Rw7G000280

plant mutator transposase zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000251
Physical Location & Seq
Reverse (-)
253983 .. 255725
1743 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G000280.1

Sequence Viewer

Length: 1743 bp
ATGGAGGAGGAGACATTTTTTGTTGGTCAAGAGTTCCCTGATGTAAAAGCGTTTAGGAATGCGATTAAAGAAGCTGCAATTGCCCAACACTTCGAGGTTCGTATAATAAAAAGTGACCTTATCCGGTACTTTGCAAAGTGTGCAGCGGAGGCTTGTCCTTGGCTTATTCGTGCTGTTAAGCTTCCTAATGCGCCGACATTTGCGATAAGAAGCCTTGAAGGGAAGCACACTTGCGGTAGAAATGCGCACAACGGGCACCATCAGGCGTCTATTGATTGGATTGTTAGTTTTATAGAACAACGCCTGCGGGATAACATTAATTACAAGCCGAAGGATATATTGCATGATATCCATCAGCAGTATGGGATTACCATACCTTATAAGCAGGCTTGGCGTGCAAAGGAACGGGGACTTGCTGCGATATATGGATCTTCCGAGGAAGGGTATTGCCTTCTTCCTTCATACTGTGAAGAAATAAAGAAGACCAACCCTGGAAGCATTGCTGAGGTGTTTACTACTGGTCCAGATCACCGGTTCCAGCGGTTATTTGTTTCCTTTTATTCATCCATTTATGGTTTTCTAAATGGTTGCTTGCCTGTTATTGGGCTTGGTGGAATCCATCTTAAGAGCAAATATCTCGGCACCTTACTCTCTGCAACTTCTTTTGATGCTGAAGGGGGTTTATTTCCACTTGCATTTGGTGTTGTTGATGAAGAAAATGATGAGAGCTGGATGTGGTTCGTGTCAGAGTTGCACAAGGCACTAGAGATGAACACCCAAAATATGCCACAGCTCACATTTATATCTGATACACAGAAGGGCATTGCAGACGCTGTGAGAAGGAAATTCCCAAATTCTGTACATGATATTTGCATTCGCCACTTGAGTGAAAGCATTGGAAAAGAATTCAAGAACCCAAGGCTTGTTCATCTGTTATGGAAAGCTGCACAAGCCACTACTACGAGTGGTTTCAAAGAAAAAATGGCTGAAATAGAGGAGGTTTCTTTAGATGCTGCAAAATGGCTGCAACAATTTCATCCTTCCCGCTGGGCATTTGTGTATTTTGAAGGAACACATTATGGTCATTTCTCATCAAATATTGAGGAGTTCAATAAATGGATTCTGGAAGCTCGTGAATTGCCCATAATCCAGGTGATTGAAAGGATTCATGGTAAATTGATGACGGAGTTTGAAGAACGGCGTAAGCAAAGTAATTCTTGGTTTTCCTTACTTGCTCCATCTGCTGAGAACTATATTTTAGAAGCCATCAGCCGTGCATCCACATATCAGGTCCTTAGATCTGATCAAGTTGAATTTGAGGTCCTCTCAGCTGATCGATCAGACATAGTGAATATTGGAACCCATTGTTGTTCCTGCCGCGAATGGCAGCTATATGGTTTACCATGTTCCCATGCTGTTGCTGCCCTCATCTCATGTCAGAAAGATGTATATGCCTTTACAGAGAAATGTTTTACTGCAGCAAGTTACCGTGAGACGTATGCTGGAGAGATATATCCCATTGAAGCAAAACCCCGATGGGTTAAGACAGAAGAGGCTGCAATGACTGATGATGATGATGATAATCGAGTTTTTGTGCGACCTCCTAAGATTCGTAGGCTGCCAGGGCGCCCCGAAAAGAAACGGGTTTGTGTAGAAGACATTAATCCTGGCAAACATACTGTACGTTGCAGTCTCTGTAATCAGACCGGACATTATAAGACAACCTGCAAAGAGAGATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

580

Amino Acids

66.41

Weight (kDa)

6.73

Isoelectric Point (pI)

