Rorug04G0038100

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000672
Physical Location & Seq
Reverse (-)
5715835 .. 5718405
2571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0038100.1

Sequence Viewer

Length: 2121 bp
ATGGAGAAGGGCAATCCGGACAAACGGGTGAGAACATCACTGGGGGTTGATAATGATACAAGTGTAGGTACGTACGACGCAGAGAAGAAAGTTTGCAGCAGGACTCGGCGAATATCTCGTAGAAAATGCCCTGCTAGGTTGACTGTTATGTACTGTCCGCAACGCGGTGCATACTATCCATCGGCATTTATCACCGCACACAACCATCGTTTGGCTGGACATGAGCATAGGCAGTTTCTGAGGTCCAATCGGAAGGTTGCGGACCATGACTTGGCTCAGGTGATTTCGCTGAGGAAGGTTTCTATAGGTACTGCGCGTGCATATGAGTTCCTCGTACACCAAGCAGGAGGTCATGAGTTTGTTGGATTCATGCTAAGGGACCTGCAGAATAGAATTCAGACACACCATGCCGATATATTAATGGACGGGGATGCACAATCTTCTGTGACTTGGATGAATTTGAAAGCCATACGGGACCCGAATTTCTACTGCATATTCAGTGTGGACGAGAAGGGCAGGCTTGCAAATATGTTTTGGCGCGATGGACAGTCATTTCGTGATTACAATATGTTTAGGGATATTCTCATATTCGACAGCACATACAAGACAAACATCTATGGCAAGCCGTTGGCTGTATTTGTTGGAACCAACAACCATAGAGCAACAATTATGTTTGGTTGTGCCTTGTTAGTTGACGAAACGGAGGAAACATACGATTGGGTGTTGAGAGCGTTTCTTAGTTCAATGAAGGATAAGAAACCTATTTCTGTGATCAGTGACAGCGATAATGCAATTCGTAATGCTGTTGACAATCTGATCCTGGGCGCAAGACATCGTCTATGTGCATGGCACATTGGGAAAAATGTTTGTTCTCATCTGAATGACGAGGTCACCCGACGAGATTTCTTCCACTTGATATTTGCAGGCTTGATGGTTGAAGAATGGGAAGACAGTTGGCAGTATTTTGTTGGAATGAACAGGTTGGAAAATAATGAATGGAATGCCAGCATGTACGCGAAAAGAGAAAGGTGGGCGGAGGCATTTTTCCGAGACCATTTTTTTGGGGGAATATGTAGCACCCAAAGATGCGAGGGGATGCATAGAAATTTGAAAGGCGGTATTGGTGGTCACATGAGGCTGTATGAGGTGTTGCCCCGGATGGAGAAAACCATTGACCGAATAAGGAATCGGGTCCAATATGATGATCACAGATCAAAGCAGTTTTCCCCGGTGTACAGCACACACATGCGTAACTTGGAAAAGGGTATAGGGGGGATTTTTAGTCATGATGTATTCCTTTTAGTGAGGGATCAGATTTTATACGAGGCCAAGTTTGTAGTCGGGCTGAAGGAGATAAATACAGTAAGCGGCCTATTTGTGGTTCCGATCAACCAATATGCAAAGCCGGAGCGGTTATGGACCGTGTCATACCGGCTTGATAAAGTGAATCCAAGTTTTGGCTATTCTTGCAAGCTGTTTGAGTCGGATGGCATTCCGTGTTGCAATATATTTGCAGTAATGAAATGCGAGGGGATTACATCATATCCAGCATCATTGGTTAATCAAAGGTGGACCAAAGAACCGGGGAGAAATCAGAATATGGCCGGGATTTCGGATGACAAGGGTGTTCAGGTTGCGAGGTACGGTGAACTAATGACCAGTTTTGCTAAAATTGCCCACATTGCATCACATAGCGAGGAGGGGTACGATGACTTCAAGGAAGTGCTAAGCTGGCTTGCGATAGAAAGTGAGAAGTATCATCAACCCAACCCCACTCACCCCGAATCTGTTATTGATGGTTCAACCGGCCTGCACCCTAATGTGATAAGGGACCCTGTGCCTTGTAGGAGTAAAGGGTTGAAAGTTAAAACCGGTGCCGGGAGGAAGAAAACCAAAAAAACTGTGACTTGCACACTTTGTCGACAAAAGGGCCACAACATGAGAACTTGCTTGGCTGGTGTTAATGAGAAGGGTAAGAATTCAGGGAAGGAAAAAAATAAGGGATTTAGGCCAACAAAGACAAACAGCGAGGAGGATGACATGAGCAATTGTGAGGCCGATGATAGCTCGGATAATGTTGACAAGAACAGAGAAGATGAGTGTAGCAATGACGTACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IQ zf-RING_2

