Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009414.1

Orthogroup ID

OG0000127

Physical Location & Seq

Genomic Coordinates Forward (+)

8181 .. 13432

Gene Structure 5252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009414.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1158 bp

atgagttcgaattcggatttggtgcggaagatggagtcggcacttgcggtttcgttcagaggctcaatgacggacacggcggtgctgattgcgatgacttcagttgggttgataatagggtttttggtggttctgtggtggagatctggggttgagttcttcattgcactgaccattccaacgtcaccagctccacgctggcgtgttccccagatccggcgccgctcgcccgctcccttgcttcacctgcaacgcggctcttcgcaactccgacgaggactggaggttcggagaggtgagagaagtcggcggcgagctccagaggtgcttcgatctggtggtcttggtcgggctcttgacttgggtgcccagagggcatttggcgaggttttcagaaaagtccgatggccggctgtctgtcaccggattcgggcggccggtgacgggactccagcgaagtctcctatgcggaaaggaggcgagcagctcgtggaagcccagaagctgtcggctggagatgtgatgtggcaattagctgttggggcttgcaatttaaatgcaacgttggacatagatgcagatgaggaaaacgccgatgcaactcccaatccttcagtgaggcctcaaggaaagaaggctgccaaagaagctattcggaaaggaaagaaagcatctaatgattccagtcctctgacagccgctatggagactatagcaaccaaccaaacatcaatgctgtctgccaaggagaaacgtgatgaggaatatgctcgacatctccgtgaccaacaacaacgagattatatacgcttgcaattcgatattcaagagagggaattcaaaattcaagagagggacgagcgtattatggagatggacacaaataagatgacgccaacaaaaaagaattactggcaaagaaaacaaaaaaaaattgtggagaaagaagctgaagatgcaacccgtggatctaacatcccacaaccaccattcaccggtggatattatccacaacctcctttccccggtggctatccacaaccaccattcaccggtggagtcccttccccacctttctctttgggtgaatccaccaaccccaaccatatggatgaccccacaaacacaaattggattcctaatgaagatgaagattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006725 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009698 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

385

Amino Acids

43.08

Weight (kDa)

9.64

Isoelectric Point (pI)

