AT1G06740

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000251
Physical Location & Seq
Forward (+)
2070737 .. 2073374
2638 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G06740.1

Sequence Viewer

Length: 2181 bp
ATGGCAAACGACGAGCTTGTGAAGTCTGAGAACCGTGATATCTCGTTTAGACAAGATCATTTCACGGGTAGTCGACACAACTATGAACTCTTCGTTGGTCATGACTACAATTCCGCCTTCGAACAACTTCTCGATATCAACCTCCAGATTGGTGCCTCCTGTAACGGAAATGAGCTCTGGAACAACCTCCAGGACCACAGAGGGATCGATGAAACGAAAGAAGTGGCATGTTTAGATGTTAACCAAAATGACGGCTATCGCTCCTTTCCTGATAATGATGACTCTGAGATTGATAAATCAACTGTTATTGAAGCCACGGGCGCTATCCATAAGGTAGAGTCTCAAGATACCGATGATAAATTAGAGTTGGAGATGAGTCAAAGCACCGAGTTTTCTCAGAAATCAGTCATGCCTTCTCCTAGCTCTCAATGCTGGTCCATGTCCGGTGCTGGTACTGACCATGAAATGGTCGTTGGTATGGAATTTTCTGATGCCTATGCTTGTAGGAGAGCGATTAAAAATGCAGCAATTTCTCTGCGTTTTGAGATGCGAACGATTAAATCTGACAAGACTCGCTTCACAGCAAAGTGCAACAGCAAGGGTTGCCCATGGAGGATTCACTGCGCCAAAGTTTCTAATGCTCCAACTTTTACGATAAGGACTATTCACGGGAGTCATACTTGTGGTGGGATTTCGCATCTTGGTCATCAGCAAGCTTCAGTCCAGTGGGTTGCTGATGTTGTTGCTGAAAAGCTGAAAGAAAATCCTCATTTCAAACCAAAGGAGATACTAGAGGAGATTTATCGAGTTCATGGTATTTCACTGTCCTACAAGCAGGCATGGAGGGGGAAAGAGCGCATAATGGCTACTCTTCGCGGGTCTACTCTTCGTGGGTCATTTGAAGAAGAATATCGCCTTCTTCCCCAATACTGTGATGAAATCAGAAGGTCTAATCCTGGGAGCGTCGCTGTGGTTCATGTGAATCCCATTGATGGGTGCTTTCAACACTTGTTTATTTCTTTCCAAGCATCAATCTCTGGTTTTTTAAATGCTTGCCGGCCTCTTATTGCACTGGACAGTACAGTTTTAAAGAGCAAATATCCAGGGACGTTGCTGCTTGCCACTGGATTTGATGGAGATGGAGCTGTGTTTCCTTTGGCATTCGCTATTGTTAACGAAGAGAACGATGACAACTGGCATCGGTTTCTCTCCGAGCTTCGTAAGATTCTAGATGAGAATATGCCAAAGCTTACCATATTGTCCAGCGGAGAGAGACCCGTTGTTGATGGGGTAGAGGCTAATTTCCCAGCAGCATTTCATGGCTTTTGTCTCCATTATCTCACAGAACGATTCCAAAGAGAATTCCAAAGCTCTGTTCTTGTAGACCTTTTTTGGGAGGCTGCGCATTGTCTCACAGTTCTCGAGTTCAAATCAAAAATCAACAAGATCGAGCAGATATCCCCGGAAGCTTCGTTATGGATCCAAAACAAGTCTCCTGCTCGATGGGCATCATCATACTTTGAAGGAACAAGGTTTGGACAATTAACTGCAAATGTTATTACCGAGTCACTCAGCAATTGGGTTGAAGATACCTCAGGTCTTCCTATAATCCAAACGATGGAGTGTATCCACCGCCATTTGATAAATATGTTGAAAGAACGCCGTGAAACAAGCTTGCATTGGTCTAATGTGCTTGTTCCTTCTGCTGAGAAACAAATGCTTGCTGCTATAGAACAATCTCGTGCTCACCGAGTTTACAGAGCAAACGAAGCAGAATTTGAAGTCATGACTTGTGAAGGAAACGTCGTTGTAAATATCGAAAACTGTTCTTGTTTATGCGGCCGGTGGCAGGTTTATGGTTTGCCCTGTAGCCACGCCGTTGGAGCTCTCTTGTCTTGCGAAGAGGACGTTTATAGATACACAGAGAGTTGTTTCACAGTGGAGAATTACAGAAGAGCTTATGCAGAAACTCTAGAGCCAATATCAGACAAAGTTCAGTGGAAAGAAAATGATTCAGAGAGAGACAGTGAAAATGTAATAAAAACACCAAAGGCTATGAAAGGTGCTCCGAGGAAGAGGAGAGTAAGGGCAGAGGATCGTGACCGTGTGAGGCGTGTGGTTCATTGTGGTCGGTGTAATCAGACAGGCCATTTCAGAACAACTTGCACTGCTCCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

