Rmu_ssc0000084.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000084.1
OG0000127
Physical Location & Seq
Reverse (-)
30061 .. 32236
2176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000084.1_g000006.1.cds

Sequence Viewer

Length: 1260 bp
atgacccagctcactattcacctttccaccgggcttggggcaaaaccacagtgggatgcccaggtcactaactcgggtaggagggtgaccgagcccgtgacccaggatgccagcgtggcccaaaaaactgacgctcggggagacgcgccgtgggggggaagtgaagcgcagtttcttgtcactaatgaagacattcaattgtgcaagtcttggagggctgttagccaagatccggcaaagggtacggaacgaagaaaagatgatctatggttagagctacgtcaagcacaagatttgtggagagctgcgatgaccaaatctaaaggaaaacaaaaaaaaggtgatttcattaatttagaatgttacgagattgttaaagggtttcaacaatttgaagacattccaaaccattcctcttcggctggaggaacctccagaggaggaactgaacggatgcacacacaacaatccgctcctgattctcatgtccagttggacatagatgcagatgaggtaaacgccgatgcaactccaaatccttcggtgaggcctcaaggaaagaaggctgccaaagaagctcttcggaaaggaaagaaagcatctaatgattccagtcctctgacagccgctgtggagactatagcaaccaaccaaacatcaatgatgtctgccaaggagaaacgtgatgaggaatatgctcgacatctccgtgaccaacaacaacgagattatatacgcttgcaaatggatatgcgaaacgaggcattcaaaattcaagagagggaagagcatattatggagatgggcacaagtaagatgacgccaaccaaaaagaattactggcaaagaaaacaaaaaaaaattggagagaaagaagctgaagatgcaacccgcggatctaacattccacaaccaccattccccggtgggtattatccacaatctccttctccggtggctatccacaacctcctttccctggtggctatccacaacctcatttccccggtggctatccacaaccaccattccccggtgggtattatccacaatctcctttccccggtggcttcccacaaccaccattcaccggtggtgtcccttccccacctttctcttcgggtgaatccaccaaccccaaccatatggatgaccccacaagaacaaattggattcctaatgaagatgaggattaggaaaattagggagttatatattttaaataattgtattgttatgattccaatggttggtttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

419

Amino Acids

47.0

Weight (kDa)

9.13

Isoelectric Point (pI)