60.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000127)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02381 FvH4_1g19463 FvH4_1g28433 FvH4_2g16143 FvH4_2g18491 FvH4_2g27711 FvH4_3g19631 FvH4_3g23573 FvH4_4g35743 FvH4_5g23701 FvH4_6g19603 FvH4_6g39781 FvH4_6g40561 FvH4_7g02563 FvH4_7g11472 FvH4_7g17530
rosa_chinensis	RchiOBHm_Chr1g0315991 RchiOBHm_Chr1g0318371 RchiOBHm_Chr1g0328341 RchiOBHm_Chr1g0331431 RchiOBHm_Chr1g0344801 RchiOBHm_Chr1g0371461 RchiOBHm_Chr1g0379261 RchiOBHm_Chr2g0117661 RchiOBHm_Chr5g0011791 RchiOBHm_Chr5g0020991 RchiOBHm_Chr5g0060631 RchiOBHm_Chr5g0064181 RchiOBHm_Chr5g0080181 RchiOBHm_Chr6g0254691 RchiOBHm_Chr6g0260101 RchiOBHm_Chr6g0290901 RchiOBHm_Chr7g0201691
rosa_laevigata	RLG00000003529 RLG00000009370 RLG00000013568
rosa_multiflora	Rmu_co8437743.1_g000001 Rmu_sc0000063.1_g000028 Rmu_sc0000098.1_g000004 Rmu_sc0000166.1_g000028 Rmu_sc0000258.1_g000102 Rmu_sc0000288.1_g000018 Rmu_sc0000333.1_g000043 Rmu_sc0000451.1_g000011 Rmu_sc0000455.1_g000003 Rmu_sc0000479.1_g000002 Rmu_sc0000687.1_g000014 Rmu_sc0000733.1_g000024 Rmu_sc0000736.1_g000001 Rmu_sc0000745.1_g000017 Rmu_sc0000760.1_g000031 Rmu_sc0000776.1_g000044 Rmu_sc0000828.1_g000011 Rmu_sc0000830.1_g000027 Rmu_sc0000857.1_g000025 Rmu_sc0000864.1_g000013 Rmu_sc0001016.1_g000034 Rmu_sc0001016.1_g000035 Rmu_sc0001036.1_g000015 Rmu_sc0001096.1_g000020 Rmu_sc0001145.1_g000023 Rmu_sc0001167.1_g000057 Rmu_sc0001173.1_g000030 Rmu_sc0001260.1_g000006 Rmu_sc0001266.1_g000016 Rmu_sc0001346.1_g000003 Rmu_sc0001346.1_g000004 Rmu_sc0001386.1_g000005 Rmu_sc0001501.1_g000057 Rmu_sc0001565.1_g000058 Rmu_sc0001634.1_g000047 Rmu_sc0001699.1_g000018 Rmu_sc0001700.1_g000041 Rmu_sc0001700.1_g000055 Rmu_sc0001725.1_g000005 Rmu_sc0001823.1_g000005 Rmu_sc0001877.1_g000014 Rmu_sc0001942.1_g000059 Rmu_sc0001966.1_g000033 Rmu_sc0001998.1_g000009 Rmu_sc0002011.1_g000030 Rmu_sc0002147.1_g000007 Rmu_sc0002176.1_g000005 Rmu_sc0002235.1_g000097 Rmu_sc0002324.1_g000002 Rmu_sc0002352.1_g000011 Rmu_sc0002365.1_g000022 Rmu_sc0002548.1_g000007 Rmu_sc0002890.1_g000008 Rmu_sc0002936.1_g000003 Rmu_sc0002955.1_g000016 Rmu_sc0003160.1_g000032 Rmu_sc0003452.1_g000010 Rmu_sc0003490.1_g000023 Rmu_sc0003541.1_g000014 Rmu_sc0003555.1_g000014 Rmu_sc0003759.1_g000008 Rmu_sc0003843.1_g000001 Rmu_sc0003846.1_g000005 Rmu_sc0003890.1_g000019 Rmu_sc0003953.1_g000016 Rmu_sc0003967.1_g000001 Rmu_sc0004068.1_g000002 Rmu_sc0004101.1_g000004 Rmu_sc0004298.1_g000010 