726

Amino Acids

82.36

Weight (kDa)

5.98

Isoelectric Point (pI)

48.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 154 - 219 3.3e-22 MuDR family transposase
MULE PF10551 356 - 448 5.3e-12 MULE transposase domain
SWIM PF04434 603 - 633 1.7e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1404
Acc36I ACCTGC 1 cut(s) 1840
AccB1I GGYRCC 1 cut(s) 152
AccB7I CCANNNNNTGG 2 cut(s) 466, 1618
AccI GTMKAC 3 cut(s) 73, 881, 1383
AccII CGCG 1 cut(s) 876
AciI CCGC 5 cut(s) 114, 876, 1266, 1633, 1839
AclWI GGATC 4 cut(s) 212, 1474, 1487, 2103
AcoI YGGCCR 1 cut(s) 1840
AcsI RAATTY 3 cut(s) 482, 1361, 1775
AcuI CTGAAG 1 cut(s) 702
AfaI GTAC 2 cut(s) 454, 1081
AfiI CCNNNNNNNGG 6 cut(s) 466, 992, 993, 1393, 1618, 1849
AgsI TTSAA 9 cut(s) 311, 775, 902, 1004, 1429, 1523, 1586, 1654, 1781
AjnI CCWGG 3 cut(s) 189, 955, 1102
AjuI GAANNNNNNNTTGG 6 cut(s) 78, 110, 456, 488, 1359, 1391
Alw21I GWGCWC 4 cut(s) 177, 1747, 1888, 2068
Alw26I GTCTC 6 cut(s) 345, 1267, 1334, 1415, 1497, 2016
AlwI GGATC 4 cut(s) 212, 1474, 1487, 2103
Ama87I CYCGRG 1 cut(s) 1421
AoxI GGCC 3 cut(s) 1058, 1840, 2146
ApeKI GCWGC 5 cut(s) 524, 1114, 1310, 1400, 1724
ApoI RAATTY 3 cut(s) 482, 1361, 1775
Asp700I GAANNNNTTC 1 cut(s) 126
AspLEI GCGC 4 cut(s) 323, 626, 858, 1405
AspS9I GGNCC 2 cut(s) 193, 435
AsuC2I CCSGG 1 cut(s) 1463
AsuHPI GGTGA 1 cut(s) 1739
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 1421
AvaII GGWCC 2 cut(s) 193, 435
AxyI CCTNAGG 1 cut(s) 1594
BamHI GGATCC 1 cut(s) 1479
BanI GGYRCC 1 cut(s) 152
BanII GRGCYC 2 cut(s) 177, 1888
BauI CACGAG 1 cut(s) 1740
BbsI GAAGAC 1 cut(s) 1592
Bbv12I GWGCWC 4 cut(s) 177, 1747, 1888, 2068
BbvI GCAGC 5 cut(s) 536, 1101, 1322, 1387, 1711
BccI CCATC 6 cut(s) 986, 1127, 1133, 1280, 1497, 1612
BceAI ACGGC 3 cut(s) 268, 1647, 1862
BciT130I CCWGG 3 cut(s) 191, 957, 1104
BciVI GTATCC 1 cut(s) 1637
BcnI CCSGG 1 cut(s) 1463
BcoDI GTCTC 6 cut(s) 345, 1267, 1334, 1415, 1497, 2016
BfaI CTAG 4 cut(s) 420, 791, 1229, 1973
BfmI CTRYAG 2 cut(s) 1728, 1867