55.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000127)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1250
AccBSI CCGCTC 1 cut(s) 473
AccII CGCG 2 cut(s) 146, 894
AciI CCGC 4 cut(s) 471, 627, 892, 894
AclWI GGATC 2 cut(s) 224, 904
AcsI RAATTY 1 cut(s) 771
AcuI CTGAAG 1 cut(s) 900
AcyI GRCGYC 1 cut(s) 821
AfaI GTAC 1 cut(s) 244
AgeI ACCGGT 1 cut(s) 1090
AgsI TTSAA 5 cut(s) 197, 386, 395, 769, 776
AjnI CCWGG 3 cut(s) 60, 102, 978
AluBI AGCT 5 cut(s) 10, 277, 305, 578, 878
AluI AGCT 5 cut(s) 10, 277, 305, 578, 878
Alw26I GTCTC 2 cut(s) 135, 629
AlwI GGATC 2 cut(s) 224, 904
AlwNI CAGNNNCTG 1 cut(s) 629
Ama87I CYCGRG 2 cut(s) 73, 135
AoxI GGCC 2 cut(s) 117, 548
ApeKI GCWGC 2 cut(s) 305, 566
ApoI RAATTY 1 cut(s) 771
AseI ATTAAT 1 cut(s) 351
AsiGI ACCGGT 1 cut(s) 1090
Asp700I GAANNNNTTC 3 cut(s) 192, 399, 579
AspLEI GCGC 2 cut(s) 148, 169
AspS9I GGNCC 1 cut(s) 118
AsuC2I CCSGG 5 cut(s) 31, 924, 1007, 1034, 1064
AsuHPI GGTGA 6 cut(s) 11, 97, 353, 556, 1080, 1135
AvaI CYCGRG 2 cut(s) 73, 135
BaeGI GKGCMC 1 cut(s) 809
BanII GRGCYC 1 cut(s) 96
BbsI GAAGAC 2 cut(s) 195, 402
BbvI GCAGC 2 cut(s) 292, 553
BccI CCATC 1 cut(s) 796
BceAI ACGGC 1 cut(s) 133
BciT130I CCWGG 3 cut(s) 62, 104, 980
BcnI CCSGG 5 cut(s) 31, 924, 1007, 1034, 1064
BcoDI GTCTC 2 cut(s) 135, 629
BfmI CTRYAG 1 cut(s) 639
BglI GCCNNNNNGGC 1 cut(s) 116
BisI GCNGC 3 cut(s) 306, 567, 627
BlsI GCNGC 3 cut(s) 307, 568, 628
Bme1390I CCNGG 8 cut(s) 31, 62, 104, 924, 980, 1007, 1034, 1064
BmeT110I CYCGRG 2 cut(s) 73, 135
BmgT120I GGNCC 1 cut(s) 118
BmiI GGNNCC 1 cut(s) 430
BmrFI CCNGG 8 cut(s) 31, 62, 104, 924, 980, 1007, 1034, 1064
BmsI GCATC 7 cut(s) 46, 97, 444, 493, 514, 608, 874
BpiI GAAGAC 2 cut(s) 195, 402
BpmI CTGGAG 2 cut(s) 418, 444
BpuEI CTTGAG 1 cut(s) 537
BpuMI CCSGG 5 cut(s) 31, 924, 1007, 1034, 1064
BsaHI GRCGYC 1 cut(s) 821
BsaWI WCCGGW 2 cut(s) 952, 1090
Bse118I RCCGGY 1 cut(s) 1090
Bse1I ACTGG 3 cut(s) 490, 612, 845
BseBI CCWGG 3 cut(s) 62, 104, 980
BseGI GGATG 4 cut(s) 61, 112, 459, 1155
BseNI ACTGG 3 cut(s) 490, 612, 845
BseRI GAGGAG 1 cut(s) 453
BseSI GKGCMC 1 cut(s) 809
BseXI GCAGC 2 cut(s) 292, 553
BseYI CCCAGC 1 cut(s) 6
Bsh1236I CGCG 2 cut(s) 146, 894
BshFI GGCC 2 cut(s) 119, 550
BshTI ACCGGT 1 cut(s) 1090
BsiHKCI CYCGRG 2 cut(s) 73, 135
BsiSI CCGG 8 cut(s) 30, 233, 924, 953, 1007, 1034, 1064, 1091
BslFI GGGAC 1 cut(s) 1084
BsmAI GTCTC 2 cut(s) 135, 629