Protein Analysis

706

Amino Acids

80.79

Weight (kDa)

8.83

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ZSWIM1-3_RNaseH-like PF21056 166 - 258 1.5e-06 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 195 - 288 1.2e-23 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 390
AccB1I GGYRCC 1 cut(s) 1874
AccB7I CCANNNNNTGG 3 cut(s) 211, 271, 1457
AccBSI CCGCTC 1 cut(s) 1411
AccI GTMKAC 1 cut(s) 1921
AccII CGCG 4 cut(s) 165, 316, 540, 1016
AccIII TCCGGA 1 cut(s) 16
AciI CCGC 8 cut(s) 158, 165, 195, 260, 1034, 1116, 1368, 1411
AclWI GGATC 2 cut(s) 811, 1317
AcoI YGGCCR 1 cut(s) 1602
AcsI RAATTY 5 cut(s) 393, 457, 481, 1105, 1978
AcuI CTGAAG 1 cut(s) 1367
AfiI CCNNNNNNNGG 6 cut(s) 164, 211, 271, 1378, 1457, 1878
AgeI ACCGGT 1 cut(s) 1871
AgsI TTSAA 7 cut(s) 463, 744, 938, 1111, 1717, 1803, 1861
AjnI CCWGG 1 cut(s) 819
AluBI AGCT 3 cut(s) 1474, 1731, 2067
AluI AGCT 3 cut(s) 1474, 1731, 2067
Alw26I GTCTC 1 cut(s) 1044
AlwI GGATC 2 cut(s) 811, 1317
AlwNI CAGNNNCTG 1 cut(s) 238
Aor13HI TCCGGA 1 cut(s) 16
AoxI GGCC 7 cut(s) 1326, 1369, 1602, 1807, 1930, 2009, 2055
ApeKI GCWGC 1 cut(s) 96
ApoI RAATTY 5 cut(s) 393, 457, 481, 1105, 1978
ArsI GACNNNNNNTTYG 4 cut(s) 537, 569, 1043, 1075
AseI ATTAAT 1 cut(s) 419
AsiGI ACCGGT 1 cut(s) 1871
AspLEI GCGC 3 cut(s) 316, 540, 827
AspS9I GGNCC 9 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831, 1930
AsuC2I CCSGG 5 cut(s) 1156, 1229, 1584, 1606, 1879
AsuHPI GGTGA 6 cut(s) 40, 184, 292, 883, 1658, 1769
AvaII GGWCC 8 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831
BaeI ACNNNNGTAYC 2 cut(s) 48, 81
BanI GGYRCC 1 cut(s) 1874
BarI GAAGNNNNNNTAC 2 cut(s) 1697, 1729
BbsI GAAGAC 1 cut(s) 954
BbvCI CCTCAGC 1 cut(s) 290
BbvI GCAGC 1 cut(s) 108
BccI CCATC 7 cut(s) 187, 213, 536, 925, 1153, 1481, 1790
BceAI ACGGC 1 cut(s) 610
BciT130I CCWGG 1 cut(s) 821
BclI TGATCA 2 cut(s) 771, 1204
BcnI CCSGG 5 cut(s) 1156, 1229, 1584, 1606, 1879
BcoDI GTCTC 1 cut(s) 1044
BfaI CTAG 1 cut(s) 135
BfmI CTRYAG 2 cut(s) 303, 383
BfuAI ACCTGC 1 cut(s) 390
BisI GCNGC 2 cut(s) 97, 1369
BlpI GCTNAGC 1 cut(s) 1727
BlsI GCNGC 2 cut(s) 98, 1370
Bme1390I CCNGG 6 cut(s) 821, 1156, 1229, 1584, 1606, 1879
Bme18I GGWCC 8 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831
BmgT120I GGNCC 9 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831, 1930
BmiI GGNNCC 9 cut(s) 380, 476, 477, 646, 1193, 1383, 1832, 1833, 1876