BfoI RGCGCY 1 cut(s) 324
BfuAI ACCTGC 1 cut(s) 1840
BfuI GTATCC 1 cut(s) 1637
BisI GCNGC 6 cut(s) 525, 1115, 1311, 1401, 1725, 1840
BlsI GCNGC 6 cut(s) 526, 1116, 1312, 1402, 1726, 1841
Bme1390I CCNGG 4 cut(s) 191, 957, 1104, 1463
Bme18I GGWCC 2 cut(s) 193, 435
BmeT110I CYCGRG 1 cut(s) 1421
BmgT120I GGNCC 2 cut(s) 193, 435
BmiI GGNNCC 2 cut(s) 154, 1481
BmrFI CCNGG 4 cut(s) 191, 957, 1104, 1463
BmsI GCATC 6 cut(s) 481, 537, 706, 1037, 1207, 1517
BpiI GAAGAC 1 cut(s) 1592
BpmI CTGGAG 2 cut(s) 128, 173
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 1 cut(s) 327
BpuMI CCSGG 1 cut(s) 1463
Bsa29I ATCGAT 1 cut(s) 207
BsaBI GATNNNNATC 1 cut(s) 1507
BsaI GGTCTC 1 cut(s) 1267
BsaJI CCNNGG 6 cut(s) 315, 608, 956, 1103, 1461, 2069
BsaWI WCCGGW 1 cut(s) 443
Bsc4I CCNNNNNNNGG 6 cut(s) 466, 992, 993, 1393, 1618, 1849
Bse118I RCCGGY 2 cut(s) 1056, 1842
Bse1I ACTGG 4 cut(s) 724, 1077, 1129, 1199
Bse21I CCTNAGG 1 cut(s) 1594
Bse8I GATNNNNATC 1 cut(s) 1507
BseBI CCWGG 3 cut(s) 191, 957, 1104
BseCI ATCGAT 1 cut(s) 207
BseDI CCNNGG 6 cut(s) 315, 608, 956, 1103, 1461, 2069
BseJI GATNNNNATC 1 cut(s) 1507
BseLI CCNNNNNNNGG 6 cut(s) 466, 992, 993, 1393, 1618, 1849
BseMII CTCAG 6 cut(s) 18, 276, 410, 1585, 1608, 1698
BseNI ACTGG 4 cut(s) 724, 1077, 1129, 1199
BseRI GAGGAG 2 cut(s) 809, 2092
BseX3I CGGCCG 1 cut(s) 1840
BseXI GCAGC 5 cut(s) 536, 1101, 1322, 1387, 1711
BseYI CCCAGC 1 cut(s) 1306
Bsh1236I CGCG 1 cut(s) 876
Bsh1285I CGRYCG 1 cut(s) 1843
BshFI GGCC 3 cut(s) 1060, 1842, 2148
BshNI GGYRCC 1 cut(s) 152
BshVI ATCGAT 1 cut(s) 207
BsiEI CGRYCG 1 cut(s) 1843
BsiHKAI GWGCWC 4 cut(s) 177, 1747, 1888, 2068
BsiHKCI CYCGRG 1 cut(s) 1421
BsiSI CCGG 4 cut(s) 444, 1057, 1463, 1843
BslFI GGGAC 1 cut(s) 1120
BslI CCNNNNNNNGG 6 cut(s) 466, 992, 993, 1393, 1618, 1849
BsmAI GTCTC 6 cut(s) 345, 1267, 1334, 1415, 1497, 2016
BsmFI GGGAC 1 cut(s) 1120
BsmI GAATGC 1 cut(s) 1160
BsnI GGCC 3 cut(s) 1060, 1842, 2148
Bso31I GGTCTC 1 cut(s) 1267
BsoBI CYCGRG 1 cut(s) 1421
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 4 cut(s) 177, 1747, 1888, 2068
Bsp143I GATC 5 cut(s) 55, 204, 1446, 1479, 2095
Bsp19I CCATGG 1 cut(s) 608
BspACI CCGC 5 cut(s) 114, 876, 1266, 1633, 1839
BspANI GGCC 3 cut(s) 1060, 1842, 2148