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 1 cut(s) 1084
BsmI GAATGC 1 cut(s) 764
BsnI GGCC 2 cut(s) 119, 550
BsoBI CYCGRG 2 cut(s) 73, 135
Bsp1286I GDGCHC 2 cut(s) 96, 809
Bsp143I GATC 3 cut(s) 229, 262, 896
BspACI CCGC 4 cut(s) 471, 627, 892, 894
BspANI GGCC 2 cut(s) 119, 550
BspFNI CGCG 2 cut(s) 146, 894
BspLI GGNNCC 1 cut(s) 430
BspPI GGATC 2 cut(s) 224, 904
BspQI GCTCTTC 2 cut(s) 585, 780
BsrBI CCGCTC 1 cut(s) 473
BsrFI RCCGGY 1 cut(s) 1090
BsrI ACTGG 3 cut(s) 490, 612, 845
BssAI RCCGGY 1 cut(s) 1090
BssMI GATC 3 cut(s) 229, 262, 896
BssNI GRCGYC 1 cut(s) 821
BssT1I CCWWGG 1 cut(s) 672
Bst2UI CCWGG 3 cut(s) 62, 104, 980
Bst4CI ACNGT 1 cut(s) 51
Bst6I CTCTTC 4 cut(s) 421, 585, 780, 1122
BstACI GRCGYC 1 cut(s) 821
BstC8I GCNNGC 2 cut(s) 112, 740
BstDSI CCRYGG 2 cut(s) 149, 892
BstEII GGTNACC 1 cut(s) 85
BstF5I GGATG 4 cut(s) 61, 112, 459, 1155
BstFNI CGCG 2 cut(s) 146, 894
BstHHI GCGC 2 cut(s) 148, 169
BstKTI GATC 3 cut(s) 232, 265, 899
BstMAI GTCTC 2 cut(s) 135, 629
BstMBI GATC 3 cut(s) 229, 262, 896
BstMWI GCNNNNNNNGC 3 cut(s) 116, 575, 884
BstNI CCWGG 3 cut(s) 62, 104, 980
BstPI GGTNACC 1 cut(s) 85
BstSCI CCNGG 8 cut(s) 29, 60, 102, 922, 978, 1005, 1032, 1062
BstSFI CTRYAG 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 809
BstUI CGCG 2 cut(s) 146, 894
BstV1I GCAGC 2 cut(s) 292, 553
BstV2I GAAGAC 2 cut(s) 195, 402
BstX2I RGATCY 2 cut(s) 229, 896
BstXI CCANNNNNNTGG 1 cut(s) 1146
BstYI RGATCY 2 cut(s) 229, 896
BsuRI GGCC 2 cut(s) 119, 550
BtgI CCRYGG 2 cut(s) 149, 892
BtgZI GCGATG 1 cut(s) 323
BtsCI GGATG 4 cut(s) 61, 112, 459, 1155
BtsIMutI CAGTG 1 cut(s) 56
Cac8I GCNNGC 2 cut(s) 112, 740
CaiI CAGNNNCTG 1 cut(s) 629
CfoI GCGC 2 cut(s) 148, 169
Cfr10I RCCGGY 1 cut(s) 1090
Cfr13I GGNCC 1 cut(s) 118
Cfr42I CCGCGG 1 cut(s) 895
CseI GACGC 3 cut(s) 140, 152, 829
Csp6I GTAC 1 cut(s) 243
CspAI ACCGGT 1 cut(s) 1090
CspCI CAANNNNNGTGG 4 cut(s) 16, 51, 278, 313
CviAII CATG 1 cut(s) 485
CviQI GTAC 1 cut(s) 243
DpnI GATC 3 cut(s) 231, 264, 898
DpnII GATC 3 cut(s) 229, 262, 896
DraI TTTAAA 1 cut(s) 1221
Eam1104I CTCTTC 4 cut(s) 421, 585, 780, 1122
EarI CTCTTC 4 cut(s) 421, 585, 780, 1122
Eco130I CCWWGG 1 cut(s) 672
Eco147I AGGCCT 1 cut(s) 550
Eco24I GRGCYC 1 cut(s) 96
Eco57I CTGAAG 1 cut(s) 900
Eco88I CYCGRG 2 cut(s) 73, 135
Eco91I GGTNACC 1 cut(s) 85
EcoO65I GGTNACC 1 cut(s) 85
EcoRII CCWGG 3 cut(s) 60, 102, 978
EcoT14I CCWWGG 1 cut(s) 672