Rmu_sc0004507.1_g000008 Rmu_sc0004649.1_g000015 Rmu_sc0004719.1_g000006 Rmu_sc0004751.1_g000012 Rmu_sc0004821.1_g000005 Rmu_sc0004868.1_g000003 Rmu_sc0004876.1_g000023 Rmu_sc0004932.1_g000020 Rmu_sc0005093.1_g000020 Rmu_sc0005132.1_g000019 Rmu_sc0005274.1_g000001 Rmu_sc0005381.1_g000013 Rmu_sc0005693.1_g000009 Rmu_sc0005708.1_g000011 Rmu_sc0005834.1_g000016 Rmu_sc0005966.1_g000017 Rmu_sc0006173.1_g000033 Rmu_sc0006175.1_g000012 Rmu_sc0006590.1_g000004 Rmu_sc0006695.1_g000044 Rmu_sc0007061.1_g000002 Rmu_sc0007069.1_g000023 Rmu_sc0007216.1_g000006 Rmu_sc0008124.1_g000026 Rmu_sc0008148.1_g000028 Rmu_sc0008198.1_g000004 Rmu_sc0008423.1_g000003 Rmu_sc0008441.1_g000011 Rmu_sc0008707.1_g000005 Rmu_sc0009101.1_g000008 Rmu_sc0009240.1_g000039 Rmu_sc0009414.1_g000002 Rmu_sc0009628.1_g000001 Rmu_sc0010048.1_g000007 Rmu_sc0010275.1_g000001 Rmu_sc0010338.1_g000004 Rmu_sc0010659.1_g000005 Rmu_sc0010691.1_g000001 Rmu_sc0011023.1_g000006 Rmu_sc0011533.1_g000001 Rmu_sc0011901.1_g000001 Rmu_sc0012746.1_g000042 Rmu_sc0012773.1_g000005 Rmu_sc0012952.1_g000005 Rmu_sc0014568.1_g000002 Rmu_sc0014568.1_g000003 Rmu_sc0015188.1_g000004 Rmu_sc0019714.1_g000001 Rmu_sc0020148.1_g000003 Rmu_sc0020260.1_g000003 Rmu_sc0021213.1_g000002 Rmu_sc0022616.1_g000001 Rmu_ssc0000084.1_g000006 Rmu_ssc0000116.1_g000017 Rmu_ssc0000116.1_g000018 Rmu_ssc0000189.1_g000037 Rmu_ssc0000330.1_g000009 Rmu_ssc0000359.1_g000004 Rmu_ssc0000366.1_g000031 Rmu_ssc0000386.1_g000056 Rmu_ssc0000387.1_g000006 Rmu_ssc0000400.1_g000065 Rmu_ssc0000440.1_g000006 Rmu_ssc0000452.1_g000014
rosa_roxburghii	Rroxscaffold_1G00020180 Rroxscaffold_2G00089580 Rroxscaffold_2G00143500 Rroxscaffold_3G00264360 Rroxscaffold_4G00316450 Rroxscaffold_4G00327050 Rroxscaffold_5G00350260 Rroxscaffold_5G00351750 Rroxscaffold_5G00364680 Rroxscaffold_5G00376220 Rroxscaffold_6G00391720
rosa_rugosa	Rorug04G0096700 Rorug05G0284300 Rorug06G0059800 Rorug06G0059900 Rorug06G0060000 Rorug06G0060100 Rorug06G0060200 Rorug06G0127700 Rorug06G0243400
rosa_samantha	Rh1AG033000 Rh1AG274600 Rh1DG069700 Rh2DG069900 Rh2DG210700 Rh2DG560100 Rh3AG245500 Rh3BG095400 Rh4AG018100 Rh4AG084900 Rh4AG177900 Rh4CG092300 Rh4CG194700 Rh5BG350600 Rh6BG362400 Rh7DG198200 Rh7DG403500
rosa_wichuraiana	Rw1G008260 Rw1G035940 Rw2G027180 Rw4G003470 Rw4G010610 Rw5G037240 Rw6G036490 Rw7G015690 Rw7G028950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	255
Acc36I	ACCTGC	1 cut(s)	255
AccB1I	GGYRCC	2 cut(s)	219, 365
AccBSI	CCGCTC	2 cut(s)	225, 233