BspCNI CTCAG 6 cut(s) 19, 277, 409, 1584, 1607, 1699
BspDI ATCGAT 1 cut(s) 207
BspFNI CGCG 1 cut(s) 876
BspHI TCATGA 2 cut(s) 100, 1785
BspLI GGNNCC 2 cut(s) 154, 1481
BspMI ACCTGC 1 cut(s) 1840
BspPI GGATC 4 cut(s) 212, 1474, 1487, 2103
BspQI GCTCTTC 1 cut(s) 1948
BspT104I TTCGAA 1 cut(s) 120
BspT107I GGYRCC 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 1267
BsrFI RCCGGY 2 cut(s) 1056, 1842
BsrI ACTGG 4 cut(s) 724, 1077, 1129, 1199
BssAI RCCGGY 2 cut(s) 1056, 1842
BssECI CCNNGG 6 cut(s) 315, 608, 956, 1103, 1461, 2069
BssMI GATC 5 cut(s) 55, 204, 1446, 1479, 2095
BssSI CACGAG 1 cut(s) 1740
BssT1I CCWWGG 1 cut(s) 608
Bst2BI CACGAG 1 cut(s) 1740
Bst2UI CCWGG 3 cut(s) 191, 957, 1104
Bst6I CTCTTC 7 cut(s) 95, 876, 891, 1173, 1896, 1948, 2069
BstAPI GCANNNNNTGC 1 cut(s) 603
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 7 cut(s) 714, 837, 1054, 1058, 1119, 1676, 1722
BstDEI CTNAG 6 cut(s) 27, 285, 396, 1571, 1594, 1707
BstDSI CCRYGG 2 cut(s) 315, 608
BstFNI CGCG 1 cut(s) 876
BstH2I RGCGCY 1 cut(s) 324
BstHHI GCGC 4 cut(s) 323, 626, 858, 1405
BstKTI GATC 5 cut(s) 58, 207, 1449, 1482, 2098
BstMAI GTCTC 6 cut(s) 345, 1267, 1334, 1415, 1497, 2016
BstMBI GATC 5 cut(s) 55, 204, 1446, 1479, 2095
BstMCI CGRYCG 1 cut(s) 1843
BstMWI GCNNNNNNNGC 6 cut(s) 320, 429, 603, 1505, 1769, 1883
BstNI CCWGG 3 cut(s) 191, 957, 1104
BstNSI RCATGY 1 cut(s) 231
BstSCI CCNGG 4 cut(s) 189, 955, 1102, 1461
BstSFI CTRYAG 2 cut(s) 1728, 1867
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 5 cut(s) 536, 1101, 1322, 1387, 1711
BstV2I GAAGAC 1 cut(s) 1592
BstX2I RGATCY 1 cut(s) 1479
BstXI CCANNNNNNTGG 1 cut(s) 1880
BstYI RGATCY 1 cut(s) 1479
BstZI CGGCCG 1 cut(s) 1840
Bsu15I ATCGAT 1 cut(s) 207
Bsu36I CCTNAGG 1 cut(s) 1594
BsuI GTATCC 1 cut(s) 1637
BsuRI GGCC 3 cut(s) 1060, 1842, 2148
BsuTUI ATCGAT 1 cut(s) 207
BtgI CCRYGG 2 cut(s) 315, 608
BtsI GCAGTG 2 cut(s) 619, 2166
BtsIMutI CAGTG 9 cut(s) 619, 731, 821, 1070, 1122, 1944, 2003, 2032, 2166
BveI ACCTGC 1 cut(s) 1840
Cac8I GCNNGC 7 cut(s) 714, 837, 1054, 1058, 1119, 1676, 1722
CciI TCATGA 2 cut(s) 100, 1785
CfoI GCGC 4 cut(s) 323, 626, 858, 1405
Cfr10I RCCGGY 2 cut(s) 1056, 1842
Cfr13I GGNCC 2 cut(s) 193, 435
ClaI ATCGAT 1 cut(s) 207
CseI GACGC 1 cut(s) 952
