Rmu_sc0003759.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003759.1
OG0000127
Physical Location & Seq
Forward (+)
30511 .. 37847
7337 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003759.1_g000008.1.cds

Sequence Viewer

Length: 1353 bp
atggcatgggcccccggaaaatggaagcctctgtttgtctctactaaatataaaaaatgcatcccattccttcctagtcaaaaaacagtgggtgttccatctttcccgagctcgaaaagtgctttgctggcggcactactagcaccaccgcctcttcttgttttaagcaacgacaggcggcctgagagacctccacgtgtttatgtgaaaagcatcacgtctaaatggaaaccgcggggtaagtatgtacgtttgtctcctcgagctagctcgtgtgttgtgtgtgtcggagtctccgagagaatcagtagagcaagtccagcggccgccttccagctcagccctaagctatcgtggctgacgtcatcaggcttcagtgggatcatggacgttctgcaggcgcgcgtgctggcgagattctcgtcttctagtgccgaaaagttgatggcgcgtgttgcagccgtgtttgtcgcgttgaacaaaggggaaccacacgtccagtggccggacatatgggagatcaaagtggagatgataataccgaaaagaaaaggagatggatggatggggaagatgttcaattgtgcaagtcttggaaagctcaaggccgccttccagctcagccctaagctatcgtggctgacgtcatcaggcttcagtgggatcatggacgttctgcaggcgcgcgtgctggcgagattctcgtcttcttgcgccgaaaagttgatggcgcgtgttgcagccgtgtttgtcgcgggaaccacacgtccagtggccggacgcatgggagatcaaagtggagatgataataccgaaaagaaaaggagatggacggatggggaagatgttcaattgtgcaagtcttggaaagctgtaattgcaggtgaaactgtagatcctaatgtgaggcctcaaggaaggaaggctgcgaaagaagcaattcggaaaggaaaaaaggcagcgaaagatcaaagttttttgtcaagcacactcgagaatatagcgaacaaccaaatagagccaaccgcgggcaagaaaaaactcaatgaggaattcgctcaaagtctccaagaggaaaatcaacgagcatgtatcctcttgcaaatcgaaatgcgacaagagcaactcctattacaagatagggaagagcgaattaaagagaggaaagagcgaaataaagagagggaagagagtattatggagattgatacaagtcaaatgacgccaaataaaaagcgttattggttaagaaagcaaaagaagatagcggagaaagaagaacttggcgagcagatgccaccttctatgggtggatactatccgcaacccaattttggtggtgcattcccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

450

Amino Acids

50.27

Weight (kDa)

9.95

Isoelectric Point (pI)

55.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000127)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 872
AatII GACGTC 2 cut(s) 365, 647
Acc36I ACCTGC 1 cut(s) 872
AclWI GGATC 3 cut(s) 389, 671, 890
AcoI YGGCCR 3 cut(s) 324, 503, 774
AcsI RAATTY 1 cut(s) 1052
AcuI CTGAAG 2 cut(s) 358, 640
AcvI CACGTG 1 cut(s) 197
AcyI GRCGYC 3 cut(s) 362, 644, 1223
AfaI GTAC 1 cut(s) 249
