, 718, 1387
BstFNI CGCG 2 cut(s) 244, 878
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 1 cut(s) 41
BstKTI GATC 3 cut(s) 820, 1000, 1084
BstMAI GTCTC 2 cut(s) 201, 920
BstMBI GATC 3 cut(s) 817, 997, 1081
BstMCI CGRYCG 1 cut(s) 502
BstMWI GCNNNNNNNGC 4 cut(s) 101, 130, 785, 970
BstNSI RCATGY 2 cut(s) 454, 524
BstSCI CCNGG 3 cut(s) 211, 524, 1165
BstUI CGCG 2 cut(s) 244, 878
BstV1I GCAGC 3 cut(s) 763, 821, 1105
BstX2I RGATCY 1 cut(s) 1081
BstXI CCANNNNNNTGG 2 cut(s) 257, 703
BstYI RGATCY 1 cut(s) 1081
BstZ17I GTATAC 2 cut(s) 448, 1174
BsuI GTATCC 3 cut(s) 142, 1109, 1307
BsuRI GGCC 6 cut(s) 95, 104, 110, 133, 375, 760
BtgI CCRYGG 3 cut(s) 105, 135, 876
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 4 cut(s) 126, 534, 718, 1387
BtsIMutI CAGTG 1 cut(s) 369
BveI ACCTGC 1 cut(s) 722
Cac8I GCNNGC 4 cut(s) 6, 377, 522, 880
CciI TCATGA 2 cut(s) 180, 199
CfoI GCGC 1 cut(s) 41
Cfr10I RCCGGY 2 cut(s) 1220, 1247
Cfr13I GGNCC 3 cut(s) 109, 132, 340
Cfr42I CCGCGG 1 cut(s) 879
CseI GACGC 2 cut(s) 255, 1060
Csp6I GTAC 2 cut(s) 291, 825
CspAI ACCGGT 2 cut(s) 1220, 1247
CviAII CATG 7 cut(s) 62, 106, 181, 200, 451, 521, 709
CviQI GTAC 2 cut(s) 291, 825
DpnI GATC 3 cut(s) 819, 999, 1083
DpnII GATC 3 cut(s) 817, 997, 1081
DraI TTTAAA 1 cut(s) 610
Eam1104I CTCTTC 4 cut(s) 318, 527, 921, 1011
EarI CTCTTC 4 cut(s) 318, 527, 921, 1011
Eco130I CCWWGG 1 cut(s) 105
Eco147I AGGCCT 1 cut(s) 760
Eco32I GATATC 2 cut(s) 271, 1346
Eco47I GGWCC 1 cut(s) 340
EcoNI CCTNNNNNAGG 1 cut(s) 27
EcoRV GATATC 2 cut(s) 271, 1346
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
Esp3I CGTCTC 1 cut(s) 201
FaeI CATG 7 cut(s) 65, 109, 184, 203, 454, 524, 712
FalI AAGNNNNNCTT 4 cut(s) 960, 992, 1068, 1100
FaqI GGGAC 1 cut(s) 5
FatI CATG 7 cut(s) 61, 105, 180, 199, 450, 520, 708
FauI CCCGC 2 cut(s) 871, 1158
FblI GTMKAC 2 cut(s) 447, 1173
Fnu4HI GCNGC 5 cut(s) 363, 777, 810, 1094, 1097
FokI GGATG 4 cut(s) 133, 541, 725, 1394
Fsp4HI GCNGC 5 cut(s) 363, 777, 810, 1094, 1097
FspBI CTAG 5 cut(s) 222, 576, 621, 633, 1437
GlaI GCGC 1 cut(s) 40
GluI GCNGC 5 cut(s) 363, 777, 810, 1094, 1097
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 6 cut(s) 95, 104, 110, 133, 375, 760
HapII CCGG 5 cut(s) 212, 525, 1167, 1221, 1248
HgaI GACGC 2 cut(s) 255, 1060
HhaI GCGC 1 cut(s) 41
Hin1I GRCGYC 3 cut(s) 18, 247, 1052
Hin1II CATG 7 cut(s) 65, 109, 184, 203, 454, 524, 712
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HinfI GANTC 8 cut(s) 184, 335, 1200, 1227, 1254, 1284, 1385, 1432
HpaII CCGG 5 cut(s) 212, 525, 1167, 1221, 1248
HphI GGTGA 4 cut(s) 448, 746, 1237, 1359
Hpy166II GTNNAC 3 cut(s) 448, 456, 1174
Hpy188I TCNGA 3 cut(s) 340, 391, 567
Hpy188III TCNNGA 8 cut(s) 181, 200, 633, 684, 844, 986, 1085, 1337
Hpy8I GTNNAC 3 cut(s) 448, 456, 1174
Hpy99I CGWCG 1 cut(s) 249
HpyCH4IV ACGT 3 cut(s) 18, 34, 466
HpyCH4V TGCA 6 cut(s) 8, 602, 731, 743, 1145, 1191
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 130, 785, 970
HpySE526I ACGT 3 cut(s) 18, 34, 466
Hsp92I GRCGYC 3 cut(s) 18, 247, 1052
Hsp92II CATG 7 cut(s) 65, 109, 184, 203, 454, 524, 712
HspAI GCGC 1 cut(s) 39
KspI CCGCGG 1 cut(s) 879
Kzo9I GATC 3 cut(s) 817, 997, 1081