AccII	CGCG	1 cut(s)	255
AclI	AACGTT	1 cut(s)	563
AclWI	GGATC	2 cut(s)	208, 976
AcoI	YGGCCR	2 cut(s)	407, 435
AcsI	RAATTY	3 cut(s)	10, 836, 843
AcuI	CTGAAG	3 cut(s)	84, 597, 972
AcyI	GRCGYC	2 cut(s)	220, 893
AfiI	CCNNNNNNNGG	7 cut(s)	216, 409, 430, 444, 995, 1025, 1052
AgeI	ACCGGT	2 cut(s)	995, 1052
AgsI	TTSAA	3 cut(s)	827, 841, 848
AjuI	GAANNNNNNNTTGG	1 cut(s)	34
AleI	CACNNNNGTG	1 cut(s)	80
AloI	GAACNNNNNNTCC	2 cut(s)	270, 302
AluBI	AGCT	7 cut(s)	191, 317, 487, 505, 536, 650, 950
AluI	AGCT	7 cut(s)	191, 317, 487, 505, 536, 650, 950
Alw21I	GWGCWC	1 cut(s)	319
Alw26I	GTCTC	2 cut(s)	465, 701
AlwI	GGATC	2 cut(s)	208, 976
AlwNI	CAGNNNCTG	1 cut(s)	505
AoxI	GGCC	3 cut(s)	407, 435, 620
ApeKI	GCWGC	2 cut(s)	484, 638
ApoI	RAATTY	3 cut(s)	10, 836, 843
ArsI	GACNNNNNNTTYG	2 cut(s)	270, 302
AsiGI	ACCGGT	2 cut(s)	995, 1052
Asp700I	GAANNNNTTC	1 cut(s)	651
AspLEI	GCGC	1 cut(s)	222
AsuC2I	CCSGG	1 cut(s)	1026
AsuHPI	GGTGA	8 cut(s)	177, 236, 308, 413, 452, 985, 1042, 1097
AsuII	TTCGAA	1 cut(s)	8
BaeGI	GKGCMC	1 cut(s)	370
BanI	GGYRCC	2 cut(s)	219, 365
BanII	GRGCYC	2 cut(s)	319, 355
BauI	CACGAG	1 cut(s)	488
Bbv12I	GWGCWC	1 cut(s)	319
BbvI	GCAGC	2 cut(s)	496, 625
BccI	CCATC	3 cut(s)	25, 399, 868
BceAI	ACGGC	1 cut(s)	93
BcnI	CCSGG	1 cut(s)	1026
BcoDI	GTCTC	2 cut(s)	465, 701
BfmI	CTRYAG	1 cut(s)	711
BfoI	RGCGCY	1 cut(s)	223
BfuAI	ACCTGC	1 cut(s)	255
BglI	GCCNNNNNGGC	1 cut(s)	374
BglII	AGATCT	1 cut(s)	143
BisI	GCNGC	7 cut(s)	223, 256, 311, 435, 485, 639, 699
BlsI	GCNGC	7 cut(s)	224, 257, 312, 436, 486, 640, 700
Bme1390I	CCNGG	1 cut(s)	1026
BmiI	GGNNCC	2 cut(s)	221, 367
BmrFI	CCNGG	1 cut(s)	1026
BmsI	GCATC	4 cut(s)	565, 586, 680, 946
BpmI	CTGGAG	4 cut(s)	302, 303, 435, 534
Bpu14I	TTCGAA	1 cut(s)	8
BpuEI	CTTGAG	1 cut(s)	609
BpuMI	CCSGG	1 cut(s)	1026
BsaHI	GRCGYC	2 cut(s)	220, 893
BsaJI	CCNNGG	3 cut(s)	744, 964, 1024
BsaWI	WCCGGW	3 cut(s)	423, 995, 1052
Bsc4I	CCNNNNNNNGG	7 cut(s)	216, 409, 430, 444, 995, 1025, 1052
Bse118I	RCCGGY	4 cut(s)	409, 437, 995, 1052
Bse1I	ACTGG	3 cut(s)	285, 684, 917
Bse3DI	GCAATG	1 cut(s)	162
BseDI	CCNNGG	3 cut(s)	744, 964, 1024
BseGI	GGATG	2 cut(s)	975, 1117
BseLI	CCNNNNNNNGG	7 cut(s)	216, 409, 430, 444, 995, 1025, 1052
BseMI	GCAATG	1 cut(s)	162
BseNI	ACTGG	3 cut(s)	285, 684, 917
BseSI	GKGCMC	1 cut(s)	370
BseX3I	CGGCCG	1 cut(s)	435
BseXI	GCAGC	2 cut(s)	496, 625
Bsh1236I	CGCG	1 cut(s)	255
Bsh1285I	CGRYCG	1 cut(s)	438
BshFI	GGCC	3 cut(s)	409, 437, 622
BshNI	GGYRCC	2 cut(s)	219, 365