AfiI CCNNNNNNNGG 6 cut(s) 21, 505, 776, 1028, 1307, 1334
AflIII ACRYGT 3 cut(s) 196, 493, 764
AgsI TTSAA 3 cut(s) 478, 580, 851
AjiI CACGTC 3 cut(s) 219, 496, 767
AloI GAACNNNNNNTCC 4 cut(s) 480, 512, 751, 783
AluBI AGCT 9 cut(s) 111, 266, 270, 337, 349, 601, 619, 631, 872
AluI AGCT 9 cut(s) 111, 266, 270, 337, 349, 601, 619, 631, 872
Alw21I GWGCWC 1 cut(s) 113
Alw26I GTCTC 5 cut(s) 43, 181, 261, 298, 1070
AlwI GGATC 3 cut(s) 389, 671, 890
Ama87I CYCGRG 3 cut(s) 106, 261, 992
AoxI GGCC 7 cut(s) 9, 179, 324, 503, 606, 774, 908
ApaI GGGCCC 1 cut(s) 13
ApeKI GCWGC 4 cut(s) 458, 740, 926, 959
ApoI RAATTY 1 cut(s) 1052
Asp700I GAANNNNTTC 3 cut(s) 575, 846, 939
AspLEI GCGC 7 cut(s) 403, 405, 451, 685, 687, 716, 733
AspS9I GGNCC 2 cut(s) 9, 10
AsuC2I CCSGG 1 cut(s) 15
AsuHPI GGTGA 1 cut(s) 896
AsuNHI GCTAGC 1 cut(s) 266
AvaI CYCGRG 3 cut(s) 106, 261, 992
BaeGI GKGCMC 1 cut(s) 13
BanII GRGCYC 2 cut(s) 13, 113
BauI CACGAG 1 cut(s) 271
BbrPI CACGTG 1 cut(s) 197
BbsI GAAGAC 2 cut(s) 417, 699
Bbv12I GWGCWC 1 cut(s) 113
BbvI GCAGC 4 cut(s) 470, 752, 913, 971
BccI CCATC 8 cut(s) 106, 439, 551, 555, 559, 721, 822, 830
BceAI ACGGC 2 cut(s) 446, 728
BciVI GTATCC 2 cut(s) 1103, 1307
BcnI CCSGG 1 cut(s) 15
BcoDI GTCTC 5 cut(s) 43, 181, 261, 298, 1070
BfaI CTAG 4 cut(s) 75, 140, 267, 429
BfmI CTRYAG 3 cut(s) 395, 677, 891
BfuAI ACCTGC 1 cut(s) 872
BfuI GTATCC 2 cut(s) 1103, 1307
BisI GCNGC 9 cut(s) 132, 179, 324, 327, 459, 609, 741, 927, 960
BlpI GCTNAGC 2 cut(s) 338, 620
BlsI GCNGC 9 cut(s) 133, 180, 325, 328, 460, 610, 742, 928, 961
Bme1390I CCNGG 1 cut(s) 15
BmeT110I CYCGRG 3 cut(s) 106, 261, 992
BmgBI CACGTC 3 cut(s) 219, 496, 767
BmgT120I GGNCC 2 cut(s) 9, 10
BmiI GGNNCC 4 cut(s) 11, 12, 489, 760
BmrFI CCNGG 1 cut(s) 15
BmsI GCATC 3 cut(s) 69, 222, 1284
BmtI GCTAGC 1 cut(s) 270
BpiI GAAGAC 2 cut(s) 417, 699
Bpu10I CCTNAGC 2 cut(s) 345, 627
Bpu1102I GCTNAGC 2 cut(s) 338, 620
BpuEI CTTGAG 2 cut(s) 587, 897
BpuMI CCSGG 1 cut(s) 15
BsaAI YACGTR 1 cut(s) 197
BsaHI GRCGYC 3 cut(s) 362, 644, 1223
BsaI GGTCTC 1 cut(s) 181
BsaJI CCNNGG 3 cut(s) 13, 233, 1026
Bsc4I CCNNNNNNNGG 6 cut(s) 21, 505, 776, 1028, 1307, 1334
Bse1I ACTGG 2 cut(s) 499, 770
