Rmu_sc0001823.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001823.1
OG0000127
Physical Location & Seq
Reverse (-)
22596 .. 24630
2035 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001823.1_g000005.1.cds

Sequence Viewer

Length: 1065 bp
atgttgaaccattctaagagcaagttcacagggctagttcttgcccgggcaccacgtcaaaaggaggctgggggggaggatttccgaactgttcatccttccaccggatatggggcaagactacagggggaggccgagggcgccatctcgggcaccatggtgactgagccggtgacccaggctgccaggctggccgaagaaggagatcctagtattgacgggacacattggcagactattgaagacattcaattgtgcaagtcttggagggctgttagcaagatccggcaaaggctacgtcaagcacaagatttgtggagagctgcgatgaccaaatctaaaggaaaacaaaaaaaaggtgatttcattaatttagaatgttacgagattgttaaggggtttcaacaatttgaagacattccaaaccattcctcttcggctggaggaacctccaggggaggaactgaacggatgcacacacaacaatccgctcctgattctcatgtccagttggacatagatgcagatgaggtaaacgccgatgcaactcccaatccttcggtgaggcctcaagggaagaaggctgccaaagaagctcttcgaaaaggaaagaaagcatctaatgattccagtcctctgacagccgctgtggagactatagcaaccaaccaaacatcaatgatgtctgccaaggagaaacgtgatgaggaatatgctcgacatctccgtgaccaacaacaacgagattatatacgcttgcaaatggatatgcgaaacgaggcattcaaaattcaagagagggaagagcgtattatggagctcgacacaagtaagatgacgccaaccaaaaagaattactggcaaagaaaacaaaaaaaattgcagagaaagaagctgaagatgcaacccgtagatctaacatcccacaaccaccattccccggtgagtattatccacaatctcctttctccggtggctatccacaaccttctttccccggtggctatccacaacctcctttccccggtggctatccacaaccaccattccccggtgggtatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

354

Amino Acids

39.74

Weight (kDa)

9.52

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000127)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 49, 140, 152
AccBSI CCGCTC 1 cut(s) 491
AciI CCGC 2 cut(s) 489, 645
AclWI GGATC 2 cut(s) 200, 277
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 1 cut(s) 789
AcuI CTGAAG 1 cut(s) 917
AcyI GRCGYC 2 cut(s) 141, 839
AfiI CCNNNNNNNGG 6 cut(s) 104, 111, 940, 970, 1024, 1051
AgsI TTSAA 7 cut(s) 7, 242, 251, 404, 413, 787, 794
AjiI CACGTC 1 cut(s) 56
AjnI CCWGG 3 cut(s) 177, 185, 452
AleI CACNNNNGTG 1 cut(s) 158
AloI GAACNNNNNNTCC 2 cut(s) 79, 111
AluBI AGCT 4 cut(s) 323, 596, 820, 895
AluI AGCT 4 cut(s) 323, 596, 820, 895
Alw21I GWGCWC 1 cut(s) 822
Alw26I GTCTC 1 cut(s) 647
AlwI GGATC 2 cut(s) 200, 277
AlwNI CAGNNNCTG 1 cut(s) 647
Ama87I CYCGRG 2 cut(s) 45, 148
AoxI GGCC 3 cut(s) 132, 192, 566
ApeKI GCWGC 3 cut(s) 182, 323, 584
ApoI RAATTY 1 cut(s) 789
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 3 cut(s) 246, 417, 597