BshTI	ACCGGT	2 cut(s)	995, 1052
BsiEI	CGRYCG	1 cut(s)	438
BsiHKAI	GWGCWC	1 cut(s)	319
BsiSI	CCGG	7 cut(s)	217, 410, 424, 438, 996, 1026, 1053
BslFI	GGGAC	3 cut(s)	460, 869, 1046
BslI	CCNNNNNNNGG	7 cut(s)	216, 409, 430, 444, 995, 1025, 1052
BsmAI	GTCTC	2 cut(s)	465, 701
BsmFI	GGGAC	3 cut(s)	460, 869, 1046
BsnI	GGCC	3 cut(s)	409, 437, 622
Bsp119I	TTCGAA	1 cut(s)	8
Bsp1286I	GDGCHC	3 cut(s)	319, 355, 370
Bsp143I	GATC	4 cut(s)	143, 213, 332, 968
BspANI	GGCC	3 cut(s)	409, 437, 622
BspFNI	CGCG	1 cut(s)	255
BspLI	GGNNCC	2 cut(s)	221, 367
BspMI	ACCTGC	1 cut(s)	255
BspPI	GGATC	2 cut(s)	208, 976
BspQI	GCTCTTC	1 cut(s)	265
BspT104I	TTCGAA	1 cut(s)	8
BspT107I	GGYRCC	2 cut(s)	219, 365
BsrBI	CCGCTC	2 cut(s)	225, 233
BsrDI	GCAATG	1 cut(s)	162
BsrFI	RCCGGY	4 cut(s)	409, 437, 995, 1052
BsrI	ACTGG	3 cut(s)	285, 684, 917
BssAI	RCCGGY	4 cut(s)	409, 437, 995, 1052
BssECI	CCNNGG	3 cut(s)	744, 964, 1024
BssMI	GATC	4 cut(s)	143, 213, 332, 968
BssNI	GRCGYC	2 cut(s)	220, 893
BssSI	CACGAG	1 cut(s)	488
BssT1I	CCWWGG	1 cut(s)	744
Bst2BI	CACGAG	1 cut(s)	488
Bst6I	CTCTTC	1 cut(s)	265
BstACI	GRCGYC	2 cut(s)	220, 893
BstBI	TTCGAA	1 cut(s)	8
BstC8I	GCNNGC	8 cut(s)	200, 227, 231, 315, 411, 482, 547, 812
BstDSI	CCRYGG	1 cut(s)	964
BstF5I	GGATG	2 cut(s)	975, 1117
BstFNI	CGCG	1 cut(s)	255
BstH2I	RGCGCY	1 cut(s)	223
BstHHI	GCGC	1 cut(s)	222
BstKTI	GATC	4 cut(s)	146, 216, 335, 971
BstMAI	GTCTC	2 cut(s)	465, 701
BstMBI	GATC	4 cut(s)	143, 213, 332, 968
BstMCI	CGRYCG	1 cut(s)	438
BstMWI	GCNNNNNNNGC	6 cut(s)	226, 247, 374, 542, 647, 956
BstSCI	CCNGG	1 cut(s)	1024
BstSFI	CTRYAG	1 cut(s)	711
BstSLI	GKGCMC	1 cut(s)	370
BstUI	CGCG	1 cut(s)	255
BstV1I	GCAGC	2 cut(s)	496, 625
BstX2I	RGATCY	3 cut(s)	143, 213, 968
BstXI	CCANNNNNNTGG	1 cut(s)	1108
BstYI	RGATCY	3 cut(s)	143, 213, 968
BstZI	CGGCCG	1 cut(s)	435
BsuRI	GGCC	3 cut(s)	409, 437, 622
BtgI	CCRYGG	1 cut(s)	964
BtgZI	GCGATG	1 cut(s)	107
BtsCI	GGATG	2 cut(s)	975, 1117
BtsIMutI	CAGTG	2 cut(s)	167, 621
BveI	ACCTGC	1 cut(s)	255
Cac8I	GCNNGC	8 cut(s)	200, 227, 231, 315, 411, 482, 547, 812
CaiI	CAGNNNCTG	1 cut(s)	505
CfoI	GCGC	1 cut(s)	222
Cfr10I	RCCGGY	4 cut(s)	409, 437, 995, 1052
CseI	GACGC	1 cut(s)	901
CspAI	ACCGGT	2 cut(s)	995, 1052
DinI	GGCGCC	1 cut(s)	221
DpnI	GATC	4 cut(s)	145, 215, 334, 970
DpnII	GATC	4 cut(s)	143, 213, 332, 968
DraI	TTTAAA	1 cut(s)	555
EaeI	YGGCCR	2 cut(s)	407, 435
EagI	CGGCCG	1 cut(s)	435
Eam1104I	CTCTTC	1 cut(s)	265
EarI	CTCTTC	1 cut(s)	265
Ecl136II	GAGCTC	1 cut(s)	317
EclXI	CGGCCG	1 cut(s)	435