46.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 6 - 69 1.3e-21 MuDR family transposase
MULE PF10551 201 - 296 7.6e-19 MULE transposase domain
SWIM PF04434 450 - 479 1.5e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 1716
Acc16I TGCGCA 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 1733
AccB1I GGYRCC 3 cut(s) 255, 641, 1626
AccII CGCG 1 cut(s) 1380
AciI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
AclWI GGATC 1 cut(s) 436
AcsI RAATTY 4 cut(s) 845, 853, 905, 1313
AcuI CTGAAG 1 cut(s) 693
AcyI GRCGYC 2 cut(s) 266, 1627
AfaI GTAC 3 cut(s) 128, 861, 1683
AfiI CCNNNNNNNGG 2 cut(s) 441, 602
AflII CTTAAG 1 cut(s) 623
AgeI ACCGGT 1 cut(s) 531
AgsI TTSAA 9 cut(s) 218, 910, 973, 1067, 1111, 1160, 1193, 1313, 1523
AjnI CCWGG 4 cut(s) 490, 1149, 1621, 1666
AleI CACNNNNGTG 1 cut(s) 885
AluBI AGCT 8 cut(s) 74, 181, 729, 793, 944, 1130, 1331, 1390
AluI AGCT 8 cut(s) 74, 181, 729, 793, 944, 1130, 1331, 1390
Alw26I GTCTC 3 cut(s) 5, 1487, 1697
AlwI GGATC 1 cut(s) 436
AlwNI CAGNNNCTG 2 cut(s) 833, 1695
ApoI RAATTY 4 cut(s) 845, 853, 905, 1313
AseI ATTAAT 2 cut(s) 318, 1662
AsiGI ACCGGT 1 cut(s) 531
Asp700I GAANNNNTTC 1 cut(s) 1164
AspLEI GCGC 3 cut(s) 193, 247, 1629
AspS9I GGNCC 3 cut(s) 521, 1291, 1321
AsuHPI GGTGA 2 cut(s) 521, 1165
AvaII GGWCC 3 cut(s) 521, 1291, 1321
BaeGI GKGCMC 1 cut(s) 258
BanI GGYRCC 3 cut(s) 255, 641, 1626
BauI CACGAG 1 cut(s) 1131
BbsI GAAGAC 2 cut(s) 488, 1662
BbvCI CCTCAGC 1 cut(s) 504
BccI CCATC 6 cut(s) 267, 360, 627, 1246, 1274, 1530
BceAI ACGGC 2 cut(s) 1214, 1257
BcgI CGANNNNNNTGC 2 cut(s) 619, 653
BciT130I CCWGG 4 cut(s) 492, 1151, 1623, 1668
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 3 cut(s) 5, 1487, 1697
BfaI CTAG 1 cut(s) 764
BfmI CTRYAG 1 cut(s) 1476
BfoI RGCGCY 1 cut(s) 1630
BfrI CTTAAG 1 cut(s) 623
BfuAI ACCTGC 1 cut(s) 1733
BglII AGATCT 1 cut(s) 1298
Bme1390I CCNGG 4 cut(s) 492, 1151, 1623, 1668
Bme18I GGWCC 3 cut(s) 521, 1291, 1321
BmgT120I GGNCC 3 cut(s) 521, 1291, 1321
BmiI GGNNCC 5 cut(s) 257, 536, 643, 1360, 1628
BmrFI CCNGG 4 cut(s) 492, 1151, 1623, 1668
BmsI GCATC 3 cut(s) 658, 1000, 1286
BpiI GAAGAC 2 cut(s) 488, 1662
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpmI CTGGAG 1 cut(s) 1524
Bpu10I CCTNAGC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 904
Bsa29I ATCGAT 1 cut(s) 1336
BsaBI GATNNNNATC 2 cut(s) 351, 1581
BsaHI GRCGYC 2 cut(s) 266, 1627
BsaJI CCNNGG 5 cut(s) 158, 435, 490, 917, 1622
BsaWI WCCGGW 3 cut(s) 123, 531, 1706
Bsc4I CCNNNNNNNGG 2 cut(s) 441, 602
Bse118I RCCGGY 1 cut(s) 531
Bse1I ACTGG 1 cut(s) 523
Bse3DI GCAATG 3 cut(s) 498, 822, 1566
Bse8I GATNNNNATC 2 cut(s) 351, 1581
BseBI CCWGG 4 cut(s) 492, 1151, 1623, 1668
BseCI ATCGAT 1 cut(s) 1336
BseDI CCNNGG 5 cut(s) 158, 435, 490, 917, 1622
