pycom04g21030

MuDR family transposase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0000251
Physical Location & Seq
Forward (+)
22396509 .. 22397870
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g21030.1

Sequence Viewer

Length: 1362 bp
ATGCAAGCTTGGCGTGGCAAGGAGCGTAGCATGGCAGCACTTCATGGAACTTTTGAAGAAGGGTATCAGCTTCTTCCTGCATACTGTGAGCAAATAAAGAAAACCAACCCTGGAAGCATCGCTTCAGTTTTTACCACTGGACAAGAAAATTGCTTCCACCGTCTCTTCATTTCTTACCGTGCATCAATATATGGGTTTATACATGCTTGTAGGCCACTTTTGGAAATTGATAGATCGCACCTCAAAGGCAAATACTTGGGTTCCTTACTTTGTGCTGCAGCTGTTGATGCTGATGATACATTATTTCCACTGGCAATAGGTATTGTTGATGTGGAAAGCGATGAAAATTGGATGTGGTTTATGTCAGAATTGCGAAAGCTTCTTGGAGTAAACACTGACAACATGCCTAGACTAACAATACTCTCTGAAAGACAAAGGGGTGTTGTAGAGGCGGTGGAAACCCATTTTCCTAGTGCCTTCCATGGTTTTTGTCTGCGTCATGTTAGTGAAAATTTTCGTGATACGTTTAAGAATGCGAAGTTGGTGAATATCTTCTGGAATGCTGTTTATGCTCTCACTGCAGTTGAATTTGACAGCAAGATTGCAGAGATGACAGAGATCTCACAAGACGTGATTGCATGGTTTCAACACTTCCCTCCCCAACATTGGGCTGTAGCATATTTTGAAGGCGTGCGATATGGCCATTTTACTCTCGGTGTTACGGAGTTGTTGTATAATTGGGCTCTTGAATGCCATGAGCTCCCTATTGTGCAAATGATGGAGCATATCCGTGATCAGTTATCATCGTGGTATAATGACCGCCGGGATACGGGAATGAGATGGACGTCAATTTTAGTACCATCTGCTGAGAAGCGGATTCTAGAGGCAATGGCTGATGCTCGATGCTATCAAGTACTTCGTGCAAATGAAGTTGAATTTGAGATTGTGTCTACGGAGAGGACAAATATTGTGGATATACAAACTCGTGTTTGCTCTTGTCGCCGTTGGCATATATATGGTCTACCTTGTGCACATGCTGCTGCTGCACTTATGTCTTGTGGACACAATGTCCATTTGTTTGCTGAGCCTTGCTTTACAGTAGCAAGTTACCGAGAGACCTATTCACAGATGATTCATCCCATTCCGGATAAGAGCTTGTGGAAGGAGCCAGGCGACGGAACAGAGGGTGGAAGCACCAATGTTGATATCATGATACGCCCACCCAAGACCCGACGGCCACCTGGAAGACCCAAGAAGAAGGTCCTTCGTGTAGAAAACTTCAAGAGGCCGAAGAGGGTGGTTCAATGCGGTCGCTGTCATATGTTAGGGCATTCTCAAAAGAAATGTACCCTGCCGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

454

Amino Acids

52.0

Weight (kDa)