BmrFI CCNGG 6 cut(s) 821, 1156, 1229, 1584, 1606, 1879
BmrI ACTGGG 1 cut(s) 50
BmsI GCATC 5 cut(s) 421, 1076, 1086, 1559, 1694
BmuI ACTGGG 1 cut(s) 50
BpiI GAAGAC 1 cut(s) 954
Bpu10I CCTNAGC 3 cut(s) 276, 290, 374
Bpu1102I GCTNAGC 1 cut(s) 1727
BpuMI CCSGG 5 cut(s) 1156, 1229, 1584, 1606, 1879
BsaAI YACGTR 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 1044
BsaJI CCNNGG 4 cut(s) 820, 1154, 1227, 1583
BsaWI WCCGGW 2 cut(s) 16, 1871
Bsc4I CCNNNNNNNGG 6 cut(s) 164, 211, 271, 1378, 1457, 1878
Bse118I RCCGGY 3 cut(s) 1431, 1805, 1871
Bse1I ACTGG 2 cut(s) 45, 1659
Bse3DI GCAATG 2 cut(s) 1680, 2113
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 1 cut(s) 821
BseDI CCNNGG 4 cut(s) 820, 1154, 1227, 1583
BseGI GGATG 7 cut(s) 436, 459, 1101, 1164, 1492, 1621, 2041
BseLI CCNNNNNNNGG 6 cut(s) 164, 211, 271, 1378, 1457, 1878
BseMI GCAATG 2 cut(s) 1680, 2113
BseMII CTCAG 3 cut(s) 230, 281, 290
BseNI ACTGG 2 cut(s) 45, 1659
BseRI GAGGAG 2 cut(s) 1712, 2045
BseXI GCAGC 1 cut(s) 108
BsgI GTGCAG 1 cut(s) 1796
Bsh1236I CGCG 4 cut(s) 165, 316, 540, 1016
BshFI GGCC 7 cut(s) 1328, 1371, 1604, 1809, 1932, 2011, 2057
BshNI GGYRCC 1 cut(s) 1874
BshTI ACCGGT 1 cut(s) 1871
BsiWI CGTACG 1 cut(s) 72
BslFI GGGAC 3 cut(s) 392, 488, 1844
BslI CCNNNNNNNGG 6 cut(s) 164, 211, 271, 1378, 1457, 1878
BsmAI GTCTC 1 cut(s) 1044
BsmFI GGGAC 3 cut(s) 392, 488, 1844
BsmI GAATGC 2 cut(s) 1006, 1491
BsnI GGCC 7 cut(s) 1328, 1371, 1604, 1809, 1932, 2011, 2057
Bso31I GGTCTC 1 cut(s) 1044
Bsp13I TCCGGA 1 cut(s) 16
Bsp1407I TGTACA 1 cut(s) 1233
Bsp143I GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
Bsp1720I GCTNAGC 1 cut(s) 1727
BspACI CCGC 8 cut(s) 158, 165, 195, 260, 1034, 1116, 1368, 1411
BspANI GGCC 7 cut(s) 1328, 1371, 1604, 1809, 1932, 2011, 2057
BspCNI CTCAG 3 cut(s) 231, 282, 289
BspEI TCCGGA 1 cut(s) 16
BspFNI CGCG 4 cut(s) 165, 316, 540, 1016
BspHI TCATGA 2 cut(s) 352, 1285
BspLI GGNNCC 9 cut(s) 380, 476, 477, 646, 1193, 1383, 1832, 1833, 1876
BspMAI CTGCAG 1 cut(s) 387
BspMI ACCTGC 1 cut(s) 390
BspPI GGATC 2 cut(s) 811, 1317
BspT107I GGYRCC 1 cut(s) 1874
BspTNI GGTCTC 1 cut(s) 1044
BsrBI CCGCTC 1 cut(s) 1411
BsrDI GCAATG 2 cut(s) 1680, 2113
BsrFI RCCGGY 3 cut(s) 1431, 1805, 1871
BsrGI TGTACA 1 cut(s) 1233
BsrI ACTGG 2 cut(s) 45, 1659
BssAI RCCGGY 3 cut(s) 1431, 1805, 1871
BssECI CCNNGG 4 cut(s) 820, 1154, 1227, 1583
BssMI GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