AspLEI GCGC 1 cut(s) 143
AsuC2I CCSGG 6 cut(s) 46, 47, 941, 998, 1025, 1052
AsuHPI GGTGA 5 cut(s) 172, 184, 371, 574, 955
AsuII TTCGAA 1 cut(s) 601
AvaI CYCGRG 2 cut(s) 45, 148
BaeGI GKGCMC 2 cut(s) 52, 155
BanI GGYRCC 3 cut(s) 49, 140, 152
BanII GRGCYC 1 cut(s) 822
BbsI GAAGAC 2 cut(s) 249, 420
Bbv12I GWGCWC 1 cut(s) 822
BbvI GCAGC 3 cut(s) 169, 310, 571
BccI CCATC 1 cut(s) 152
BciT130I CCWGG 3 cut(s) 179, 187, 454
BcnI CCSGG 6 cut(s) 46, 47, 941, 998, 1025, 1052
BcoDI GTCTC 1 cut(s) 647
BfaI CTAG 2 cut(s) 35, 210
BfmI CTRYAG 2 cut(s) 122, 657
BfoI RGCGCY 1 cut(s) 144
BglI GCCNNNNNGGC 1 cut(s) 191
BglII AGATCT 1 cut(s) 913
BisI GCNGC 4 cut(s) 183, 324, 585, 645
BlsI GCNGC 4 cut(s) 184, 325, 586, 646
Bme1390I CCNGG 9 cut(s) 46, 47, 179, 187, 454, 941, 998, 1025, 1052
BmeT110I CYCGRG 2 cut(s) 45, 148
BmgBI CACGTC 1 cut(s) 56
BmiI GGNNCC 4 cut(s) 51, 142, 154, 448
BmrFI CCNGG 9 cut(s) 46, 47, 179, 187, 454, 941, 998, 1025, 1052
BmsI GCATC 5 cut(s) 462, 511, 532, 626, 891
BpiI GAAGAC 2 cut(s) 249, 420
BpmI CTGGAG 2 cut(s) 436, 462
Bpu14I TTCGAA 1 cut(s) 601
BpuEI CTTGAG 1 cut(s) 555
BpuMI CCSGG 6 cut(s) 46, 47, 941, 998, 1025, 1052
BsaHI GRCGYC 2 cut(s) 141, 839
BsaWI WCCGGW 2 cut(s) 104, 970
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 111, 940, 970, 1024, 1051
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 508, 630, 863
BseBI CCWGG 3 cut(s) 179, 187, 454
BseGI GGATG 3 cut(s) 94, 477, 920
BseLI CCNNNNNNNGG 6 cut(s) 104, 111, 940, 970, 1024, 1051
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 3 cut(s) 508, 630, 863
BseSI GKGCMC 2 cut(s) 52, 155
BseXI GCAGC 3 cut(s) 169, 310, 571
BseYI CCCAGC 1 cut(s) 68
BshFI GGCC 3 cut(s) 134, 194, 568
BshNI GGYRCC 3 cut(s) 49, 140, 152
BsiHKAI GWGCWC 1 cut(s) 822
BsiHKCI CYCGRG 2 cut(s) 45, 148
BsiSI CCGG 9 cut(s) 46, 105, 170, 286, 941, 971, 998, 1025, 1052
BslFI GGGAC 1 cut(s) 235
BslI CCNNNNNNNGG 6 cut(s) 104, 111, 940, 970, 1024, 1051
BsmAI GTCTC 1 cut(s) 647
BsmFI GGGAC 1 cut(s) 235
BsmI GAATGC 1 cut(s) 782
BsnI GGCC 3 cut(s) 134, 194, 568
BsoBI CYCGRG 2 cut(s) 45, 148
Bsp119I TTCGAA 1 cut(s) 601
Bsp1286I GDGCHC 3 cut(s) 52, 155, 822
Bsp143I GATC 3 cut(s) 205, 282, 913
Bsp19I CCATGG 1 cut(s) 156
BspACI CCGC 2 cut(s) 489, 645
BspANI GGCC 3 cut(s) 134, 194, 568
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 4 cut(s) 51, 142, 154, 448