Eco130I	CCWWGG	1 cut(s)	744
Eco147I	AGGCCT	1 cut(s)	622
Eco24I	GRGCYC	2 cut(s)	319, 355
Eco52I	CGGCCG	1 cut(s)	435
Eco53kI	GAGCTC	1 cut(s)	317
Eco57I	CTGAAG	3 cut(s)	84, 597, 972
EcoICRI	GAGCTC	1 cut(s)	317
EcoRI	GAATTC	2 cut(s)	10, 836
EcoT14I	CCWWGG	1 cut(s)	744
EcoT38I	GRGCYC	2 cut(s)	319, 355
EgeI	GGCGCC	1 cut(s)	221
EheI	GGCGCC	1 cut(s)	221
ErhI	CCWWGG	1 cut(s)	744
FaqI	GGGAC	3 cut(s)	460, 869, 1046
FauI	CCCGC	1 cut(s)	238
FauNDI	CATATG	1 cut(s)	1107
Fnu4HI	GCNGC	7 cut(s)	223, 256, 311, 435, 485, 639, 699
FokI	GGATG	2 cut(s)	962, 1124
FriOI	GRGCYC	2 cut(s)	319, 355
Fsp4HI	GCNGC	7 cut(s)	223, 256, 311, 435, 485, 639, 699
GlaI	GCGC	1 cut(s)	221
GluI	GCNGC	7 cut(s)	223, 256, 311, 435, 485, 639, 699
GsuI	CTGGAG	4 cut(s)	302, 303, 435, 534
HaeII	RGCGCY	1 cut(s)	223
HaeIII	GGCC	3 cut(s)	409, 437, 622
HapII	CCGG	7 cut(s)	217, 410, 424, 438, 996, 1026, 1053
HgaI	GACGC	1 cut(s)	901
HhaI	GCGC	1 cut(s)	222
Hin1I	GRCGYC	2 cut(s)	220, 893
Hin6I	GCGC	1 cut(s)	220
HinP1I	GCGC	1 cut(s)	220
HinfI	GANTC	7 cut(s)	35, 427, 448, 680, 1059, 1088, 1135
HpaII	CCGG	7 cut(s)	217, 410, 424, 438, 996, 1026, 1053
HphI	GGTGA	8 cut(s)	177, 236, 308, 413, 452, 985, 1042, 1097
Hpy188I	TCNGA	8 cut(s)	16, 59, 272, 291, 395, 404, 657, 693
Hpy188III	TCNNGA	4 cut(s)	320, 356, 827, 848
Hpy99I	CGWCG	1 cut(s)	276
HpyAV	CCTTC	3 cut(s)	621, 628, 1074
HpyCH4IV	ACGT	3 cut(s)	182, 563, 754
HpyCH4V	TGCA	8 cut(s)	167, 250, 549, 560, 578, 599, 814, 959
HpyF10VI	GCNNNNNNNGC	6 cut(s)	226, 247, 374, 542, 647, 956
HpySE526I	ACGT	3 cut(s)	182, 563, 754
Hsp92I	GRCGYC	2 cut(s)	220, 893
HspAI	GCGC	1 cut(s)	220
KasI	GGCGCC	1 cut(s)	219
KroI	GCCGGC	1 cut(s)	409
KroNI	GCCGGC	1 cut(s)	411
Kzo9I	GATC	4 cut(s)	143, 213, 332, 968
LguI	GCTCTTC	1 cut(s)	265
LmnI	GCTCC	3 cut(s)	196, 238, 322
Lsp1109I	GCAGC	2 cut(s)	496, 625
LweI	GCATC	4 cut(s)	565, 586, 680, 946
MaeII	ACGT	3 cut(s)	182, 563, 754
MaeIII	GTNAC	4 cut(s)	183, 419, 440, 782
MalI	GATC	4 cut(s)	145, 215, 334, 970
MbiI	CCGCTC	2 cut(s)	225, 233
MboI	GATC	4 cut(s)	143, 213, 332, 968
MboII	GAAGA	5 cut(s)	40, 151, 252, 965, 1157
MflI	RGATCY	3 cut(s)	143, 213, 968
MhlI	GDGCHC	3 cut(s)	319, 355, 370
MluCI	AATT	9 cut(s)	10, 530, 550, 815, 836, 843, 907, 933, 1129
Mly113I	GGCGCC	1 cut(s)	220
MlyI	GAGTC	3 cut(s)	44, 442, 1068
MmeI	TCCRAC	3 cut(s)	203, 295, 546
MroNI	GCCGGC	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	651
MseI	TTAA	1 cut(s)	554
MslI	CAYNNNNRTG	3 cut(s)	80, 780, 1110