LguI GCTCTTC 1 cut(s) 1011
Lsp1109I GCAGC 3 cut(s) 763, 821, 1105
LweI GCATC 1 cut(s) 111
MaeI CTAG 5 cut(s) 222, 576, 621, 633, 1437
MaeII ACGT 3 cut(s) 18, 34, 466
MaeIII GTNAC 2 cut(s) 83, 578
MalI GATC 3 cut(s) 819, 999, 1083
MboI GATC 3 cut(s) 817, 997, 1081
MboII GAAGA 8 cut(s) 200, 335, 544, 938, 1028, 1075, 1091, 1454
MflI RGATCY 1 cut(s) 1081
MhlI GDGCHC 2 cut(s) 486, 508
MlyI GAGTC 1 cut(s) 178
MseI TTAA 4 cut(s) 173, 609, 1005, 1217
MspA1I CMGCKG 1 cut(s) 878
MspI CCGG 5 cut(s) 212, 525, 1167, 1221, 1248
MspR9I CCNGG 3 cut(s) 213, 526, 1167
MvnI CGCG 2 cut(s) 244, 878
MwoI GCNNNNNNNGC 4 cut(s) 101, 130, 785, 970
NciI CCSGG 3 cut(s) 213, 526, 1167
NcoI CCATGG 1 cut(s) 105
NdeII GATC 3 cut(s) 817, 997, 1081
NlaIII CATG 7 cut(s) 65, 109, 184, 203, 454, 524, 712
NlaIV GGNNCC 3 cut(s) 67, 111, 342
NmuCI GTSAC 1 cut(s) 83
NspI RCATGY 2 cut(s) 454, 524
NspV TTCGAA 1 cut(s) 143
PaeI GCATGC 1 cut(s) 524
PagI TCATGA 2 cut(s) 180, 199
PaqCI CACCTGC 1 cut(s) 722
PceI AGGCCT 1 cut(s) 760
PciI ACATGT 1 cut(s) 450
PciSI GCTCTTC 1 cut(s) 1011
PfeI GAWTC 7 cut(s) 335, 1200, 1227, 1254, 1284, 1385, 1432
PflMI CCANNNNNTGG 2 cut(s) 683, 1136
PinAI ACCGGT 2 cut(s) 1220, 1247
PkrI GCNGC 5 cut(s) 364, 778, 811, 1095, 1098
PleI GAGTC 1 cut(s) 178
PpsI GAGTC 1 cut(s) 178
PscI ACATGT 1 cut(s) 450
PspN4I GGNNCC 3 cut(s) 67, 111, 342
PspPI GGNCC 3 cut(s) 109, 132, 340
PsuI RGATCY 1 cut(s) 1081
RsaI GTAC 2 cut(s) 292, 826
RsaNI GTAC 2 cut(s) 291, 825
SacII CCGCGG 1 cut(s) 879
SapI GCTCTTC 1 cut(s) 1011
SaqAI TTAA 4 cut(s) 173, 609, 1005, 1217
SatI GCNGC 5 cut(s) 363, 777, 810, 1094, 1097
Sau3AI GATC 3 cut(s) 817, 997, 1081
Sau96I GGNCC 3 cut(s) 109, 132, 340
ScaI AGTACT 1 cut(s) 826
SchI GAGTC 1 cut(s) 178
ScrFI CCNGG 3 cut(s) 213, 526, 1167
SduI GDGCHC 2 cut(s) 486, 508
SfaNI GCATC 1 cut(s) 111
SfiI GGCCNNNNNGGCC 1 cut(s) 101
Sfr303I CCGCGG 1 cut(s) 879
SfuI TTCGAA 1 cut(s) 143
SgrAI CRCCGGYG 1 cut(s) 1247
SgrBI CCGCGG 1 cut(s) 879
SinI GGWCC 1 cut(s) 340
SmlI CTYRAG 4 cut(s) 283, 762, 842, 1337
SmoI CTYRAG 4 cut(s) 283, 762, 842, 1337
SphI GCATGC 1 cut(s) 524
SseBI AGGCCT 1 cut(s) 760
SsiI CCGC 8 cut(s) 363, 876, 878, 1070, 1097, 1124, 1151, 1322
SspMI CTAG 5 cut(s) 222, 576, 621, 633, 1437
StuI AGGCCT 1 cut(s) 760
StyD4I CCNGG 3 cut(s) 211, 524, 1165
StyI CCWWGG 1 cut(s) 105
TaiI ACGT 3 cut(s) 21, 37, 469
TaqI TCGA 7 cut(s) 143, 461, 498, 894, 910, 957, 1000
TaqII GACCGA 1 cut(s) 516
TatI WGTACW 1 cut(s) 824
TauI GCSGC 2 cut(s) 365, 1099
TfiI GAWTC 7 cut(s) 335, 1200, 1227, 1254, 1284, 1385, 1432
Tru1I TTAA 4 cut(s) 173, 609, 1005, 1217
Tru9I TTAA 4 cut(s) 173, 609, 1005, 1217
TscAI CASTG 1 cut(s) 376
TseFI GTSAC 1 cut(s) 83
TseI GCWGC 3 cut(s) 776, 809, 1093
Tsp45I GTSAC 1 cut(s) 83
TspDTI ATGAA 2 cut(s) 545, 663
TspGWI ACGGA 3 cut(s) 183, 808, 1394
TspRI CASTG 1 cut(s) 376
Van91I CCANNNNNTGG 2 cut(s) 683, 1136
VpaK11BI GGWCC 1 cut(s) 340
XagI CCTNNNNNAGG 1 cut(s) 27
XapI RAATTY 3 cut(s) 688, 902, 1132
XbaI TCTAGA 1 cut(s) 632
XceI RCATGY 2 cut(s) 454, 524
XmiI GTMKAC 2 cut(s) 447, 1173
XspI CTAG 5 cut(s) 222, 576, 621, 633, 1437
ZraI GACGTC 1 cut(s) 19
ZrmI AGTACT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.