Bst2UI CCWGG 1 cut(s) 821
Bst4CI ACNGT 9 cut(s) 145, 155, 549, 953, 1363, 1423, 1646, 1903, 2118
BstAUI TGTACA 1 cut(s) 1233
BstBAI YACGTR 1 cut(s) 72
BstDEI CTNAG 6 cut(s) 239, 276, 290, 374, 737, 1727
BstEII GGTNACC 1 cut(s) 889
BstF5I GGATG 7 cut(s) 436, 459, 1101, 1164, 1492, 1621, 2041
BstFNI CGCG 4 cut(s) 165, 316, 540, 1016
BstHHI GCGC 3 cut(s) 316, 540, 827
BstKTI GATC 6 cut(s) 774, 819, 1207, 1214, 1312, 1389
BstMAI GTCTC 1 cut(s) 1044
BstMBI GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
BstMWI GCNNNNNNNGC 4 cut(s) 1467, 1673, 1682, 1732
BstNI CCWGG 1 cut(s) 821
BstNSI RCATGY 2 cut(s) 1012, 1249
BstPI GGTNACC 1 cut(s) 889
BstSCI CCNGG 6 cut(s) 819, 1154, 1227, 1582, 1604, 1877
BstSFI CTRYAG 2 cut(s) 303, 383
BstSNI TACGTA 1 cut(s) 72
BstUI CGCG 4 cut(s) 165, 316, 540, 1016
BstV1I GCAGC 1 cut(s) 108
BstV2I GAAGAC 1 cut(s) 954
BstXI CCANNNNNNTGG 1 cut(s) 1061
BsuRI GGCC 7 cut(s) 1328, 1371, 1604, 1809, 1932, 2011, 2057
BtgZI GCGATG 1 cut(s) 555
BtsCI GGATG 7 cut(s) 436, 459, 1101, 1164, 1492, 1621, 2041
BtsIMutI CAGTG 3 cut(s) 38, 505, 781
BveI ACCTGC 1 cut(s) 390
CaiI CAGNNNCTG 1 cut(s) 238
CciI TCATGA 2 cut(s) 352, 1285
CfoI GCGC 3 cut(s) 316, 540, 827
Cfr10I RCCGGY 3 cut(s) 1431, 1805, 1871
Cfr13I GGNCC 9 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831, 1930
CseI GACGC 1 cut(s) 86
CspAI ACCGGT 1 cut(s) 1871
DdeI CTNAG 6 cut(s) 239, 276, 290, 374, 737, 1727
DpnI GATC 6 cut(s) 773, 818, 1206, 1213, 1311, 1388
DpnII GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
EaeI YGGCCR 1 cut(s) 1602
EciI GGCGGA 1 cut(s) 1049
Eco105I TACGTA 1 cut(s) 72
Eco31I GGTCTC 1 cut(s) 1044
Eco47I GGWCC 8 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831
Eco57I CTGAAG 1 cut(s) 1367
Eco91I GGTNACC 1 cut(s) 889
EcoO109I RGGNCCY 3 cut(s) 379, 475, 1831
EcoO65I GGTNACC 1 cut(s) 889
EcoRI GAATTC 2 cut(s) 393, 1978
EcoRII CCWGG 1 cut(s) 819
EcoT22I ATGCAT 1 cut(s) 1101
FaqI GGGAC 3 cut(s) 392, 488, 1844
FauNDI CATATG 1 cut(s) 322
FbaI TGATCA 2 cut(s) 771, 1204
FblI GTMKAC 1 cut(s) 1921
Fnu4HI GCNGC 2 cut(s) 97, 1369
FokI GGATG 7 cut(s) 443, 466, 1108, 1171, 1499, 1628, 2048
Fsp4HI GCNGC 2 cut(s) 97, 1369
FspBI CTAG 1 cut(s) 135
GlaI GCGC 3 cut(s) 315, 539, 826
GluI GCNGC 2 cut(s) 97, 1369
HaeIII GGCC 7 cut(s) 1328, 1371, 1604, 1809, 1932, 2011, 2057
HgaI GACGC 1 cut(s) 86
HhaI GCGC 3 cut(s) 316, 540, 827
Hin6I GCGC 3 cut(s) 314, 538, 825