MspI	CCGG	7 cut(s)	217, 410, 424, 438, 996, 1026, 1053
MspR9I	CCNGG	1 cut(s)	1026
MvnI	CGCG	1 cut(s)	255
MwoI	GCNNNNNNNGC	6 cut(s)	226, 247, 374, 542, 647, 956
NaeI	GCCGGC	1 cut(s)	411
NarI	GGCGCC	1 cut(s)	220
NciI	CCSGG	1 cut(s)	1026
NdeI	CATATG	1 cut(s)	1107
NdeII	GATC	4 cut(s)	143, 213, 332, 968
NgoMIV	GCCGGC	1 cut(s)	409
NlaIV	GGNNCC	2 cut(s)	221, 367
NmuCI	GTSAC	4 cut(s)	183, 419, 440, 782
NspV	TTCGAA	1 cut(s)	8
OliI	CACNNNNGTG	1 cut(s)	80
PaqCI	CACCTGC	1 cut(s)	255
PceI	AGGCCT	1 cut(s)	622
PciSI	GCTCTTC	1 cut(s)	265
PcsI	WCGNNNNNNNCGW	1 cut(s)	778
PdiI	GCCGGC	1 cut(s)	411
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	4 cut(s)	427, 680, 1088, 1135
PinAI	ACCGGT	2 cut(s)	995, 1052
PkrI	GCNGC	7 cut(s)	224, 257, 312, 436, 486, 640, 700
PleI	GAGTC	3 cut(s)	43, 442, 1067
PluTI	GGCGCC	1 cut(s)	223
PpsI	GAGTC	3 cut(s)	43, 442, 1067
Psp124BI	GAGCTC	1 cut(s)	319
Psp1406I	AACGTT	1 cut(s)	563
PspN4I	GGNNCC	2 cut(s)	221, 367
PstNI	CAGNNNCTG	1 cut(s)	505
PsuI	RGATCY	3 cut(s)	143, 213, 968
RseI	CAYNNNNRTG	3 cut(s)	80, 780, 1110
SacI	GAGCTC	1 cut(s)	319
SapI	GCTCTTC	1 cut(s)	265
SaqAI	TTAA	1 cut(s)	554
SatI	GCNGC	7 cut(s)	223, 256, 311, 435, 485, 639, 699
Sau3AI	GATC	4 cut(s)	143, 213, 332, 968
SchI	GAGTC	3 cut(s)	44, 442, 1068
ScrFI	CCNGG	1 cut(s)	1026
SduI	GDGCHC	3 cut(s)	319, 355, 370
SfaNI	GCATC	4 cut(s)	565, 586, 680, 946
SfcI	CTRYAG	1 cut(s)	711
SfoI	GGCGCC	1 cut(s)	221
SfuI	TTCGAA	1 cut(s)	8
SgrAI	CRCCGGYG	2 cut(s)	995, 1052
SmiI	ATTTAAAT	1 cut(s)	555
SmiMI	CAYNNNNRTG	3 cut(s)	80, 780, 1110
SmlI	CTYRAG	1 cut(s)	624
SmoI	CTYRAG	1 cut(s)	624
Sse9I	AATT	9 cut(s)	10, 530, 550, 815, 836, 843, 907, 933, 1129
SseBI	AGGCCT	1 cut(s)	622
SspDI	GGCGCC	1 cut(s)	219
SstI	GAGCTC	1 cut(s)	319
StuI	AGGCCT	1 cut(s)	622
StyD4I	CCNGG	1 cut(s)	1024
StyI	CCWWGG	1 cut(s)	744
SwaI	ATTTAAAT	1 cut(s)	555
TaiI	ACGT	3 cut(s)	185, 566, 757
TaqI	TCGA	4 cut(s)	8, 331, 772, 819
TasI	AATT	9 cut(s)	10, 530, 550, 815, 836, 843, 907, 933, 1129
TauI	GCSGC	5 cut(s)	225, 258, 313, 437, 701
TfiI	GAWTC	4 cut(s)	427, 680, 1088, 1135
Tru1I	TTAA	1 cut(s)	554
Tru9I	TTAA	1 cut(s)	554
TscAI	CASTG	2 cut(s)	174, 621
TseFI	GTSAC	4 cut(s)	183, 419, 440, 782
TseI	GCWGC	2 cut(s)	484, 638
Tsp45I	GTSAC	4 cut(s)	183, 419, 440, 782
TspDTI	ATGAA	2 cut(s)	151, 1158
TspGWI	ACGGA	2 cut(s)	86, 770
TspRI	CASTG	2 cut(s)	174, 621
XapI	RAATTY	3 cut(s)	10, 836, 843
XcmI	CCANNNNNNNNNTGG	2 cut(s)	195, 377
XmnI	GAANNNNTTC	1 cut(s)	651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.