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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 197 |
| Acc36I | ACCTGC | 1 cut(s) | 197 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 686 |
| AccIII | TCCGGA | 1 cut(s) | 107 |
| AciI | CCGC | 3 cut(s) | 236, 593, 782 |
| AcoI | YGGCCR | 1 cut(s) | 874 |
| AcsI | RAATTY | 3 cut(s) | 163, 377, 682 |
| AcyI | GRCGYC | 1 cut(s) | 548 |
| AfaI | GTAC | 1 cut(s) | 909 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 343, 632, 659, 686, 770 |
| AgeI | ACCGGT | 1 cut(s) | 770 |
| AgsI | TTSAA | 2 cut(s) | 461, 611 |
| AjnI | CCWGG | 1 cut(s) | 827 |
| AluBI | AGCT | 3 cut(s) | 45, 619, 849 |
| AluI | AGCT | 3 cut(s) | 45, 619, 849 |
| Alw26I | GTCTC | 2 cut(s) | 320, 395 |
| Ama87I | CYCGRG | 1 cut(s) | 317 |
| Aor13HI | TCCGGA | 1 cut(s) | 107 |
| AoxI | GGCC | 2 cut(s) | 233, 874 |
| ApeKI | GCWGC | 4 cut(s) | 251, 284, 616, 619 |
| ApoI | RAATTY | 3 cut(s) | 163, 377, 682 |
| AsiGI | ACCGGT | 1 cut(s) | 770 |
| AsuC2I | CCSGG | 2 cut(s) | 717, 890 |
| AsuHPI | GGTGA | 3 cut(s) | 221, 787, 866 |
| AvaI | CYCGRG | 1 cut(s) | 317 |
| BanII | GRGCYC | 1 cut(s) | 890 |
| BbsI | GAAGAC | 1 cut(s) | 855 |
| BbvI | GCAGC | 4 cut(s) | 238, 296, 606, 628 |
| BccI | CCATC | 2 cut(s) | 179, 975 |
| BciT130I | CCWGG | 1 cut(s) | 829 |
| BciVI | GTATCC | 2 cut(s) | 428, 632 |
| BcnI | CCSGG | 2 cut(s) | 717, 890 |
| BcoDI | GTCTC | 2 cut(s) | 320, 395 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BfuAI | ACCTGC | 1 cut(s) | 197 |
| BfuI | GTATCC | 2 cut(s) | 428, 632 |
| BglII | AGATCT | 1 cut(s) | 604 |
| BisI | GCNGC | 5 cut(s) | 236, 252, 285, 617, 620 |
| BlsI | GCNGC | 5 cut(s) | 237, 253, 286, 618, 621 |
| Bme1390I | CCNGG | 3 cut(s) | 717, 829, 890 |
| BmeT110I | CYCGRG | 1 cut(s) | 317 |
| BmiI | GGNNCC | 1 cut(s) | 887 |
| BmrFI | CCNGG | 3 cut(s) | 717, 829, 890 |
| BmsI | GCATC | 2 cut(s) | 736, 802 |
| BpiI | GAAGAC | 1 cut(s) | 855 |
| BpuMI | CCSGG | 2 cut(s) | 717, 890 |
| BsaHI | GRCGYC | 1 cut(s) | 548 |
| BsaJI | CCNNGG | 3 cut(s) | 351, 715, 827 |
| BsaWI | WCCGGW | 2 cut(s) | 107, 770 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 343, 632, 659, 686, 770 |
| Bse118I | RCCGGY | 1 cut(s) | 770 |
| BseAI | TCCGGA | 1 cut(s) | 107 |
| BseBI | CCWGG | 1 cut(s) | 829 |
| BseDI | CCNNGG | 3 cut(s) | 351, 715, 827 |
| BseGI | GGATG | 5 cut(s) | 90, 104, 193, 823, 967 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 343, 632, 659, 686, 770 |
| BseMII | CTCAG | 2 cut(s) | 859, 994 |
| BseX3I | CGGCCG | 1 cut(s) | 874 |
| BseXI | GCAGC | 4 cut(s) | 238, 296, 606, 628 |
| Bsh1285I | CGRYCG | 1 cut(s) | 877 |
| BshFI | GGCC | 2 cut(s) | 235, 876 |
| BshTI | ACCGGT | 1 cut(s) | 770 |
| BsiEI | CGRYCG | 1 cut(s) | 877 |
| BsiHKCI | CYCGRG | 1 cut(s) | 317 |