Csp6I GTAC 2 cut(s) 453, 1080
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CviQI GTAC 2 cut(s) 453, 1080
DdeI CTNAG 6 cut(s) 27, 285, 396, 1571, 1594, 1707
DpnI GATC 5 cut(s) 57, 206, 1448, 1481, 2097
DpnII GATC 5 cut(s) 55, 204, 1446, 1479, 2095
DraI TTTAAA 2 cut(s) 1047, 1089
EaeI YGGCCR 1 cut(s) 1840
EagI CGGCCG 1 cut(s) 1840
Eam1104I CTCTTC 7 cut(s) 95, 876, 891, 1173, 1896, 1948, 2069
EarI CTCTTC 7 cut(s) 95, 876, 891, 1173, 1896, 1948, 2069
EciI GGCGGA 1 cut(s) 103
Ecl136II GAGCTC 2 cut(s) 175, 1886
EclXI CGGCCG 1 cut(s) 1840
Eco130I CCWWGG 1 cut(s) 608
Eco24I GRGCYC 2 cut(s) 177, 1888
Eco31I GGTCTC 1 cut(s) 1267
Eco32I GATATC 3 cut(s) 40, 136, 1458
Eco47I GGWCC 2 cut(s) 193, 435
Eco52I CGGCCG 1 cut(s) 1840
Eco53kI GAGCTC 2 cut(s) 175, 1886
Eco57I CTGAAG 1 cut(s) 702
Eco81I CCTNAGG 1 cut(s) 1594
Eco88I CYCGRG 1 cut(s) 1421
EcoICRI GAGCTC 2 cut(s) 175, 1886
EcoRI GAATTC 1 cut(s) 1361
EcoRII CCWGG 3 cut(s) 189, 955, 1102
EcoRV GATATC 3 cut(s) 40, 136, 1458
EcoT14I CCWWGG 1 cut(s) 608
EcoT38I GRGCYC 2 cut(s) 177, 1888
ErhI CCWWGG 1 cut(s) 608
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FaqI GGGAC 1 cut(s) 1120
FauI CCCGC 1 cut(s) 869
FblI GTMKAC 3 cut(s) 73, 881, 1383
Fnu4HI GCNGC 6 cut(s) 525, 1115, 1311, 1401, 1725, 1840
FriOI GRGCYC 2 cut(s) 177, 1888
Fsp4HI GCNGC 6 cut(s) 525, 1115, 1311, 1401, 1725, 1840
FspBI CTAG 4 cut(s) 420, 791, 1229, 1973
FspI TGCGCA 1 cut(s) 1404
GlaI GCGC 4 cut(s) 322, 625, 857, 1404
GluI GCNGC 6 cut(s) 525, 1115, 1311, 1401, 1725, 1840
GsaI CCCAGC 1 cut(s) 1310
GsuI CTGGAG 2 cut(s) 128, 173
HaeII RGCGCY 1 cut(s) 324
HaeIII GGCC 3 cut(s) 1060, 1842, 2148
HapII CCGG 4 cut(s) 444, 1057, 1463, 1843
HgaI GACGC 1 cut(s) 952
HhaI GCGC 4 cut(s) 323, 626, 858, 1405
Hin6I GCGC 4 cut(s) 321, 624, 856, 1403
HinP1I GCGC 4 cut(s) 321, 624, 856, 1403
HincII GTYRAC 3 cut(s) 74, 241, 1174
HindII GTYRAC 3 cut(s) 74, 241, 1174
HindIII AAGCTT 4 cut(s) 714, 1247, 1467, 1672
HpaI GTTAAC 2 cut(s) 241, 1174
HpaII CCGG 4 cut(s) 444, 1057, 1463, 1843
HphI GGTGA 1 cut(s) 1739
Hpy166II GTNNAC 6 cut(s) 74, 241, 882, 1174, 1384, 1756
Hpy8I GTNNAC 6 cut(s) 74, 241, 882, 1174, 1384, 1756
Hpy99I CGWCG 3 cut(s) 14, 968, 1808
HpyAV CCTTC 7 cut(s) 127, 423, 926, 939, 1517, 1710, 1790