EcoT38I GRGCYC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 672
Esp3I CGTCTC 1 cut(s) 135
FaeI CATG 1 cut(s) 488
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 1 cut(s) 1084
FatI CATG 1 cut(s) 484
FauI CCCGC 1 cut(s) 899
FauNDI CATATG 1 cut(s) 1145
Fnu4HI GCNGC 3 cut(s) 306, 567, 627
FokI GGATG 4 cut(s) 68, 119, 466, 1162
FriOI GRGCYC 1 cut(s) 96
Fsp4HI GCNGC 3 cut(s) 306, 567, 627
GlaI GCGC 2 cut(s) 147, 168
GluI GCNGC 3 cut(s) 306, 567, 627
GsaI CCCAGC 1 cut(s) 10
GsuI CTGGAG 2 cut(s) 418, 444
HaeIII GGCC 2 cut(s) 119, 550
HapII CCGG 8 cut(s) 30, 233, 924, 953, 1007, 1034, 1064, 1091
HgaI GACGC 3 cut(s) 140, 152, 829
HhaI GCGC 2 cut(s) 148, 169
Hin1I GRCGYC 1 cut(s) 821
Hin1II CATG 1 cut(s) 488
Hin6I GCGC 2 cut(s) 146, 167
HinP1I GCGC 2 cut(s) 146, 167
HinfI GANTC 5 cut(s) 479, 608, 1126, 1173, 1240
HpaII CCGG 8 cut(s) 30, 233, 924, 953, 1007, 1034, 1064, 1091
HphI GGTGA 6 cut(s) 11, 97, 353, 556, 1080, 1135
Hpy166II GTNNAC 1 cut(s) 517
Hpy188I TCNGA 2 cut(s) 585, 621
Hpy188III TCNNGA 3 cut(s) 435, 476, 776
Hpy8I GTNNAC 1 cut(s) 517
HpyAV CCTTC 4 cut(s) 549, 556, 957, 1112
HpyCH4III ACNGT 1 cut(s) 51
HpyCH4IV ACGT 2 cut(s) 280, 682
HpyCH4V TGCA 6 cut(s) 204, 457, 506, 527, 742, 887
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 575, 884
HpySE526I ACGT 2 cut(s) 280, 682
Hsp92I GRCGYC 1 cut(s) 821
Hsp92II CATG 1 cut(s) 488
HspAI GCGC 2 cut(s) 146, 167
KspI CCGCGG 1 cut(s) 895
Kzo9I GATC 3 cut(s) 229, 262, 896
LguI GCTCTTC 2 cut(s) 585, 780
LmnI GCTCC 1 cut(s) 478
Lsp1109I GCAGC 2 cut(s) 292, 553
LweI GCATC 7 cut(s) 46, 97, 444, 493, 514, 608, 874
MaeII ACGT 2 cut(s) 280, 682
MaeIII GTNAC 6 cut(s) 64, 85, 97, 178, 362, 710
MalI GATC 3 cut(s) 231, 264, 898
MbiI CCGCTC 1 cut(s) 473
MboI GATC 3 cut(s) 229, 262, 896
MboII GAAGA 9 cut(s) 200, 264, 407, 408, 572, 797, 893, 1109, 1195
MfeI CAATTG 1 cut(s) 197
MflI RGATCY 2 cut(s) 229, 896
MhlI GDGCHC 2 cut(s) 96, 809
MluCI AATT 9 cut(s) 197, 352, 389, 771, 835, 861, 1167, 1200, 1225
MmeI TCCRAC 1 cut(s) 474
MroXI GAANNNNTTC 3 cut(s) 192, 399, 579
MseI TTAA 3 cut(s) 351, 375, 1220
MslI CAYNNNNRTG 2 cut(s) 708, 1148
MspA1I CMGCKG 2 cut(s) 629, 894
MspI CCGG 8 cut(s) 30, 233, 924, 953, 1007, 1034, 1064, 1091
MspR9I CCNGG 8 cut(s) 31, 62, 104, 924, 980, 1007, 1034, 1064
MunI CAATTG 1 cut(s) 197
Mva1269I GAATGC 1 cut(s) 764
MvaI CCWGG 3 cut(s) 62, 104, 980
MvnI CGCG 2 cut(s) 146, 894
