Rorug04G0096700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000127
Physical Location & Seq
Reverse (-)
15182431 .. 15185128
2698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0096700.1

Sequence Viewer

Length: 1287 bp
ATGAGTCGCATCCGTCAGTCTCAGCTTGTCAAAAGCTTCAGCAGCAGCAGCAGAAGCTACCTGAACAAAGGCCCAATGAACTCGTCGTCCTCAGCTGCAAACTGGAACCACTCTTTCCTCTATCTCATCTTCATCTACGCTCTTCTCTACTTCCTCCACACCCAAATCGTTTATAGATTTCTCATAGGCCATGCACCCGTAACCATCAAGAAGACCAGCCCAAATCTCCCTCTTCGCTTCCGCTCCGATGGGACCTTCAAGATTCTCCAGGTGGCTGATATGCATTATGGGAATGGAGGGTTGACTCGGTGTCGAGACGTATTGGACTCCCAGTTTGCGGGATGTTCTGATCGGAACACGTCGCTGTTCCTCAAGAGGATGATTGAAGCTGAAAAGCCTGATTTCATTGCTTTTACAGGTGATAATATATTTGGGCCAAGCTCTACCGACGCTGCTGAATCAATGATTCGAGCATTTGGTCCTGCCATTAAATCAGGCATTCCGTGGGCAGCAGTTTTGGGAAACCACGACCAAGAATCTACAATGAATCGTGCAGAACTCATGTCCTTTATCTCCCTTATGGACTATTCACTTTCACAAGTTAATCCATTAGCTGAAGATCCCTTAGGAGAATGGATGCAAGACATTGATGGTTTTGGCAATTATAATCTGAGAGTATATGGTGCCCCAGGTTCCTACTTGGCAAATAGCAGCATCCTCAACCTTTTCTTTCTTGACAGTGGAGACAGAGAGACTGTTCATGGAGTACGAACTTACGGTTGGATTAAGGAATCACAACTCCGTTGGCTTCGTGGTGTTTCTCAGGGCCACAGTCGAGATCCAGATCACTCAGACAATGCTTTTTCTCCAGATAAACCACCGGCGCTTGCTTTTTTCCATATCCCAATTCCTGAGATCCGGCAGCTGTGGAATAGAGACATTGTTGGCAAGTTTCAGGAGGCTGTGGCATGTTCATCAGTGAACCCGGGAGTTTTGCATACCCTTGTATCCATGGGAGACGTGAAAGCTGTGTTCATTGGACATGATCATACCAATGACTTCTGTGGGAATCTTGATGGTGTTTGGTTCTGTTATGGTGGGGGCTTTGGATATCATGGTTATGGAAAGAGGGGGTGGCCAAGAAGAGCTAGGGTCATATTGGCAGAACTCGGGAAAGGGGAGAAAGGCTGGATGGGAGTTGAGAGGATTAGGACATGGAAGCATCTTGATGATGAGAAACTGAGCAAGATTGATGAGCAGTTCTTGTGGGAATACCATCCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

428

Amino Acids

48.19

Weight (kDa)

7.26

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 86 - 351 1.7e-15 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000127)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AccB1I GGYRCC 1 cut(s) 683
AccBSI CCGCTC 1 cut(s) 243
AciI CCGC 2 cut(s) 241, 338
AclWI GGATC 3 cut(s) 614, 833, 910
AcoI YGGCCR 1 cut(s) 1136
AcuI CTGAAG 2 cut(s) 22, 636
AfaI GTAC 1 cut(s) 768
AfiI CCNNNNNNNGG 1 cut(s) 337
AflIII ACRYGT 1 cut(s) 357
AgsI TTSAA 2 cut(s) 259, 386
AhdI GACNNNNNGTC 1 cut(s) 309
AjiI CACGTC 2 cut(s) 360, 1021
AjnI CCWGG 2 cut(s) 267, 688
AjuI GAANNNNNNNTTGG 2 cut(s) 763, 795
AloI GAACNNNNNNTCC 2 cut(s) 71, 103
Alw26I GTCTC 6 cut(s) 24, 309, 738, 746, 930, 1011
AlwI GGATC 3 cut(s) 614, 833, 910
Ama87I CYCGRG 2 cut(s) 985, 1169
AoxI GGCC 5 cut(s) 70, 187, 434, 826, 1136
ApeKI GCWGC 8 cut(s) 42, 45, 48, 95, 452, 509, 711, 922
ArsI GACNNNNNNTTYG 2 cut(s) 317, 349
AspLEI GCGC 1 cut(s) 886