BseDI CCNNGG 3 cut(s) 13, 233, 1026
BseGI GGATG 4 cut(s) 60, 566, 570, 841
BseLI CCNNNNNNNGG 6 cut(s) 21, 505, 776, 1028, 1307, 1334
BseMII CTCAG 3 cut(s) 174, 352, 634
BseNI ACTGG 2 cut(s) 499, 770
BsePI GCGCGC 2 cut(s) 401, 683
BseRI GAGGAG 1 cut(s) 249
BseSI GKGCMC 1 cut(s) 13
BseX3I CGGCCG 1 cut(s) 324
BseXI GCAGC 4 cut(s) 470, 752, 913, 971
Bsh1285I CGRYCG 1 cut(s) 327
BshFI GGCC 7 cut(s) 11, 181, 326, 505, 608, 776, 910
BsiEI CGRYCG 1 cut(s) 327
BsiHKAI GWGCWC 1 cut(s) 113
BsiHKCI CYCGRG 3 cut(s) 106, 261, 992
BsiSI CCGG 3 cut(s) 15, 506, 777
BslI CCNNNNNNNGG 6 cut(s) 21, 505, 776, 1028, 1307, 1334
BsmAI GTCTC 5 cut(s) 43, 181, 261, 298, 1070
BsmI GAATGC 1 cut(s) 1343
BsnI GGCC 7 cut(s) 11, 181, 326, 505, 608, 776, 910
Bso31I GGTCTC 1 cut(s) 181
BsoBI CYCGRG 3 cut(s) 106, 261, 992
Bsp120I GGGCCC 1 cut(s) 9
Bsp1286I GDGCHC 2 cut(s) 13, 113
Bsp143I GATC 6 cut(s) 381, 519, 663, 790, 895, 967
Bsp1720I GCTNAGC 2 cut(s) 338, 620
BspANI GGCC 7 cut(s) 11, 181, 326, 505, 608, 776, 910
BspCNI CTCAG 3 cut(s) 175, 351, 633
BspLI GGNNCC 4 cut(s) 11, 12, 489, 760
BspMAI CTGCAG 2 cut(s) 399, 681
BspMI ACCTGC 1 cut(s) 872
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 3 cut(s) 389, 671, 890
BspQI GCTCTTC 1 cut(s) 1140
BspTNI GGTCTC 1 cut(s) 181
BsrI ACTGG 2 cut(s) 499, 770
BssECI CCNNGG 3 cut(s) 13, 233, 1026
BssHII GCGCGC 2 cut(s) 401, 683
BssMI GATC 6 cut(s) 381, 519, 663, 790, 895, 967
BssNI GRCGYC 3 cut(s) 362, 644, 1223
BssSI CACGAG 1 cut(s) 271
Bst2BI CACGAG 1 cut(s) 271
Bst4CI ACNGT 2 cut(s) 88, 892
Bst6I CTCTTC 3 cut(s) 159, 1140, 1182
BstACI GRCGYC 3 cut(s) 362, 644, 1223
BstBAI YACGTR 1 cut(s) 197
BstDEI CTNAG 5 cut(s) 183, 338, 345, 620, 627
BstDSI CCRYGG 2 cut(s) 233, 1026
BstF5I GGATG 4 cut(s) 60, 566, 570, 841
BstHHI GCGC 7 cut(s) 403, 405, 451, 685, 687, 716, 733
BstKTI GATC 6 cut(s) 384, 522, 666, 793, 898, 970
BstMAI GTCTC 5 cut(s) 43, 181, 261, 298, 1070
BstMBI GATC 6 cut(s) 381, 519, 663, 790, 895, 967
BstMCI CGRYCG 1 cut(s) 327
BstNSI RCATGY 1 cut(s) 1092
BstSCI CCNGG 1 cut(s) 13
BstSFI CTRYAG 3 cut(s) 395, 677, 891
BstSLI GKGCMC 1 cut(s) 13
BstV1I GCAGC 4 cut(s) 470, 752, 913, 971