BspPI GGATC 2 cut(s) 200, 277
BspQI GCTCTTC 2 cut(s) 603, 798
BspT104I TTCGAA 1 cut(s) 601
BspT107I GGYRCC 3 cut(s) 49, 140, 152
BsrBI CCGCTC 1 cut(s) 491
BsrFI RCCGGY 1 cut(s) 169
BsrI ACTGG 3 cut(s) 508, 630, 863
BssAI RCCGGY 1 cut(s) 169
BssMI GATC 3 cut(s) 205, 282, 913
BssNI GRCGYC 2 cut(s) 141, 839
BssT1I CCWWGG 2 cut(s) 156, 690
Bst2UI CCWGG 3 cut(s) 179, 187, 454
Bst4CI ACNGT 1 cut(s) 91
Bst6I CTCTTC 3 cut(s) 439, 603, 798
BstACI GRCGYC 2 cut(s) 141, 839
BstBI TTCGAA 1 cut(s) 601
BstC8I GCNNGC 2 cut(s) 192, 758
BstDEI CTNAG 2 cut(s) 15, 165
BstDSI CCRYGG 1 cut(s) 156
BstEII GGTNACC 1 cut(s) 172
BstF5I GGATG 3 cut(s) 94, 477, 920
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 1 cut(s) 143
BstKTI GATC 3 cut(s) 208, 285, 916
BstMAI GTCTC 1 cut(s) 647
BstMBI GATC 3 cut(s) 205, 282, 913
BstMWI GCNNNNNNNGC 4 cut(s) 140, 191, 593, 901
BstNI CCWGG 3 cut(s) 179, 187, 454
BstPI GGTNACC 1 cut(s) 172
BstSCI CCNGG 9 cut(s) 44, 45, 177, 185, 452, 939, 996, 1023, 1050
BstSFI CTRYAG 2 cut(s) 122, 657
BstSLI GKGCMC 2 cut(s) 52, 155
BstV1I GCAGC 3 cut(s) 169, 310, 571
BstV2I GAAGAC 2 cut(s) 249, 420
BstX2I RGATCY 3 cut(s) 205, 282, 913
BstYI RGATCY 3 cut(s) 205, 282, 913
BsuRI GGCC 3 cut(s) 134, 194, 568
BtgI CCRYGG 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 341
BtrI CACGTC 1 cut(s) 56
BtsCI GGATG 3 cut(s) 94, 477, 920
Cac8I GCNNGC 2 cut(s) 192, 758
CaiI CAGNNNCTG 1 cut(s) 647
CfoI GCGC 1 cut(s) 143
Cfr10I RCCGGY 1 cut(s) 169
Cfr9I CCCGGG 1 cut(s) 45
CseI GACGC 1 cut(s) 847
CspCI CAANNNNNGTGG 2 cut(s) 296, 331
CviAII CATG 2 cut(s) 157, 503
DdeI CTNAG 2 cut(s) 15, 165
DinI GGCGCC 1 cut(s) 142
DpnI GATC 3 cut(s) 207, 284, 915
DpnII GATC 3 cut(s) 205, 282, 913
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 3 cut(s) 439, 603, 798
EarI CTCTTC 3 cut(s) 439, 603, 798
Ecl136II GAGCTC 1 cut(s) 820
Eco130I CCWWGG 2 cut(s) 156, 690
Eco147I AGGCCT 1 cut(s) 568
Eco24I GRGCYC 1 cut(s) 822
Eco53kI GAGCTC 1 cut(s) 820
Eco57I CTGAAG 1 cut(s) 917
Eco88I CYCGRG 2 cut(s) 45, 148
Eco91I GGTNACC 1 cut(s) 172
EcoICRI GAGCTC 1 cut(s) 820
EcoO65I GGTNACC 1 cut(s) 172
EcoRII CCWGG 3 cut(s) 177, 185, 452
EcoT14I CCWWGG 2 cut(s) 156, 690
EcoT38I GRGCYC 1 cut(s) 822
EgeI GGCGCC 1 cut(s) 142
EheI GGCGCC 1 cut(s) 142
ErhI CCWWGG 2 cut(s) 156, 690
FaeI CATG 2 cut(s) 160, 506
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 1 cut(s) 235