AspS9I GGNCC 5 cut(s) 71, 252, 434, 479, 826
AsuC2I CCSGG 2 cut(s) 986, 987
AsuHPI GGTGA 1 cut(s) 431
AvaI CYCGRG 2 cut(s) 985, 1169
AvaII GGWCC 2 cut(s) 252, 479
AxyI CCTNAGG 1 cut(s) 625
BaeGI GKGCMC 1 cut(s) 688
BaeI ACNNNNGTAYC 2 cut(s) 990, 1023
BalI TGGCCA 1 cut(s) 1138
BanI GGYRCC 1 cut(s) 683
BbsI GAAGAC 1 cut(s) 218
BbvCI CCTCAGC 1 cut(s) 91
BbvI GCAGC 8 cut(s) 54, 57, 60, 82, 439, 521, 723, 934
BccI CCATC 6 cut(s) 212, 242, 644, 1070, 1186, 1284
BciT130I CCWGG 2 cut(s) 269, 690
BciVI GTATCC 1 cut(s) 1018
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 986, 987
BcoDI GTCTC 6 cut(s) 24, 309, 738, 746, 930, 1011
BfaI CTAG 1 cut(s) 1149
BfoI RGCGCY 1 cut(s) 887
BfuI GTATCC 1 cut(s) 1018
BisI GCNGC 8 cut(s) 43, 46, 49, 96, 453, 510, 712, 923
BlsI GCNGC 8 cut(s) 44, 47, 50, 97, 454, 511, 713, 924
Bme1390I CCNGG 4 cut(s) 269, 690, 986, 987
Bme18I GGWCC 2 cut(s) 252, 479
BmeRI GACNNNNNGTC 1 cut(s) 309
BmeT110I CYCGRG 2 cut(s) 985, 1169
BmgBI CACGTC 2 cut(s) 360, 1021
BmgT120I GGNCC 5 cut(s) 71, 252, 434, 479, 826
BmiI GGNNCC 4 cut(s) 107, 253, 685, 694
BmrFI CCNGG 4 cut(s) 269, 690, 986, 987
BmrI ACTGGG 1 cut(s) 325
BmsI GCATC 4 cut(s) 18, 627, 723, 1231
BmuI ACTGGG 1 cut(s) 325
BpiI GAAGAC 1 cut(s) 218
BpmI CTGGAG 2 cut(s) 251, 852
Bpu10I CCTNAGC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 356
BpuMI CCSGG 2 cut(s) 986, 987
BsaBI GATNNNNATC 1 cut(s) 843
BsaJI CCNNGG 4 cut(s) 503, 688, 985, 1011
Bsc4I CCNNNNNNNGG 1 cut(s) 337
Bse118I RCCGGY 1 cut(s) 880
Bse1I ACTGG 2 cut(s) 107, 331
Bse21I CCTNAGG 1 cut(s) 625
Bse3DI GCAATG 1 cut(s) 405
Bse8I GATNNNNATC 1 cut(s) 843
BseBI CCWGG 2 cut(s) 269, 690
BseDI CCNNGG 4 cut(s) 503, 688, 985, 1011
BseGI GGATG 7 cut(s) 9, 347, 384, 642, 714, 1197, 1276
BseJI GATNNNNATC 1 cut(s) 843
BseLI CCNNNNNNNGG 1 cut(s) 337
BseMI GCAATG 1 cut(s) 405
BseMII CTCAG 7 cut(s) 35, 105, 662, 836, 864, 903, 1232
BseNI ACTGG 2 cut(s) 107, 331
BseSI GKGCMC 1 cut(s) 688
BseXI GCAGC 8 cut(s) 54, 57, 60, 82, 439, 521, 723, 934
BsgI GTGCAG 1 cut(s) 573
BshFI GGCC 5 cut(s) 72, 189, 436, 828, 1138
BshNI GGYRCC 1 cut(s) 683
BsiHKCI CYCGRG 2 cut(s) 985, 1169
BsiSI CCGG 3 cut(s) 881, 919, 986
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 1 cut(s) 337
BsmAI GTCTC 6 cut(s) 24, 309, 738, 746, 930, 1011
BsmBI CGTCTC 2 cut(s) 309, 1011
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 1 cut(s) 498
BsnI GGCC 5 cut(s) 72, 189, 436, 828, 1138
BsoBI CYCGRG 2 cut(s) 985, 1169
Bsp1286I GDGCHC 1 cut(s) 688
Bsp143I GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