HpyCH4IV ACGT 3 cut(s) 1109, 1803, 1908
HpyCH4V TGCA 7 cut(s) 524, 591, 1070, 1550, 1678, 1964, 2166
HpyF10VI GCNNNNNNNGC 6 cut(s) 320, 429, 603, 1505, 1769, 1883
HpyF3I CTNAG 6 cut(s) 27, 285, 396, 1571, 1594, 1707
HpySE526I ACGT 3 cut(s) 1109, 1803, 1908
HspAI GCGC 4 cut(s) 321, 624, 856, 1403
KroI GCCGGC 1 cut(s) 1056
KroNI GCCGGC 1 cut(s) 1058
KspAI GTTAAC 2 cut(s) 241, 1174
Kzo9I GATC 5 cut(s) 55, 204, 1446, 1479, 2095
LguI GCTCTTC 1 cut(s) 1948
LmnI GCTCC 7 cut(s) 266, 646, 960, 1142, 1883, 2071, 2176
Lsp1109I GCAGC 5 cut(s) 536, 1101, 1322, 1387, 1711
LweI GCATC 6 cut(s) 481, 537, 706, 1037, 1207, 1517
MaeI CTAG 4 cut(s) 420, 791, 1229, 1973
MaeII ACGT 3 cut(s) 1109, 1803, 1908
MaeIII GTNAC 3 cut(s) 161, 1566, 2099
MalI GATC 5 cut(s) 57, 206, 1448, 1481, 2097
MboI GATC 5 cut(s) 55, 204, 1446, 1479, 2095
MfeI CAATTG 1 cut(s) 1576
MflI RGATCY 1 cut(s) 1479
MhlI GDGCHC 4 cut(s) 177, 1747, 1888, 2068
MlyI GAGTC 6 cut(s) 275, 347, 385, 565, 682, 1574
MmeI TCCRAC 3 cut(s) 348, 668, 1861
MroNI GCCGGC 1 cut(s) 1056
MroXI GAANNNNTTC 1 cut(s) 126
MseI TTAA 7 cut(s) 240, 516, 558, 1046, 1088, 1173, 1544
MslI CAYNNNNRTG 2 cut(s) 81, 681
MspA1I CMGCKG 1 cut(s) 1266
MspI CCGG 4 cut(s) 444, 1057, 1463, 1843
MspR9I CCNGG 4 cut(s) 191, 957, 1104, 1463
MunI CAATTG 1 cut(s) 1576
Mva1269I GAATGC 1 cut(s) 1160
MvaI CCWGG 3 cut(s) 191, 957, 1104
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 6 cut(s) 320, 429, 603, 1505, 1769, 1883
NaeI GCCGGC 1 cut(s) 1058
NciI CCSGG 1 cut(s) 1463
NcoI CCATGG 1 cut(s) 608
NdeII GATC 5 cut(s) 55, 204, 1446, 1479, 2095
NgoMIV GCCGGC 1 cut(s) 1056
NlaIV GGNNCC 2 cut(s) 154, 1481
NmuCI GTSAC 2 cut(s) 1566, 2099
NsbI TGCGCA 1 cut(s) 1404
NspI RCATGY 1 cut(s) 231
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 1421
PagI TCATGA 2 cut(s) 100, 1785
PciSI GCTCTTC 1 cut(s) 1948
PcsI WCGNNNNNNNCGW 2 cut(s) 1182, 1747
PctI GAATGC 1 cut(s) 1160
PdiI GCCGGC 1 cut(s) 1058
PdmI GAANNNNTTC 1 cut(s) 126
PfeI GAWTC 5 cut(s) 616, 982, 1225, 1350, 2012
PflMI CCANNNNNTGG 2 cut(s) 466, 1618
PfoI TCCNGGA 1 cut(s) 189
PkrI GCNGC 6 cut(s) 526, 1116, 1312, 1402, 1726, 1841
PleI GAGTC 6 cut(s) 275, 346, 384, 565, 681, 1573
PpsI GAGTC 6 cut(s) 275, 346, 384, 565, 681, 1573