FatI CATG 2 cut(s) 156, 502
Fnu4HI GCNGC 4 cut(s) 183, 324, 585, 645
FokI GGATG 3 cut(s) 81, 484, 907
FriOI GRGCYC 1 cut(s) 822
Fsp4HI GCNGC 4 cut(s) 183, 324, 585, 645
FspBI CTAG 2 cut(s) 35, 210
GlaI GCGC 1 cut(s) 142
GluI GCNGC 4 cut(s) 183, 324, 585, 645
GsaI CCCAGC 1 cut(s) 72
GsuI CTGGAG 2 cut(s) 436, 462
HaeII RGCGCY 1 cut(s) 144
HaeIII GGCC 3 cut(s) 134, 194, 568
HapII CCGG 9 cut(s) 46, 105, 170, 286, 941, 971, 998, 1025, 1052
HgaI GACGC 1 cut(s) 847
HhaI GCGC 1 cut(s) 143
Hin1I GRCGYC 2 cut(s) 141, 839
Hin1II CATG 2 cut(s) 160, 506
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HinfI GANTC 2 cut(s) 497, 626
HpaII CCGG 9 cut(s) 46, 105, 170, 286, 941, 971, 998, 1025, 1052
HphI GGTGA 5 cut(s) 172, 184, 371, 574, 955
Hpy166II GTNNAC 2 cut(s) 27, 535
Hpy188I TCNGA 2 cut(s) 86, 639
Hpy188III TCNNGA 2 cut(s) 494, 794
Hpy8I GTNNAC 2 cut(s) 27, 535
HpyAV CCTTC 5 cut(s) 108, 194, 567, 574, 998
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4IV ACGT 3 cut(s) 55, 298, 700
HpyCH4V TGCA 7 cut(s) 258, 475, 524, 545, 760, 883, 904
HpyF10VI GCNNNNNNNGC 4 cut(s) 140, 191, 593, 901
HpyF3I CTNAG 2 cut(s) 15, 165
HpySE526I ACGT 3 cut(s) 55, 298, 700
Hsp92I GRCGYC 2 cut(s) 141, 839
Hsp92II CATG 2 cut(s) 160, 506
HspAI GCGC 1 cut(s) 141
KasI GGCGCC 1 cut(s) 140
Kzo9I GATC 3 cut(s) 205, 282, 913
LguI GCTCTTC 2 cut(s) 603, 798
LmnI GCTCC 2 cut(s) 496, 817
Lsp1109I GCAGC 3 cut(s) 169, 310, 571
LweI GCATC 5 cut(s) 462, 511, 532, 626, 891
MaeI CTAG 2 cut(s) 35, 210
MaeII ACGT 3 cut(s) 55, 298, 700
MaeIII GTNAC 4 cut(s) 160, 172, 380, 728
MalI GATC 3 cut(s) 207, 284, 915
MbiI CCGCTC 1 cut(s) 491
MboI GATC 3 cut(s) 205, 282, 913
MboII GAAGA 8 cut(s) 209, 254, 425, 426, 589, 590, 815, 910
MfeI CAATTG 1 cut(s) 251
MflI RGATCY 3 cut(s) 205, 282, 913
MhlI GDGCHC 3 cut(s) 52, 155, 822
MluCI AATT 6 cut(s) 251, 370, 407, 789, 853, 878
Mly113I GGCGCC 1 cut(s) 141
MmeI TCCRAC 1 cut(s) 492
MroXI GAANNNNTTC 3 cut(s) 246, 417, 597
MseI TTAA 2 cut(s) 369, 393
MslI CAYNNNNRTG 2 cut(s) 158, 726
MspA1I CMGCKG 1 cut(s) 647
MspI CCGG 9 cut(s) 46, 105, 170, 286, 941, 971, 998, 1025, 1052
MspR9I CCNGG 9 cut(s) 46, 47, 179, 187, 454, 941, 998, 1025, 1052
MunI CAATTG 1 cut(s) 251
Mva1269I GAATGC 1 cut(s) 782
MvaI CCWGG 3 cut(s) 179, 187, 454
MwoI GCNNNNNNNGC 4 cut(s) 140, 191, 593, 901
NarI GGCGCC 1 cut(s) 141