BseGI GGATG 4 cut(s) 563, 738, 1036, 1277
BseJI GATNNNNATC 2 cut(s) 351, 1581
BseLI CCNNNNNNNGG 2 cut(s) 441, 602
BseMI GCAATG 3 cut(s) 498, 822, 1566
BseMII CTCAG 3 cut(s) 495, 1236, 1341
BseNI ACTGG 1 cut(s) 523
BseRI GAGGAG 4 cut(s) 20, 23, 1010, 1118
BseSI GKGCMC 1 cut(s) 258
BseYI CCCAGC 1 cut(s) 1047
BsgI GTGCAG 2 cut(s) 162, 930
Bsh1236I CGCG 1 cut(s) 1380
BshNI GGYRCC 3 cut(s) 255, 641, 1626
BshTI ACCGGT 1 cut(s) 531
BshVI ATCGAT 1 cut(s) 1336
BsiSI CCGG 3 cut(s) 124, 532, 1707
BslFI GGGAC 1 cut(s) 423
BslI CCNNNNNNNGG 2 cut(s) 441, 602
BsmAI GTCTC 3 cut(s) 5, 1487, 1697
BsmBI CGTCTC 1 cut(s) 1487
BsmFI GGGAC 1 cut(s) 423
BsmI GAATGC 2 cut(s) 64, 873
Bsp1286I GDGCHC 1 cut(s) 258
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BspACI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
BspCNI CTCAG 3 cut(s) 496, 1237, 1340
BspDI ATCGAT 1 cut(s) 1336
BspFNI CGCG 1 cut(s) 1380
BspLI GGNNCC 5 cut(s) 257, 536, 643, 1360, 1628
BspMAI CTGCAG 1 cut(s) 1480
BspMI ACCTGC 1 cut(s) 1733
BspPI GGATC 1 cut(s) 436
BspT107I GGYRCC 3 cut(s) 255, 641, 1626
BspTI CTTAAG 1 cut(s) 623
BsrDI GCAATG 3 cut(s) 498, 822, 1566
BsrFI RCCGGY 1 cut(s) 531
BsrGI TGTACA 1 cut(s) 859
BsrI ACTGG 1 cut(s) 523
BssAI RCCGGY 1 cut(s) 531
BssECI CCNNGG 5 cut(s) 158, 435, 490, 917, 1622
BssMI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BssNI GRCGYC 2 cut(s) 266, 1627
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 2 cut(s) 158, 917
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 4 cut(s) 492, 1151, 1623, 1668
Bst4CI ACNGT 3 cut(s) 467, 1490, 1681
Bst6I CTCTTC 1 cut(s) 1545
BstACI GRCGYC 2 cut(s) 266, 1627
BstAFI CTTAAG 1 cut(s) 623
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 859
BstC8I GCNNGC 4 cut(s) 305, 387, 396, 593
BstDEI CTNAG 5 cut(s) 504, 1245, 1295, 1327, 1605
BstF5I GGATG 4 cut(s) 563, 738, 1036, 1277
BstFNI CGCG 1 cut(s) 1380
BstH2I RGCGCY 1 cut(s) 1630
BstHHI GCGC 3 cut(s) 193, 247, 1629
BstKTI GATC 6 cut(s) 431, 529, 1301, 1306, 1336, 1340
BstMAI GTCTC 3 cut(s) 5, 1487, 1697
BstMBI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BstNI CCWGG 4 cut(s) 492, 1151, 1623, 1668
BstSCI CCNGG 4 cut(s) 490, 1149, 1621, 1666
BstSFI CTRYAG 1 cut(s) 1476
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 1 cut(s) 1380
BstV2I GAAGAC 2 cut(s) 488, 1662
BstX2I RGATCY 2 cut(s) 428, 1298
BstYI RGATCY 2 cut(s) 428, 1298
Bsu15I ATCGAT 1 cut(s) 1336
BsuTUI ATCGAT 1 cut(s) 1336
BtsCI GGATG 4 cut(s) 563, 738, 1036, 1277
BveI ACCTGC 1 cut(s) 1733
Cac8I GCNNGC 4 cut(s) 305, 387, 396, 593
CaiI CAGNNNCTG 2 cut(s) 833, 1695
CfoI GCGC 3 cut(s) 193, 247, 1629
Cfr10I RCCGGY 1 cut(s) 531
Cfr13I GGNCC 3 cut(s) 521, 1291, 1321
ClaI ATCGAT 1 cut(s) 1336
CseI GACGC 2 cut(s) 255, 839
Csp6I GTAC 3 cut(s) 127, 860, 1682