Bsp19I CCATGG 1 cut(s) 1011
BspACI CCGC 2 cut(s) 241, 338
BspANI GGCC 5 cut(s) 72, 189, 436, 828, 1138
BspCNI CTCAG 7 cut(s) 34, 104, 663, 835, 863, 904, 1233
BspHI TCATGA 1 cut(s) 1283
BspLI GGNNCC 4 cut(s) 107, 253, 685, 694
BspPI GGATC 3 cut(s) 614, 833, 910
BspQI GCTCTTC 2 cut(s) 147, 1138
BspT107I GGYRCC 1 cut(s) 683
BsrBI CCGCTC 1 cut(s) 243
BsrDI GCAATG 1 cut(s) 405
BsrFI RCCGGY 1 cut(s) 880
BsrI ACTGG 2 cut(s) 107, 331
BssAI RCCGGY 1 cut(s) 880
BssECI CCNNGG 4 cut(s) 503, 688, 985, 1011
BssMI GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
BssT1I CCWWGG 1 cut(s) 1011
Bst2UI CCWGG 2 cut(s) 269, 690
Bst4CI ACNGT 4 cut(s) 740, 757, 779, 833
Bst6I CTCTTC 3 cut(s) 147, 237, 1138
BstC8I GCNNGC 1 cut(s) 888
BstDEI CTNAG 8 cut(s) 21, 91, 625, 671, 822, 850, 912, 1241
BstDSI CCRYGG 2 cut(s) 503, 1011
BstF5I GGATG 7 cut(s) 9, 347, 384, 642, 714, 1197, 1276
BstH2I RGCGCY 1 cut(s) 887
BstHHI GCGC 1 cut(s) 886
BstKTI GATC 6 cut(s) 352, 622, 841, 847, 918, 1048
BstMAI GTCTC 6 cut(s) 24, 309, 738, 746, 930, 1011
BstMBI GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
BstMWI GCNNNNNNNGC 3 cut(s) 42, 48, 54
BstNI CCWGG 2 cut(s) 269, 690
BstNSI RCATGY 1 cut(s) 972
BstSCI CCNGG 4 cut(s) 267, 688, 984, 985
BstSLI GKGCMC 1 cut(s) 688
BstV1I GCAGC 8 cut(s) 54, 57, 60, 82, 439, 521, 723, 934
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 3 cut(s) 619, 838, 915
BstYI RGATCY 3 cut(s) 619, 838, 915
Bsu36I CCTNAGG 1 cut(s) 625
BsuI GTATCC 1 cut(s) 1018
BsuRI GGCC 5 cut(s) 72, 189, 436, 828, 1138
BtgI CCRYGG 2 cut(s) 503, 1011
BtrI CACGTC 2 cut(s) 360, 1021
BtsCI GGATG 7 cut(s) 9, 347, 384, 642, 714, 1197, 1276
BtsIMutI CAGTG 2 cut(s) 745, 984
Cac8I GCNNGC 1 cut(s) 888
CciI TCATGA 1 cut(s) 1283
CfoI GCGC 1 cut(s) 886
Cfr10I RCCGGY 1 cut(s) 880
Cfr13I GGNCC 5 cut(s) 71, 252, 434, 479, 826
Cfr9I CCCGGG 1 cut(s) 985
CseI GACGC 1 cut(s) 458
Csp6I GTAC 1 cut(s) 767
CviAII CATG 9 cut(s) 191, 562, 761, 969, 1012, 1043, 1115, 1215, 1284
CviQI GTAC 1 cut(s) 767
DdeI CTNAG 8 cut(s) 21, 91, 625, 671, 822, 850, 912, 1241
DpnI GATC 6 cut(s) 351, 621, 840, 846, 917, 1047
DpnII GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
DriI GACNNNNNGTC 1 cut(s) 309
EaeI YGGCCR 1 cut(s) 1136
Eam1104I CTCTTC 3 cut(s) 147, 237, 1138
Eam1105I GACNNNNNGTC 1 cut(s) 309
EarI CTCTTC 3 cut(s) 147, 237, 1138
Eco130I CCWWGG 1 cut(s) 1011
Eco32I GATATC 1 cut(s) 1112
Eco47I GGWCC 2 cut(s) 252, 479
Eco57I CTGAAG 2 cut(s) 22, 636
Eco81I CCTNAGG 1 cut(s) 625
Eco88I CYCGRG 2 cut(s) 985, 1169