NciI CCSGG 6 cut(s) 46, 47, 941, 998, 1025, 1052
NcoI CCATGG 1 cut(s) 156
NdeII GATC 3 cut(s) 205, 282, 913
NlaIII CATG 2 cut(s) 160, 506
NlaIV GGNNCC 4 cut(s) 51, 142, 154, 448
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 3 cut(s) 160, 172, 728
NspV TTCGAA 1 cut(s) 601
OliI CACNNNNGTG 1 cut(s) 158
PceI AGGCCT 1 cut(s) 568
PciSI GCTCTTC 2 cut(s) 603, 798
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 1 cut(s) 782
PdmI GAANNNNTTC 3 cut(s) 246, 417, 597
PfeI GAWTC 2 cut(s) 497, 626
PkrI GCNGC 4 cut(s) 184, 325, 586, 646
PluTI GGCGCC 1 cut(s) 144
PshBI ATTAAT 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 822
Psp6I CCWGG 3 cut(s) 177, 185, 452
PspEI GGTNACC 1 cut(s) 172
PspFI CCCAGC 1 cut(s) 68
PspGI CCWGG 3 cut(s) 177, 185, 452
PspN4I GGNNCC 4 cut(s) 51, 142, 154, 448
PstNI CAGNNNCTG 1 cut(s) 647
PsuI RGATCY 3 cut(s) 205, 282, 913
RseI CAYNNNNRTG 2 cut(s) 158, 726
SacI GAGCTC 1 cut(s) 822
SapI GCTCTTC 2 cut(s) 603, 798
SaqAI TTAA 2 cut(s) 369, 393
SatI GCNGC 4 cut(s) 183, 324, 585, 645
Sau3AI GATC 3 cut(s) 205, 282, 913
ScrFI CCNGG 9 cut(s) 46, 47, 179, 187, 454, 941, 998, 1025, 1052
SduI GDGCHC 3 cut(s) 52, 155, 822
SfaNI GCATC 5 cut(s) 462, 511, 532, 626, 891
SfcI CTRYAG 2 cut(s) 122, 657
SfoI GGCGCC 1 cut(s) 142
SfuI TTCGAA 1 cut(s) 601
SmaI CCCGGG 1 cut(s) 47
SmiMI CAYNNNNRTG 2 cut(s) 158, 726
SmlI CTYRAG 1 cut(s) 570
SmoI CTYRAG 1 cut(s) 570
SrfI GCCCGGGC 1 cut(s) 47
Sse9I AATT 6 cut(s) 251, 370, 407, 789, 853, 878
SseBI AGGCCT 1 cut(s) 568
SsiI CCGC 2 cut(s) 489, 645
SspDI GGCGCC 1 cut(s) 140
SspMI CTAG 2 cut(s) 35, 210
SstI GAGCTC 1 cut(s) 822
StuI AGGCCT 1 cut(s) 568
StyD4I CCNGG 9 cut(s) 44, 45, 177, 185, 452, 939, 996, 1023, 1050
StyI CCWWGG 2 cut(s) 156, 690
TaaI ACNGT 1 cut(s) 91
TaiI ACGT 3 cut(s) 58, 301, 703
TaqI TCGA 3 cut(s) 601, 718, 822
TasI AATT 6 cut(s) 251, 370, 407, 789, 853, 878
TauI GCSGC 1 cut(s) 647
TfiI GAWTC 2 cut(s) 497, 626
Tru1I TTAA 2 cut(s) 369, 393
Tru9I TTAA 2 cut(s) 369, 393
TseFI GTSAC 3 cut(s) 160, 172, 728
TseI GCWGC 3 cut(s) 182, 323, 584
Tsp45I GTSAC 3 cut(s) 160, 172, 728
TspDTI ATGAA 2 cut(s) 83, 355
TspGWI ACGGA 2 cut(s) 484, 716
TspMI CCCGGG 1 cut(s) 45
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 1 cut(s) 789
XmaI CCCGGG 1 cut(s) 45
XmnI GAANNNNTTC 3 cut(s) 246, 417, 597
XspI CTAG 2 cut(s) 35, 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.