| BsiSI | CCGG | 5 cut(s) | 108, 717, 771, 877, 890 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 343, 632, 659, 686, 770 |
| BsmAI | GTCTC | 2 cut(s) | 320, 395 |
| BsmI | GAATGC | 3 cut(s) | 668, 749, 1015 |
| BsnI | GGCC | 2 cut(s) | 235, 876 |
| BsoBI | CYCGRG | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 1 cut(s) | 890 |
| Bsp13I | TCCGGA | 1 cut(s) | 107 |
| Bsp143I | GATC | 4 cut(s) | 292, 472, 604, 990 |
| BspACI | CCGC | 3 cut(s) | 236, 593, 782 |
| BspANI | GGCC | 2 cut(s) | 235, 876 |
| BspCNI | CTCAG | 2 cut(s) | 858, 993 |
| BspEI | TCCGGA | 1 cut(s) | 107 |
| BspLI | GGNNCC | 1 cut(s) | 887 |
| BspMI | ACCTGC | 1 cut(s) | 197 |
| BspQI | GCTCTTC | 3 cut(s) | 486, 507, 606 |
| BsrFI | RCCGGY | 1 cut(s) | 770 |
| BssAI | RCCGGY | 1 cut(s) | 770 |
| BssECI | CCNNGG | 3 cut(s) | 351, 715, 827 |
| BssMI | GATC | 4 cut(s) | 292, 472, 604, 990 |
| BssNI | GRCGYC | 1 cut(s) | 548 |
| BssT1I | CCWWGG | 1 cut(s) | 351 |
| Bst2UI | CCWGG | 1 cut(s) | 829 |
| Bst4CI | ACNGT | 1 cut(s) | 799 |
| Bst6I | CTCTTC | 4 cut(s) | 396, 486, 507, 606 |
| BstACI | GRCGYC | 1 cut(s) | 548 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 812 |
| BstC8I | GCNNGC | 2 cut(s) | 804, 1013 |
| BstDEI | CTNAG | 3 cut(s) | 845, 867, 980 |
| BstF5I | GGATG | 5 cut(s) | 90, 104, 193, 823, 967 |
| BstKTI | GATC | 4 cut(s) | 295, 475, 607, 993 |
| BstMAI | GTCTC | 2 cut(s) | 320, 395 |
| BstMBI | GATC | 4 cut(s) | 292, 472, 604, 990 |
| BstMCI | CGRYCG | 1 cut(s) | 877 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 260, 812 |
| BstNI | CCWGG | 1 cut(s) | 829 |
| BstNSI | RCATGY | 2 cut(s) | 417, 806 |
| BstSCI | CCNGG | 3 cut(s) | 715, 827, 888 |
| BstV1I | GCAGC | 4 cut(s) | 238, 296, 606, 628 |
| BstV2I | GAAGAC | 1 cut(s) | 855 |
| BstX2I | RGATCY | 1 cut(s) | 604 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 178 |
| BstYI | RGATCY | 1 cut(s) | 604 |
| BstZI | CGGCCG | 1 cut(s) | 874 |
| BsuI | GTATCC | 2 cut(s) | 428, 632 |
| BsuRI | GGCC | 2 cut(s) | 235, 876 |
| BtsCI | GGATG | 5 cut(s) | 90, 104, 193, 823, 967 |
| BveI | ACCTGC | 1 cut(s) | 197 |
| Cac8I | GCNNGC | 2 cut(s) | 804, 1013 |
| Cfr10I | RCCGGY | 1 cut(s) | 770 |
| CseI | GACGC | 1 cut(s) | 556 |
| Csp6I | GTAC | 1 cut(s) | 908 |
| CspAI | ACCGGT | 1 cut(s) | 770 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 643, 678 |
| CviAII | CATG | 3 cut(s) | 184, 414, 803 |
| CviQI | GTAC | 1 cut(s) | 908 |
| DdeI | CTNAG | 3 cut(s) | 845, 867, 980 |
| DpnI | GATC | 4 cut(s) | 294, 474, 606, 992 |
| DpnII | GATC | 4 cut(s) | 292, 472, 604, 990 |
| DraI | TTTAAA | 1 cut(s) | 85 |
| EaeI | YGGCCR | 1 cut(s) | 874 |
| EagI | CGGCCG | 1 cut(s) | 874 |
| Eam1104I | CTCTTC | 4 cut(s) | 396, 486, 507, 606 |
| EarI | CTCTTC | 4 cut(s) | 396, 486, 507, 606 |
| EclXI | CGGCCG | 1 cut(s) | 874 |