EcoO109I RGGNCCY 1 cut(s) 252
EcoRII CCWGG 2 cut(s) 267, 688
EcoRV GATATC 1 cut(s) 1112
EcoT14I CCWWGG 1 cut(s) 1011
EcoT22I ATGCAT 1 cut(s) 285
ErhI CCWWGG 1 cut(s) 1011
Esp3I CGTCTC 2 cut(s) 309, 1011
FaeI CATG 9 cut(s) 194, 565, 764, 972, 1015, 1046, 1118, 1218, 1287
FaqI GGGAC 1 cut(s) 265
FatI CATG 9 cut(s) 190, 561, 760, 968, 1011, 1042, 1114, 1214, 1283
FauI CCCGC 1 cut(s) 331
FbaI TGATCA 1 cut(s) 1045
Fnu4HI GCNGC 8 cut(s) 43, 46, 49, 96, 453, 510, 712, 923
FokI GGATG 6 cut(s) 354, 391, 649, 701, 1204, 1263
Fsp4HI GCNGC 8 cut(s) 43, 46, 49, 96, 453, 510, 712, 923
FspBI CTAG 1 cut(s) 1149
GlaI GCGC 1 cut(s) 885
GluI GCNGC 8 cut(s) 43, 46, 49, 96, 453, 510, 712, 923
GsuI CTGGAG 2 cut(s) 251, 852
HaeII RGCGCY 1 cut(s) 887
HaeIII GGCC 5 cut(s) 72, 189, 436, 828, 1138
HapII CCGG 3 cut(s) 881, 919, 986
HgaI GACGC 1 cut(s) 458
HhaI GCGC 1 cut(s) 886
Hin1II CATG 9 cut(s) 194, 565, 764, 972, 1015, 1046, 1118, 1218, 1287
Hin6I GCGC 1 cut(s) 884
HinP1I GCGC 1 cut(s) 884
HincII GTYRAC 1 cut(s) 303
HindII GTYRAC 1 cut(s) 303
HindIII AAGCTT 1 cut(s) 34
HpaII CCGG 3 cut(s) 881, 919, 986
HphI GGTGA 1 cut(s) 431
Hpy166II GTNNAC 2 cut(s) 303, 982
Hpy188I TCNGA 5 cut(s) 247, 349, 354, 672, 853
Hpy8I GTNNAC 2 cut(s) 303, 982
Hpy99I CGWCG 3 cut(s) 88, 364, 452
HpyAV CCTTC 1 cut(s) 265
HpyCH4III ACNGT 4 cut(s) 740, 757, 779, 833
HpyCH4IV ACGT 3 cut(s) 318, 359, 1020
HpyCH4V TGCA 6 cut(s) 98, 194, 283, 554, 640, 997
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 48, 54
HpyF3I CTNAG 8 cut(s) 21, 91, 625, 671, 822, 850, 912, 1241
HpySE526I ACGT 3 cut(s) 318, 359, 1020
Hsp92II CATG 9 cut(s) 194, 565, 764, 972, 1015, 1046, 1118, 1218, 1287
HspAI GCGC 1 cut(s) 884
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
LguI GCTCTTC 2 cut(s) 147, 1138
LmnI GCTCC 1 cut(s) 248
Lsp1109I GCAGC 8 cut(s) 54, 57, 60, 82, 439, 521, 723, 934
LweI GCATC 4 cut(s) 18, 627, 723, 1231
MaeI CTAG 1 cut(s) 1149
MaeII ACGT 3 cut(s) 318, 359, 1020
MaeIII GTNAC 1 cut(s) 199
MalI GATC 6 cut(s) 351, 621, 840, 846, 917, 1047
MbiI CCGCTC 1 cut(s) 243
MboI GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
MboII GAAGA 6 cut(s) 121, 134, 223, 224, 629, 1155
MflI RGATCY 3 cut(s) 619, 838, 915
MhlI GDGCHC 1 cut(s) 688
MlsI TGGCCA 1 cut(s) 1138
MluCI AATT 2 cut(s) 661, 906
MluNI TGGCCA 1 cut(s) 1138
MlyI GAGTC 3 cut(s) 13, 298, 320
MmeI TCCRAC 1 cut(s) 761
Mox20I TGGCCA 1 cut(s) 1138
Mph1103I ATGCAT 1 cut(s) 285
MscI TGGCCA 1 cut(s) 1138
MseI TTAA 3 cut(s) 489, 603, 786
MslI CAYNNNNRTG 3 cut(s) 1053, 1119, 1227