HinP1I GCGC 3 cut(s) 314, 538, 825
HincII GTYRAC 5 cut(s) 141, 694, 808, 1922, 2080
HindII GTYRAC 5 cut(s) 141, 694, 808, 1922, 2080
HinfI GANTC 6 cut(s) 103, 366, 1186, 1447, 1481, 1784
HphI GGTGA 6 cut(s) 40, 184, 292, 883, 1658, 1769
Hpy188III TCNNGA 4 cut(s) 17, 353, 557, 1286
Hpy99I CGWCG 2 cut(s) 80, 900
HpyAV CCTTC 7 cut(s) 247, 289, 505, 742, 1342, 1963, 1981
HpyCH4III ACNGT 9 cut(s) 145, 155, 549, 953, 1363, 1423, 1646, 1903, 2118
HpyCH4IV ACGT 2 cut(s) 71, 2112
HpyF10VI GCNNNNNNNGC 4 cut(s) 1467, 1673, 1682, 1732
HpyF3I CTNAG 6 cut(s) 239, 276, 290, 374, 737, 1727
HpySE526I ACGT 2 cut(s) 71, 2112
HspAI GCGC 3 cut(s) 314, 538, 825
KflI GGGWCCC 2 cut(s) 475, 1831
Kpn2I TCCGGA 1 cut(s) 16
Ksp22I TGATCA 2 cut(s) 771, 1204
Kzo9I GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
LmnI GCTCC 1 cut(s) 1408
Lsp1109I GCAGC 1 cut(s) 108
LweI GCATC 5 cut(s) 421, 1076, 1086, 1559, 1694
MaeI CTAG 1 cut(s) 135
MaeII ACGT 2 cut(s) 71, 2112
MaeIII GTNAC 6 cut(s) 445, 776, 889, 1127, 1250, 1903
MalI GATC 6 cut(s) 773, 818, 1206, 1213, 1311, 1388
MbiI CCGCTC 1 cut(s) 1411
MboI GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
MboII GAAGA 7 cut(s) 97, 432, 898, 950, 959, 1897, 2105
MfeI CAATTG 1 cut(s) 2047
MluCI AATT 9 cut(s) 393, 457, 481, 666, 792, 1105, 1671, 1978, 2047
MlyI GAGTC 2 cut(s) 97, 1490
MmeI TCCRAC 5 cut(s) 343, 622, 949, 963, 1464
Mph1103I ATGCAT 1 cut(s) 1101
MroI TCCGGA 1 cut(s) 16
MseI TTAA 4 cut(s) 419, 1560, 1866, 1962
MslI CAYNNNNRTG 3 cut(s) 879, 1244, 1818
MspR9I CCNGG 6 cut(s) 821, 1156, 1229, 1584, 1606, 1879
MunI CAATTG 1 cut(s) 2047
Mva1269I GAATGC 2 cut(s) 1006, 1491
MvaI CCWGG 1 cut(s) 821
MvnI CGCG 4 cut(s) 165, 316, 540, 1016
MwoI GCNNNNNNNGC 4 cut(s) 1467, 1673, 1682, 1732
NciI CCSGG 5 cut(s) 1156, 1229, 1584, 1606, 1879
NdeI CATATG 1 cut(s) 322
NdeII GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
NlaIV GGNNCC 9 cut(s) 380, 476, 477, 646, 1193, 1383, 1832, 1833, 1876
NmeAIII GCCGAG 1 cut(s) 85
NmuCI GTSAC 5 cut(s) 445, 776, 889, 1127, 1903
NsiI ATGCAT 1 cut(s) 1101
NspI RCATGY 2 cut(s) 1012, 1249
PagI TCATGA 2 cut(s) 352, 1285
PctI GAATGC 2 cut(s) 1006, 1491
PfeI GAWTC 4 cut(s) 366, 1186, 1447, 1784
Pfl23II CGTACG 1 cut(s) 72
PflFI GACNNNGTC 3 cut(s) 834, 887, 1423
PflMI CCANNNNNTGG 3 cut(s) 211, 271, 1457
PinAI ACCGGT 1 cut(s) 1871
PkrI GCNGC 2 cut(s) 98, 1370
PleI GAGTC 2 cut(s) 97, 1489