| Eco130I | CCWWGG | 1 cut(s) | 351 |
| Eco24I | GRGCYC | 1 cut(s) | 890 |
| Eco52I | CGGCCG | 1 cut(s) | 874 |
| Eco88I | CYCGRG | 1 cut(s) | 317 |
| EcoRI | GAATTC | 1 cut(s) | 377 |
| EcoRII | CCWGG | 1 cut(s) | 827 |
| EcoT14I | CCWWGG | 1 cut(s) | 351 |
| EcoT22I | ATGCAT | 1 cut(s) | 751 |
| EcoT38I | GRGCYC | 1 cut(s) | 890 |
| ErhI | CCWWGG | 1 cut(s) | 351 |
| FaeI | CATG | 3 cut(s) | 187, 417, 806 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 591, 623 |
| FatI | CATG | 3 cut(s) | 183, 413, 802 |
| FauI | CCCGC | 1 cut(s) | 789 |
| FauNDI | CATATG | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 5 cut(s) | 236, 252, 285, 617, 620 |
| FokI | GGATG | 5 cut(s) | 77, 91, 200, 810, 954 |
| FriOI | GRGCYC | 1 cut(s) | 890 |
| Fsp4HI | GCNGC | 5 cut(s) | 236, 252, 285, 617, 620 |
| FspBI | CTAG | 1 cut(s) | 96 |
| GluI | GCNGC | 5 cut(s) | 236, 252, 285, 617, 620 |
| HaeIII | GGCC | 2 cut(s) | 235, 876 |
| HapII | CCGG | 5 cut(s) | 108, 717, 771, 877, 890 |
| HgaI | GACGC | 1 cut(s) | 556 |
| Hin1I | GRCGYC | 1 cut(s) | 548 |
| Hin1II | CATG | 3 cut(s) | 187, 417, 806 |
| HinfI | GANTC | 3 cut(s) | 313, 777, 920 |
| HpaII | CCGG | 5 cut(s) | 108, 717, 771, 877, 890 |
| HphI | GGTGA | 3 cut(s) | 221, 787, 866 |
| Hpy188I | TCNGA | 3 cut(s) | 42, 942, 972 |
| Hpy188III | TCNNGA | 7 cut(s) | 108, 317, 319, 384, 461, 573, 608 |
| HpyAV | CCTTC | 7 cut(s) | 13, 119, 241, 274, 636, 802, 849 |
| HpyCH4III | ACNGT | 1 cut(s) | 799 |
| HpyCH4IV | ACGT | 1 cut(s) | 57 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 260, 812 |
| HpyF3I | CTNAG | 3 cut(s) | 845, 867, 980 |
| HpySE526I | ACGT | 1 cut(s) | 57 |
| Hsp92I | GRCGYC | 1 cut(s) | 548 |
| Hsp92II | CATG | 3 cut(s) | 187, 417, 806 |
| Kpn2I | TCCGGA | 1 cut(s) | 107 |
| Kzo9I | GATC | 4 cut(s) | 292, 472, 604, 990 |
| LguI | GCTCTTC | 3 cut(s) | 486, 507, 606 |
| LmnI | GCTCC | 1 cut(s) | 885 |
| LpnPI | CCDG | 9 cut(s) | 121, 192, 229, 730, 784, 814, 841, 890, 903 |
| Lsp1109I | GCAGC | 4 cut(s) | 238, 296, 606, 628 |
| LweI | GCATC | 2 cut(s) | 736, 802 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeII | ACGT | 1 cut(s) | 57 |
| MaeIII | GTNAC | 1 cut(s) | 53 |
| MalI | GATC | 4 cut(s) | 294, 474, 606, 992 |
| MboI | GATC | 4 cut(s) | 292, 472, 604, 990 |
| MboII | GAAGA | 8 cut(s) | 16, 413, 503, 524, 598, 614, 623, 855 |
| MfeI | CAATTG | 1 cut(s) | 153 |
| MflI | RGATCY | 1 cut(s) | 604 |
| MhlI | GDGCHC | 1 cut(s) | 890 |
| MluCI | AATT | 9 cut(s) | 34, 80, 153, 163, 201, 377, 477, 655, 682 |
| MlyI | GAGTC | 1 cut(s) | 322 |
| MmeI | TCCRAC | 1 cut(s) | 995 |
| Mph1103I | ATGCAT | 1 cut(s) | 751 |
| MroI | TCCGGA | 1 cut(s) | 107 |
| MseI | TTAA | 5 cut(s) | 84, 480, 767, 915, 1021 |
| MspA1I | CMGCKG | 1 cut(s) | 619 |
| MspI | CCGG | 5 cut(s) | 108, 717, 771, 877, 890 |