Msp20I TGGCCA 1 cut(s) 1138
MspA1I CMGCKG 2 cut(s) 95, 925
MspI CCGG 3 cut(s) 881, 919, 986
MspR9I CCNGG 4 cut(s) 269, 690, 986, 987
Mva1269I GAATGC 1 cut(s) 498
MvaI CCWGG 2 cut(s) 269, 690
MwoI GCNNNNNNNGC 3 cut(s) 42, 48, 54
NciI CCSGG 2 cut(s) 986, 987
NcoI CCATGG 1 cut(s) 1011
NdeII GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
NlaIII CATG 9 cut(s) 194, 565, 764, 972, 1015, 1046, 1118, 1218, 1287
NlaIV GGNNCC 4 cut(s) 107, 253, 685, 694
NsiI ATGCAT 1 cut(s) 285
NspI RCATGY 1 cut(s) 972
PagI TCATGA 1 cut(s) 1283
PciSI GCTCTTC 2 cut(s) 147, 1138
PctI GAATGC 1 cut(s) 498
PfeI GAWTC 7 cut(s) 262, 458, 466, 536, 547, 791, 1069
PkrI GCNGC 8 cut(s) 44, 47, 50, 97, 454, 511, 713, 924
PleI GAGTC 3 cut(s) 12, 298, 320
PpsI GAGTC 3 cut(s) 12, 298, 320
PpuMI RGGWCCY 1 cut(s) 252
PsiI TTATAA 1 cut(s) 666
Psp5II RGGWCCY 1 cut(s) 252
Psp6I CCWGG 2 cut(s) 267, 688
PspGI CCWGG 2 cut(s) 267, 688
PspN4I GGNNCC 4 cut(s) 107, 253, 685, 694
PspPI GGNCC 5 cut(s) 71, 252, 434, 479, 826
PspPPI RGGWCCY 1 cut(s) 252
PsuI RGATCY 3 cut(s) 619, 838, 915
PvuII CAGCTG 2 cut(s) 95, 925
RsaI GTAC 1 cut(s) 768
RsaNI GTAC 1 cut(s) 767
RseI CAYNNNNRTG 3 cut(s) 1053, 1119, 1227
SapI GCTCTTC 2 cut(s) 147, 1138
SaqAI TTAA 3 cut(s) 489, 603, 786
SatI GCNGC 8 cut(s) 43, 46, 49, 96, 453, 510, 712, 923
Sau3AI GATC 6 cut(s) 349, 619, 838, 844, 915, 1045
Sau96I GGNCC 5 cut(s) 71, 252, 434, 479, 826
SchI GAGTC 3 cut(s) 13, 298, 320
ScrFI CCNGG 4 cut(s) 269, 690, 986, 987
SduI GDGCHC 1 cut(s) 688
SfaNI GCATC 4 cut(s) 18, 627, 723, 1231
SgrAI CRCCGGYG 1 cut(s) 880
SinI GGWCC 2 cut(s) 252, 479
SmaI CCCGGG 1 cut(s) 987
SmiMI CAYNNNNRTG 3 cut(s) 1053, 1119, 1227
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 2 cut(s) 661, 906
SsiI CCGC 2 cut(s) 241, 338
SspMI CTAG 1 cut(s) 1149
StyD4I CCNGG 4 cut(s) 267, 688, 984, 985
StyI CCWWGG 1 cut(s) 1011
TaaI ACNGT 4 cut(s) 740, 757, 779, 833
TaiI ACGT 3 cut(s) 321, 362, 1023
TaqI TCGA 3 cut(s) 313, 469, 835
TasI AATT 2 cut(s) 661, 906
TfiI GAWTC 7 cut(s) 262, 458, 466, 536, 547, 791, 1069
Tru1I TTAA 3 cut(s) 489, 603, 786
Tru9I TTAA 3 cut(s) 489, 603, 786
TscAI CASTG 2 cut(s) 745, 984
TseI GCWGC 8 cut(s) 42, 45, 48, 95, 452, 509, 711, 922
TspDTI ATGAA 7 cut(s) 92, 121, 394, 560, 749, 963, 1024
TspGWI ACGGA 2 cut(s) 492, 791
TspMI CCCGGG 1 cut(s) 985
TspRI CASTG 2 cut(s) 745, 984
VpaK11BI GGWCC 2 cut(s) 252, 479
XceI RCATGY 1 cut(s) 972
XmaI CCCGGG 1 cut(s) 985
XspI CTAG 1 cut(s) 1149
Zsp2I ATGCAT 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.