MwoI GCNNNNNNNGC 3 cut(s) 116, 575, 884
NciI CCSGG 5 cut(s) 31, 924, 1007, 1034, 1064
NdeI CATATG 1 cut(s) 1145
NdeII GATC 3 cut(s) 229, 262, 896
NlaIII CATG 1 cut(s) 488
NlaIV GGNNCC 1 cut(s) 430
NmuCI GTSAC 5 cut(s) 64, 85, 97, 178, 710
PceI AGGCCT 1 cut(s) 550
PciSI GCTCTTC 2 cut(s) 585, 780
PcsI WCGNNNNNNNCGW 1 cut(s) 706
PctI GAATGC 1 cut(s) 764
PdmI GAANNNNTTC 3 cut(s) 192, 399, 579
PfeI GAWTC 5 cut(s) 479, 608, 1126, 1173, 1240
PflMI CCANNNNNTGG 1 cut(s) 1250
PinAI ACCGGT 1 cut(s) 1090
PkrI GCNGC 3 cut(s) 307, 568, 628
PshBI ATTAAT 1 cut(s) 351
Psp6I CCWGG 3 cut(s) 60, 102, 978
PspEI GGTNACC 1 cut(s) 85
PspFI CCCAGC 1 cut(s) 6
PspGI CCWGG 3 cut(s) 60, 102, 978
PspN4I GGNNCC 1 cut(s) 430
PspPI GGNCC 1 cut(s) 118
PstNI CAGNNNCTG 1 cut(s) 629
PsuI RGATCY 2 cut(s) 229, 896
RsaI GTAC 1 cut(s) 244
RsaNI GTAC 1 cut(s) 243
RseI CAYNNNNRTG 2 cut(s) 708, 1148
SacII CCGCGG 1 cut(s) 895
SapI GCTCTTC 2 cut(s) 585, 780
SaqAI TTAA 3 cut(s) 351, 375, 1220
SatI GCNGC 3 cut(s) 306, 567, 627
Sau3AI GATC 3 cut(s) 229, 262, 896
Sau96I GGNCC 1 cut(s) 118
ScrFI CCNGG 8 cut(s) 31, 62, 104, 924, 980, 1007, 1034, 1064
SduI GDGCHC 2 cut(s) 96, 809
SfaNI GCATC 7 cut(s) 46, 97, 444, 493, 514, 608, 874
SfcI CTRYAG 1 cut(s) 639
Sfr303I CCGCGG 1 cut(s) 895
SgrAI CRCCGGYG 1 cut(s) 1090
SgrBI CCGCGG 1 cut(s) 895
SmiMI CAYNNNNRTG 2 cut(s) 708, 1148
SmlI CTYRAG 1 cut(s) 552
SmoI CTYRAG 1 cut(s) 552
Sse9I AATT 9 cut(s) 197, 352, 389, 771, 835, 861, 1167, 1200, 1225
SseBI AGGCCT 1 cut(s) 550
SsiI CCGC 4 cut(s) 471, 627, 892, 894
StuI AGGCCT 1 cut(s) 550
StyD4I CCNGG 8 cut(s) 29, 60, 102, 922, 978, 1005, 1032, 1062
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 1 cut(s) 51
TaiI ACGT 2 cut(s) 283, 685
TaqI TCGA 1 cut(s) 700
TaqII GACCGA 1 cut(s) 104
TasI AATT 9 cut(s) 197, 352, 389, 771, 835, 861, 1167, 1200, 1225
TauI GCSGC 1 cut(s) 629
TfiI GAWTC 5 cut(s) 479, 608, 1126, 1173, 1240
Tru1I TTAA 3 cut(s) 351, 375, 1220
Tru9I TTAA 3 cut(s) 351, 375, 1220
TscAI CASTG 1 cut(s) 56
TseFI GTSAC 5 cut(s) 64, 85, 97, 178, 710
TseI GCWGC 2 cut(s) 305, 566
Tsp45I GTSAC 5 cut(s) 64, 85, 97, 178, 710
TspDTI ATGAA 3 cut(s) 201, 337, 1196
TspGWI ACGGA 3 cut(s) 260, 466, 698
TspRI CASTG 1 cut(s) 56
Van91I CCANNNNNTGG 1 cut(s) 1250
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 1 cut(s) 771
XmnI GAANNNNTTC 3 cut(s) 192, 399, 579
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.