CspAI ACCGGT 1 cut(s) 531
CviAII CATG 6 cut(s) 344, 863, 1169, 1404, 1412, 1434
CviQI GTAC 3 cut(s) 127, 860, 1682
DdeI CTNAG 5 cut(s) 504, 1245, 1295, 1327, 1605
DinI GGCGCC 1 cut(s) 1628
DpnI GATC 6 cut(s) 430, 528, 1300, 1305, 1335, 1339
DpnII GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
Eam1104I CTCTTC 1 cut(s) 1545
EarI CTCTTC 1 cut(s) 1545
Eco130I CCWWGG 2 cut(s) 158, 917
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 3 cut(s) 521, 1291, 1321
Eco57I CTGAAG 1 cut(s) 693
EcoO109I RGGNCCY 2 cut(s) 1291, 1321
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 4 cut(s) 490, 1149, 1621, 1666
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 2 cut(s) 158, 917
EgeI GGCGCC 1 cut(s) 1628
EheI GGCGCC 1 cut(s) 1628
ErhI CCWWGG 2 cut(s) 158, 917
Esp3I CGTCTC 1 cut(s) 1487
FaeI CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
FalI AAGNNNNNCTT 2 cut(s) 1201, 1233
FaqI GGGAC 1 cut(s) 423
FatI CATG 6 cut(s) 343, 862, 1168, 1403, 1411, 1433
FauI CCCGC 2 cut(s) 300, 1052
FbaI TGATCA 1 cut(s) 1303
FokI GGATG 4 cut(s) 550, 745, 1023, 1264
FspAI RTGCGCAY 1 cut(s) 246
FspBI CTAG 1 cut(s) 764
FspI TGCGCA 1 cut(s) 246
GlaI GCGC 3 cut(s) 192, 246, 1628
GsaI CCCAGC 1 cut(s) 1051
GsuI CTGGAG 1 cut(s) 1524
HaeII RGCGCY 1 cut(s) 1630
HapII CCGG 3 cut(s) 124, 532, 1707
HgaI GACGC 2 cut(s) 255, 839
HhaI GCGC 3 cut(s) 193, 247, 1629
Hin1I GRCGYC 2 cut(s) 266, 1627
Hin1II CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
Hin6I GCGC 3 cut(s) 191, 245, 1627
HinP1I GCGC 3 cut(s) 191, 245, 1627
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 5 cut(s) 615, 1120, 1165, 1609, 1737
HpaII CCGG 3 cut(s) 124, 532, 1707
HphI GGTGA 2 cut(s) 521, 1165
Hpy166II GTNNAC 2 cut(s) 513, 1400
Hpy188I TCNGA 8 cut(s) 436, 748, 808, 1303, 1342, 1440, 1704, 1742
Hpy188III TCNNGA 5 cut(s) 29, 524, 910, 1124, 1133
Hpy8I GTNNAC 2 cut(s) 513, 1400
HpyCH4III ACNGT 3 cut(s) 467, 1490, 1681
HpyCH4IV ACGT 2 cut(s) 1496, 1684
HpyF3I CTNAG 5 cut(s) 504, 1245, 1295, 1327, 1605
HpySE526I ACGT 2 cut(s) 1496, 1684
Hsp92I GRCGYC 2 cut(s) 266, 1627
Hsp92II CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
HspAI GCGC 3 cut(s) 191, 245, 1627
KasI GGCGCC 1 cut(s) 1626
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
LmnI GCTCC 1 cut(s) 1240
LweI GCATC 3 cut(s) 658, 1000, 1286
MaeI CTAG 1 cut(s) 764
MaeII ACGT 2 cut(s) 1496, 1684
MaeIII GTNAC 2 cut(s) 113, 1484
MalI GATC 6 cut(s) 430, 528, 1300, 1305, 1335, 1339
MboI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
MboII GAAGA 8 cut(s) 423, 446, 482, 493, 725, 1205, 1562, 1667
MfeI CAATTG 1 cut(s) 78
MflI RGATCY 2 cut(s) 428, 1298
MhlI GDGCHC 1 cut(s) 258
Mly113I GGCGCC 1 cut(s) 1627
MroXI GAANNNNTTC 1 cut(s) 1164
MseI TTAA 6 cut(s) 66, 177, 318, 624, 1542, 1662