PpsI GAGTC 2 cut(s) 97, 1489
Ppu21I YACGTR 1 cut(s) 72
PpuMI RGGWCCY 3 cut(s) 379, 475, 1831
PshBI ATTAAT 1 cut(s) 419
Psp5II RGGWCCY 3 cut(s) 379, 475, 1831
Psp6I CCWGG 1 cut(s) 819
PspEI GGTNACC 1 cut(s) 889
PspGI CCWGG 1 cut(s) 819
PspLI CGTACG 1 cut(s) 72
PspN4I GGNNCC 9 cut(s) 380, 476, 477, 646, 1193, 1383, 1832, 1833, 1876
PspPI GGNCC 9 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831, 1930
PspPPI RGGWCCY 3 cut(s) 379, 475, 1831
PstI CTGCAG 1 cut(s) 387
PstNI CAGNNNCTG 1 cut(s) 238
PsyI GACNNNGTC 3 cut(s) 834, 887, 1423
RseI CAYNNNNRTG 3 cut(s) 879, 1244, 1818
SalI GTCGAC 1 cut(s) 1920
SaqAI TTAA 4 cut(s) 419, 1560, 1866, 1962
SatI GCNGC 2 cut(s) 97, 1369
Sau3AI GATC 6 cut(s) 771, 816, 1204, 1211, 1309, 1386
Sau96I GGNCC 9 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831, 1930
SchI GAGTC 2 cut(s) 97, 1490
ScrFI CCNGG 6 cut(s) 821, 1156, 1229, 1584, 1606, 1879
SfaNI GCATC 5 cut(s) 421, 1076, 1086, 1559, 1694
SfcI CTRYAG 2 cut(s) 303, 383
SinI GGWCC 8 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831
SmiMI CAYNNNNRTG 3 cut(s) 879, 1244, 1818
SnaBI TACGTA 1 cut(s) 72
Sse9I AATT 9 cut(s) 393, 457, 481, 666, 792, 1105, 1671, 1978, 2047
SsiI CCGC 8 cut(s) 158, 165, 195, 260, 1034, 1116, 1368, 1411
SspMI CTAG 1 cut(s) 135
StyD4I CCNGG 6 cut(s) 819, 1154, 1227, 1582, 1604, 1877
TaaI ACNGT 9 cut(s) 145, 155, 549, 953, 1363, 1423, 1646, 1903, 2118
TaiI ACGT 2 cut(s) 74, 2115
TaqI TCGA 2 cut(s) 591, 1921
TaqII GACCGA 1 cut(s) 1191
TasI AATT 9 cut(s) 393, 457, 481, 666, 792, 1105, 1671, 1978, 2047
TatI WGTACW 2 cut(s) 150, 1233
TauI GCSGC 1 cut(s) 1371
TfiI GAWTC 4 cut(s) 366, 1186, 1447, 1784
Tru1I TTAA 4 cut(s) 419, 1560, 1866, 1962
Tru9I TTAA 4 cut(s) 419, 1560, 1866, 1962
TscAI CASTG 3 cut(s) 45, 505, 781
TseFI GTSAC 5 cut(s) 445, 776, 889, 1127, 1903
TseI GCWGC 1 cut(s) 96
Tsp45I GTSAC 5 cut(s) 445, 776, 889, 1127, 1903
TspDTI ATGAA 6 cut(s) 358, 470, 761, 989, 1008, 1535
TspGWI ACGGA 2 cut(s) 716, 1485
TspRI CASTG 3 cut(s) 45, 505, 781
Tth111I GACNNNGTC 3 cut(s) 834, 887, 1423
Van91I CCANNNNNTGG 3 cut(s) 211, 271, 1457
VpaK11BI GGWCC 8 cut(s) 243, 262, 379, 475, 1192, 1419, 1572, 1831
VspI ATTAAT 1 cut(s) 419
XapI RAATTY 5 cut(s) 393, 457, 481, 1105, 1978
XceI RCATGY 2 cut(s) 1012, 1249
XcmI CCANNNNNNNNNTGG 1 cut(s) 212
XmiI GTMKAC 1 cut(s) 1921
XspI CTAG 1 cut(s) 135
Zsp2I ATGCAT 1 cut(s) 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.