BstV2I GAAGAC 2 cut(s) 417, 699
BstX2I RGATCY 1 cut(s) 895
BstYI RGATCY 1 cut(s) 895
BstZI CGGCCG 1 cut(s) 324
BsuI GTATCC 2 cut(s) 1103, 1307
BsuRI GGCC 7 cut(s) 11, 181, 326, 505, 608, 776, 910
BtgI CCRYGG 2 cut(s) 233, 1026
BtrI CACGTC 3 cut(s) 219, 496, 767
BtsCI GGATG 4 cut(s) 60, 566, 570, 841
BtsIMutI CAGTG 5 cut(s) 93, 382, 506, 664, 777
BveI ACCTGC 1 cut(s) 872
CciNI GCGGCCGC 1 cut(s) 324
CfoI GCGC 7 cut(s) 403, 405, 451, 685, 687, 716, 733
Cfr13I GGNCC 2 cut(s) 9, 10
Cfr42I CCGCGG 2 cut(s) 236, 1029
CseI GACGC 2 cut(s) 789, 1231
Csp6I GTAC 1 cut(s) 248
CspCI CAANNNNNGTGG 2 cut(s) 1318, 1353
CviAII CATG 5 cut(s) 6, 385, 667, 784, 1089
CviQI GTAC 1 cut(s) 248
DdeI CTNAG 5 cut(s) 183, 338, 345, 620, 627
DpnI GATC 6 cut(s) 383, 521, 665, 792, 897, 969
DpnII GATC 6 cut(s) 381, 519, 663, 790, 895, 967
EaeI YGGCCR 3 cut(s) 324, 503, 774
EagI CGGCCG 1 cut(s) 324
Eam1104I CTCTTC 3 cut(s) 159, 1140, 1182
EarI CTCTTC 3 cut(s) 159, 1140, 1182
Ecl136II GAGCTC 1 cut(s) 111
EclXI CGGCCG 1 cut(s) 324
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 2 cut(s) 13, 113
Eco31I GGTCTC 1 cut(s) 181
Eco52I CGGCCG 1 cut(s) 324
Eco53kI GAGCTC 1 cut(s) 111
Eco57I CTGAAG 2 cut(s) 358, 640
Eco72I CACGTG 1 cut(s) 197
Eco88I CYCGRG 3 cut(s) 106, 261, 992
EcoICRI GAGCTC 1 cut(s) 111
EcoO109I RGGNCCY 1 cut(s) 10
EcoRI GAATTC 1 cut(s) 1052
EcoT22I ATGCAT 1 cut(s) 62
EcoT38I GRGCYC 2 cut(s) 13, 113
FaeI CATG 5 cut(s) 9, 388, 670, 787, 1092
FalI AAGNNNNNCTT 4 cut(s) 596, 628, 1266, 1298
FatI CATG 5 cut(s) 5, 384, 666, 783, 1088
FauI CCCGC 3 cut(s) 228, 748, 1021
FauNDI CATATG 1 cut(s) 512
Fnu4HI GCNGC 9 cut(s) 132, 179, 324, 327, 459, 609, 741, 927, 960
FokI GGATG 4 cut(s) 47, 573, 577, 848
FriOI GRGCYC 2 cut(s) 13, 113
Fsp4HI GCNGC 9 cut(s) 132, 179, 324, 327, 459, 609, 741, 927, 960
FspBI CTAG 4 cut(s) 75, 140, 267, 429
GlaI GCGC 7 cut(s) 402, 404, 450, 684, 686, 715, 732
GluI GCNGC 9 cut(s) 132, 179, 324, 327, 459, 609, 741, 927, 960
HaeIII GGCC 7 cut(s) 11, 181, 326, 505, 608, 776, 910
HapII CCGG 3 cut(s) 15, 506, 777
HgaI GACGC 2 cut(s) 789, 1231
HhaI GCGC 7 cut(s) 403, 405, 451, 685, 687, 716, 733
Hin1I GRCGYC 3 cut(s) 362, 644, 1223