| MspR9I | CCNGG | 3 cut(s) | 717, 829, 890 |
| MunI | CAATTG | 1 cut(s) | 153 |
| Mva1269I | GAATGC | 3 cut(s) | 668, 749, 1015 |
| MvaI | CCWGG | 1 cut(s) | 829 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 260, 812 |
| NciI | CCSGG | 2 cut(s) | 717, 890 |
| NdeI | CATATG | 1 cut(s) | 138 |
| NdeII | GATC | 4 cut(s) | 292, 472, 604, 990 |
| NlaIII | CATG | 3 cut(s) | 187, 417, 806 |
| NlaIV | GGNNCC | 1 cut(s) | 887 |
| NmeAIII | GCCGAG | 1 cut(s) | 929 |
| NsiI | ATGCAT | 1 cut(s) | 751 |
| NspI | RCATGY | 2 cut(s) | 417, 806 |
| PaeI | GCATGC | 1 cut(s) | 806 |
| PaeR7I | CTCGAG | 1 cut(s) | 317 |
| PaqCI | CACCTGC | 1 cut(s) | 197 |
| PciSI | GCTCTTC | 3 cut(s) | 486, 507, 606 |
| PctI | GAATGC | 3 cut(s) | 668, 749, 1015 |
| PfeI | GAWTC | 2 cut(s) | 777, 920 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 686 |
| PinAI | ACCGGT | 1 cut(s) | 770 |
| PkrI | GCNGC | 5 cut(s) | 237, 253, 286, 618, 621 |
| PleI | GAGTC | 1 cut(s) | 321 |
| PpsI | GAGTC | 1 cut(s) | 321 |
| Psp6I | CCWGG | 1 cut(s) | 827 |
| PspGI | CCWGG | 1 cut(s) | 827 |
| PspN4I | GGNNCC | 1 cut(s) | 887 |
| PsuI | RGATCY | 1 cut(s) | 604 |
| PvuII | CAGCTG | 1 cut(s) | 619 |
| RsaI | GTAC | 1 cut(s) | 909 |
| RsaNI | GTAC | 1 cut(s) | 908 |
| SapI | GCTCTTC | 3 cut(s) | 486, 507, 606 |
| SaqAI | TTAA | 5 cut(s) | 84, 480, 767, 915, 1021 |
| SatI | GCNGC | 5 cut(s) | 236, 252, 285, 617, 620 |
| Sau3AI | GATC | 4 cut(s) | 292, 472, 604, 990 |
| SchI | GAGTC | 1 cut(s) | 322 |
| ScrFI | CCNGG | 3 cut(s) | 717, 829, 890 |
| SduI | GDGCHC | 1 cut(s) | 890 |
| SfaNI | GCATC | 2 cut(s) | 736, 802 |
| Sfr274I | CTCGAG | 1 cut(s) | 317 |
| SlaI | CTCGAG | 1 cut(s) | 317 |
| SmlI | CTYRAG | 1 cut(s) | 317 |
| SmoI | CTYRAG | 1 cut(s) | 317 |
| SphI | GCATGC | 1 cut(s) | 806 |
| Sse9I | AATT | 9 cut(s) | 34, 80, 153, 163, 201, 377, 477, 655, 682 |
| SsiI | CCGC | 3 cut(s) | 236, 593, 782 |
| SspMI | CTAG | 1 cut(s) | 96 |
| StyD4I | CCNGG | 3 cut(s) | 715, 827, 888 |
| StyI | CCWWGG | 1 cut(s) | 351 |
| TaaI | ACNGT | 1 cut(s) | 799 |
| TaiI | ACGT | 1 cut(s) | 60 |
| TaqI | TCGA | 6 cut(s) | 318, 369, 385, 432, 475, 810 |
| TasI | AATT | 9 cut(s) | 34, 80, 153, 163, 201, 377, 477, 655, 682 |
| TatI | WGTACW | 1 cut(s) | 907 |
| TauI | GCSGC | 1 cut(s) | 238 |
| TfiI | GAWTC | 2 cut(s) | 777, 920 |
| Tru1I | TTAA | 5 cut(s) | 84, 480, 767, 915, 1021 |
| Tru9I | TTAA | 5 cut(s) | 84, 480, 767, 915, 1021 |
| TseI | GCWGC | 4 cut(s) | 251, 284, 616, 619 |
| TspDTI | ATGAA | 3 cut(s) | 17, 138, 390 |
| TspGWI | ACGGA | 1 cut(s) | 283 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 686 |
| XapI | RAATTY | 3 cut(s) | 163, 377, 682 |
| XceI | RCATGY | 2 cut(s) | 417, 806 |
| XhoI | CTCGAG | 1 cut(s) | 317 |
| XspI | CTAG | 1 cut(s) | 96 |
| Zsp2I | ATGCAT | 1 cut(s) | 751 |