MslI CAYNNNNRTG 1 cut(s) 885
MspA1I CMGCKG 4 cut(s) 146, 541, 1047, 1331
MspCI CTTAAG 1 cut(s) 623
MspI CCGG 3 cut(s) 124, 532, 1707
MspR9I CCNGG 4 cut(s) 492, 1151, 1623, 1668
MunI CAATTG 1 cut(s) 78
Mva1269I GAATGC 2 cut(s) 64, 873
MvaI CCWGG 4 cut(s) 492, 1151, 1623, 1668
MvnI CGCG 1 cut(s) 1380
NarI GGCGCC 1 cut(s) 1627
NdeII GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
NlaIII CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
NlaIV GGNNCC 5 cut(s) 257, 536, 643, 1360, 1628
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 1 cut(s) 113
NsbI TGCGCA 1 cut(s) 246
OliI CACNNNNGTG 1 cut(s) 885
PctI GAATGC 2 cut(s) 64, 873
PdmI GAANNNNTTC 1 cut(s) 1164
PfeI GAWTC 5 cut(s) 615, 1120, 1165, 1609, 1737
PinAI ACCGGT 1 cut(s) 531
PluTI GGCGCC 1 cut(s) 1630
PpuMI RGGWCCY 2 cut(s) 1291, 1321
PshBI ATTAAT 2 cut(s) 318, 1662
PsiI TTATAA 2 cut(s) 381, 1716
Psp5II RGGWCCY 2 cut(s) 1291, 1321
Psp6I CCWGG 4 cut(s) 490, 1149, 1621, 1666
PspFI CCCAGC 1 cut(s) 1047
PspGI CCWGG 4 cut(s) 490, 1149, 1621, 1666
PspN4I GGNNCC 5 cut(s) 257, 536, 643, 1360, 1628
PspPI GGNCC 3 cut(s) 521, 1291, 1321
PspPPI RGGWCCY 2 cut(s) 1291, 1321
PstI CTGCAG 1 cut(s) 1480
PstNI CAGNNNCTG 2 cut(s) 833, 1695
PsuI RGATCY 2 cut(s) 428, 1298
PvuII CAGCTG 1 cut(s) 1331
RsaI GTAC 3 cut(s) 128, 861, 1683
RsaNI GTAC 3 cut(s) 127, 860, 1682
RseI CAYNNNNRTG 1 cut(s) 885
SaqAI TTAA 6 cut(s) 66, 177, 318, 624, 1542, 1662
Sau3AI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
Sau96I GGNCC 3 cut(s) 521, 1291, 1321
ScrFI CCNGG 4 cut(s) 492, 1151, 1623, 1668
SduI GDGCHC 1 cut(s) 258
SfaNI GCATC 3 cut(s) 658, 1000, 1286
SfcI CTRYAG 1 cut(s) 1476
SfoI GGCGCC 1 cut(s) 1628
SinI GGWCC 3 cut(s) 521, 1291, 1321
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 2 cut(s) 623, 883
SmoI CTYRAG 2 cut(s) 623, 883
SsiI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
SspDI GGCGCC 1 cut(s) 1626
SspI AATATT 2 cut(s) 1099, 1354
SspMI CTAG 1 cut(s) 764
StyD4I CCNGG 4 cut(s) 490, 1149, 1621, 1666
StyI CCWWGG 2 cut(s) 158, 917
TaaI ACNGT 3 cut(s) 467, 1490, 1681
TaiI ACGT 2 cut(s) 1499, 1687
TaqI TCGA 3 cut(s) 93, 1336, 1585
TatI WGTACW 1 cut(s) 859
TauI GCSGC 1 cut(s) 1380
TfiI GAWTC 5 cut(s) 615, 1120, 1165, 1609, 1737
Tru1I TTAA 6 cut(s) 66, 177, 318, 624, 1542, 1662
Tru9I TTAA 6 cut(s) 66, 177, 318, 624, 1542, 1662
TseFI GTSAC 1 cut(s) 113
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 7 cut(s) 450, 552, 726, 785, 917, 1025, 1157
TspGWI ACGGA 1 cut(s) 1199
Vha464I CTTAAG 1 cut(s) 623
VpaK11BI GGWCC 3 cut(s) 521, 1291, 1321
VspI ATTAAT 2 cut(s) 318, 1662
XapI RAATTY 4 cut(s) 845, 853, 905, 1313
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 1164
XspI CTAG 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.