Hin1II CATG 5 cut(s) 9, 388, 670, 787, 1092
Hin6I GCGC 7 cut(s) 401, 403, 449, 683, 685, 714, 731
HinP1I GCGC 7 cut(s) 401, 403, 449, 683, 685, 714, 731
HinfI GANTC 4 cut(s) 291, 303, 417, 699
HpaII CCGG 3 cut(s) 15, 506, 777
HphI GGTGA 1 cut(s) 896
Hpy188I TCNGA 3 cut(s) 290, 298, 945
Hpy188III TCNNGA 2 cut(s) 106, 994
HpyAV CCTTC 6 cut(s) 80, 340, 622, 912, 916, 1311
HpyCH4III ACNGT 2 cut(s) 88, 892
HpyCH4IV ACGT 9 cut(s) 196, 218, 250, 362, 390, 495, 644, 672, 766
HpyF3I CTNAG 5 cut(s) 183, 338, 345, 620, 627
HpySE526I ACGT 9 cut(s) 196, 218, 250, 362, 390, 495, 644, 672, 766
Hsp92I GRCGYC 3 cut(s) 362, 644, 1223
Hsp92II CATG 5 cut(s) 9, 388, 670, 787, 1092
HspAI GCGC 7 cut(s) 401, 403, 449, 683, 685, 714, 731
KspI CCGCGG 2 cut(s) 236, 1029
Kzo9I GATC 6 cut(s) 381, 519, 663, 790, 895, 967
LguI GCTCTTC 1 cut(s) 1140
Lsp1109I GCAGC 4 cut(s) 470, 752, 913, 971
LweI GCATC 3 cut(s) 69, 222, 1284
MaeI CTAG 4 cut(s) 75, 140, 267, 429
MaeII ACGT 9 cut(s) 196, 218, 250, 362, 390, 495, 644, 672, 766
MalI GATC 6 cut(s) 383, 521, 665, 792, 897, 969
MboI GATC 6 cut(s) 381, 519, 663, 790, 895, 967
MboII GAAGA 9 cut(s) 146, 417, 583, 699, 854, 1157, 1199, 1273, 1289
MfeI CAATTG 2 cut(s) 580, 851
MflI RGATCY 1 cut(s) 895
MhlI GDGCHC 2 cut(s) 13, 113
MluCI AATT 7 cut(s) 580, 851, 876, 939, 1052, 1152, 1330
MlyI GAGTC 1 cut(s) 300
MmeI TCCRAC 1 cut(s) 268
Mph1103I ATGCAT 1 cut(s) 62
MroXI GAANNNNTTC 3 cut(s) 575, 846, 939
MseI TTAA 3 cut(s) 164, 1155, 1247
MspA1I CMGCKG 3 cut(s) 235, 323, 1028
MspI CCGG 3 cut(s) 15, 506, 777
MspR9I CCNGG 1 cut(s) 15
MunI CAATTG 2 cut(s) 580, 851
Mva1269I GAATGC 1 cut(s) 1343
NciI CCSGG 1 cut(s) 15
NdeI CATATG 1 cut(s) 512
NdeII GATC 6 cut(s) 381, 519, 663, 790, 895, 967
NheI GCTAGC 1 cut(s) 266
NlaIII CATG 5 cut(s) 9, 388, 670, 787, 1092
NlaIV GGNNCC 4 cut(s) 11, 12, 489, 760
NotI GCGGCCGC 1 cut(s) 324
NsiI ATGCAT 1 cut(s) 62
NspI RCATGY 1 cut(s) 1092
PaeR7I CTCGAG 2 cut(s) 261, 992
PaqCI CACCTGC 1 cut(s) 872
PauI GCGCGC 2 cut(s) 401, 683
PceI AGGCCT 1 cut(s) 910
PciSI GCTCTTC 1 cut(s) 1140
PcsI WCGNNNNNNNCGW 3 cut(s) 294, 359, 641
PctI GAATGC 1 cut(s) 1343
PdmI GAANNNNTTC 3 cut(s) 575, 846, 939