Psp124BI GAGCTC 2 cut(s) 177, 1888
Psp6I CCWGG 3 cut(s) 189, 955, 1102
PspFI CCCAGC 1 cut(s) 1306
PspGI CCWGG 3 cut(s) 189, 955, 1102
PspN4I GGNNCC 2 cut(s) 154, 1481
PspPI GGNCC 2 cut(s) 193, 435
PsuI RGATCY 1 cut(s) 1479
RsaI GTAC 2 cut(s) 454, 1081
RsaNI GTAC 2 cut(s) 453, 1080
RseI CAYNNNNRTG 2 cut(s) 81, 681
SacI GAGCTC 2 cut(s) 177, 1888
SalI GTCGAC 1 cut(s) 72
SapI GCTCTTC 1 cut(s) 1948
SaqAI TTAA 7 cut(s) 240, 516, 558, 1046, 1088, 1173, 1544
SatI GCNGC 6 cut(s) 525, 1115, 1311, 1401, 1725, 1840
Sau3AI GATC 5 cut(s) 55, 204, 1446, 1479, 2095
Sau96I GGNCC 2 cut(s) 193, 435
SchI GAGTC 6 cut(s) 275, 347, 385, 565, 682, 1574
ScrFI CCNGG 4 cut(s) 191, 957, 1104, 1463
SduI GDGCHC 4 cut(s) 177, 1747, 1888, 2068
SfaNI GCATC 6 cut(s) 481, 537, 706, 1037, 1207, 1517
SfcI CTRYAG 2 cut(s) 1728, 1867
Sfr274I CTCGAG 1 cut(s) 1421
SfuI TTCGAA 1 cut(s) 120
SinI GGWCC 2 cut(s) 193, 435
SlaI CTCGAG 1 cut(s) 1421
SmiMI CAYNNNNRTG 2 cut(s) 81, 681
SmlI CTYRAG 2 cut(s) 342, 1421
SmoI CTYRAG 2 cut(s) 342, 1421
SsiI CCGC 5 cut(s) 114, 876, 1266, 1633, 1839
SspMI CTAG 4 cut(s) 420, 791, 1229, 1973
SstI GAGCTC 2 cut(s) 177, 1888
StyD4I CCNGG 4 cut(s) 189, 955, 1102, 1461
StyI CCWWGG 1 cut(s) 608
TaiI ACGT 3 cut(s) 1112, 1806, 1911
TaqI TCGA 9 cut(s) 73, 120, 132, 207, 805, 1422, 1449, 1501, 1818
TatI WGTACW 1 cut(s) 1079
TauI GCSGC 1 cut(s) 1842
TfiI GAWTC 5 cut(s) 616, 982, 1225, 1350, 2012
Tru1I TTAA 7 cut(s) 240, 516, 558, 1046, 1088, 1173, 1544
Tru9I TTAA 7 cut(s) 240, 516, 558, 1046, 1088, 1173, 1544
TscAI CASTG 9 cut(s) 626, 731, 828, 1077, 1129, 1944, 2003, 2032, 2173
TseFI GTSAC 2 cut(s) 1566, 2099
TseI GCWGC 5 cut(s) 524, 1114, 1310, 1400, 1724
Tsp45I GTSAC 2 cut(s) 1566, 2099
TspDTI ATGAA 9 cut(s) 99, 225, 477, 800, 951, 965, 1307, 2072, 2111
TspGWI ACGGA 1 cut(s) 180
TspRI CASTG 9 cut(s) 626, 731, 828, 1077, 1129, 1944, 2003, 2032, 2173
Van91I CCANNNNNTGG 2 cut(s) 466, 1618
VpaK11BI GGWCC 2 cut(s) 193, 435
XapI RAATTY 3 cut(s) 482, 1361, 1775
XbaI TCTAGA 2 cut(s) 1228, 1972
XceI RCATGY 1 cut(s) 231
XhoI CTCGAG 1 cut(s) 1421
XmiI GTMKAC 3 cut(s) 73, 881, 1383
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 4 cut(s) 420, 791, 1229, 1973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.