PfeI GAWTC 3 cut(s) 303, 417, 699
PkrI GCNGC 9 cut(s) 133, 180, 325, 328, 460, 610, 742, 928, 961
PleI GAGTC 1 cut(s) 299
PmaCI CACGTG 1 cut(s) 197
PmlI CACGTG 1 cut(s) 197
PpsI GAGTC 1 cut(s) 299
Ppu21I YACGTR 1 cut(s) 197
Psp124BI GAGCTC 1 cut(s) 113
PspCI CACGTG 1 cut(s) 197
PspN4I GGNNCC 4 cut(s) 11, 12, 489, 760
PspOMI GGGCCC 1 cut(s) 9
PspPI GGNCC 2 cut(s) 9, 10
PspXI VCTCGAGB 1 cut(s) 261
PstI CTGCAG 2 cut(s) 399, 681
PsuI RGATCY 1 cut(s) 895
PteI GCGCGC 2 cut(s) 401, 683
RsaI GTAC 1 cut(s) 249
RsaNI GTAC 1 cut(s) 248
SacI GAGCTC 1 cut(s) 113
SacII CCGCGG 2 cut(s) 236, 1029
SapI GCTCTTC 1 cut(s) 1140
SaqAI TTAA 3 cut(s) 164, 1155, 1247
SatI GCNGC 9 cut(s) 132, 179, 324, 327, 459, 609, 741, 927, 960
Sau3AI GATC 6 cut(s) 381, 519, 663, 790, 895, 967
Sau96I GGNCC 2 cut(s) 9, 10
SchI GAGTC 1 cut(s) 300
ScrFI CCNGG 1 cut(s) 15
SduI GDGCHC 2 cut(s) 13, 113
SfaNI GCATC 3 cut(s) 69, 222, 1284
SfcI CTRYAG 3 cut(s) 395, 677, 891
Sfr274I CTCGAG 2 cut(s) 261, 992
Sfr303I CCGCGG 2 cut(s) 236, 1029
SgrBI CCGCGG 2 cut(s) 236, 1029
SlaI CTCGAG 2 cut(s) 261, 992
SmlI CTYRAG 4 cut(s) 261, 602, 912, 992
SmoI CTYRAG 4 cut(s) 261, 602, 912, 992
Sse9I AATT 7 cut(s) 580, 851, 876, 939, 1052, 1152, 1330
SseBI AGGCCT 1 cut(s) 910
SspMI CTAG 4 cut(s) 75, 140, 267, 429
SstI GAGCTC 1 cut(s) 113
StuI AGGCCT 1 cut(s) 910
StyD4I CCNGG 1 cut(s) 13
TaaI ACNGT 2 cut(s) 88, 892
TaiI ACGT 9 cut(s) 199, 221, 253, 365, 393, 498, 647, 675, 769
TaqI TCGA 4 cut(s) 113, 262, 993, 1107
TasI AATT 7 cut(s) 580, 851, 876, 939, 1052, 1152, 1330
TauI GCSGC 5 cut(s) 134, 181, 326, 329, 611
TfiI GAWTC 3 cut(s) 303, 417, 699
Tru1I TTAA 3 cut(s) 164, 1155, 1247
Tru9I TTAA 3 cut(s) 164, 1155, 1247
TscAI CASTG 5 cut(s) 93, 382, 506, 664, 777
TseI GCWGC 4 cut(s) 458, 740, 926, 959
TspGWI ACGGA 1 cut(s) 848
TspRI CASTG 5 cut(s) 93, 382, 506, 664, 777
XapI RAATTY 1 cut(s) 1052
XceI RCATGY 1 cut(s) 1092
XcmI CCANNNNNNNNNTGG 2 cut(s) 498, 769
XhoI CTCGAG 2 cut(s) 261, 992
XmnI GAANNNNTTC 3 cut(s) 575, 846, 939
XspI CTAG 4 cut(s) 75, 140, 267, 429
ZraI GACGTC 2 cut(s) 363, 645
Zsp2I ATGCAT 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.