8.13

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MULE PF10551 74 - 171 1.1e-15 MULE transposase domain
SWIM PF04434 324 - 354 1.4e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 848
AccI GTMKAC 2 cut(s) 950, 1021
AccIII TCCGGA 1 cut(s) 1144
AciI CCGC 5 cut(s) 452, 820, 874, 1308, 1355
AcoI YGGCCR 2 cut(s) 700, 1235
AcsI RAATTY 3 cut(s) 511, 587, 935
AcuI CTGAAG 1 cut(s) 108
AcyI GRCGYC 1 cut(s) 845
AfaI GTAC 3 cut(s) 858, 915, 1348
AfiI CCNNNNNNNGG 4 cut(s) 666, 667, 829, 1175
AgsI TTSAA 8 cut(s) 56, 587, 647, 686, 749, 935, 1282, 1304
AhdI GACNNNNNGTC 1 cut(s) 1067
AjiI CACGTC 1 cut(s) 631
AjnI CCWGG 3 cut(s) 109, 1168, 1240
AjuI GAANNNNNNNTTGG 2 cut(s) 524, 556
AluBI AGCT 6 cut(s) 8, 70, 281, 379, 760, 1155
AluI AGCT 6 cut(s) 8, 70, 281, 379, 760, 1155
Alw21I GWGCWC 2 cut(s) 762, 1033
Alw26I GTCTC 2 cut(s) 167, 1109
Alw44I GTGCAC 1 cut(s) 1029
Aor13HI TCCGGA 1 cut(s) 1144
AoxI GGCC 4 cut(s) 212, 700, 1235, 1286
ApaLI GTGCAC 1 cut(s) 1029
ApeKI GCWGC 6 cut(s) 35, 275, 278, 1037, 1040, 1043
ApoI RAATTY 3 cut(s) 511, 587, 935
Asp700I GAANNNNTTC 2 cut(s) 513, 551
AspS9I GGNCC 1 cut(s) 1261
AsuC2I CCSGG 1 cut(s) 824
AsuHPI GGTGA 1 cut(s) 556
AvaII GGWCC 1 cut(s) 1261
BaeGI GKGCMC 1 cut(s) 1033
BalI TGGCCA 1 cut(s) 702
BanII GRGCYC 2 cut(s) 745, 762
BauI CACGAG 1 cut(s) 984
BbsI GAAGAC 1 cut(s) 1252
Bbv12I GWGCWC 2 cut(s) 762, 1033
BbvI GCAGC 6 cut(s) 47, 262, 290, 1024, 1027, 1030
BccI CCATC 3 cut(s) 772, 834, 868
BceAI ACGGC 2 cut(s) 987, 1250
BciT130I CCWGG 3 cut(s) 111, 1170, 1242
BciVI GTATCC 1 cut(s) 820
BclI TGATCA 1 cut(s) 793
BcnI CCSGG 1 cut(s) 824
BcoDI GTCTC 2 cut(s) 167, 1109
BfaI CTAG 3 cut(s) 408, 471, 881
BfmI CTRYAG 3 cut(s) 276, 579, 672
BfuI GTATCC 1 cut(s) 820
BglII AGATCT 1 cut(s) 618
BisI GCNGC 7 cut(s) 36, 276, 279, 1038, 1041, 1044, 1355
BlpI GCTNAGC 1 cut(s) 1083
BlsI GCNGC 7 cut(s) 37, 277, 280, 1039, 1042, 1045, 1356
BmcAI AGTACT 1 cut(s) 915
Bme1390I CCNGG 4 cut(s) 111, 824, 1170, 1242
Bme18I GGWCC 1 cut(s) 1261
BmeRI GACNNNNNGTC 1 cut(s) 1067
BmgBI CACGTC 1 cut(s) 631
BmgT120I GGNCC 1 cut(s) 1261
BmiI GGNNCC 2 cut(s) 262, 1167
BmrFI CCNGG 4 cut(s) 111, 824, 1170, 1242
BmsI GCATC 5 cut(s) 126, 191, 277, 886, 893
BpiI GAAGAC 1 cut(s) 1252
Bpu1102I GCTNAGC 1 cut(s) 1083
BpuMI CCSGG 1 cut(s) 824
BsaHI GRCGYC 1 cut(s) 845
BsaI GGTCTC 1 cut(s) 1109
BsaJI CCNNGG 2 cut(s) 109, 481
BsaWI WCCGGW 1 cut(s) 1144
BsaXI ACNNNNNCTCC 2 cut(s) 716, 746
Bsc4I CCNNNNNNNGG 4 cut(s) 666, 667, 829, 1175
Bse1I ACTGG 2 cut(s) 142, 315
Bse3DI GCAATG 1 cut(s) 894
BseAI TCCGGA 1 cut(s) 1144
BseBI CCWGG 3 cut(s) 111, 1170, 1242
BseDI CCNNGG 2 cut(s) 109, 481
BseGI GGATG 2 cut(s) 357, 1135
BseLI CCNNNNNNNGG 4 cut(s) 666, 667, 829, 1175
BseMI GCAATG 1 cut(s) 894
BseMII CTCAG 2 cut(s) 858, 1074
BseNI ACTGG 2 cut(s) 142, 315
BseSI GKGCMC 1 cut(s) 1033
BseXI GCAGC 6 cut(s) 47, 262, 290, 1024, 1027, 1030
BsgI GTGCAG 1 cut(s) 1029
Bsh1285I CGRYCG 1 cut(s) 1312
BshFI GGCC 4 cut(s) 214, 702, 1237, 1288
BsiEI CGRYCG 1 cut(s) 1312
BsiHKAI GWGCWC 2 cut(s) 762, 1033
BsiSI CCGG 2 cut(s) 823, 1145
BslI CCNNNNNNNGG 4 cut(s) 666, 667, 829, 1175
BsmAI GTCTC 2 cut(s) 167, 1109
BsmBI CGTCTC 1 cut(s) 167
BsmI GAATGC 4 cut(s) 538, 565, 755, 1330
BsnI GGCC 4 cut(s) 214, 702, 1237, 1288
Bso31I GGTCTC 1 cut(s) 1109
Bsp1286I GDGCHC 3 cut(s) 745, 762, 1033
Bsp13I TCCGGA 1 cut(s) 1144
Bsp143I GATC 3 cut(s) 233, 618, 793
Bsp1720I GCTNAGC 1 cut(s) 1083
Bsp19I CCATGG 1 cut(s) 481
BspACI CCGC 5 cut(s) 452, 820, 874, 1308, 1355
BspANI GGCC 4 cut(s) 214, 702, 1237, 1288
BspCNI CTCAG 2 cut(s) 859, 1075
BspEI TCCGGA 1 cut(s) 1144
BspHI TCATGA 1 cut(s) 1209
BspLI GGNNCC 2 cut(s) 262, 1167
BspMAI CTGCAG 2 cut(s) 280, 583
BspTNI GGTCTC 1 cut(s) 1109
BsrDI GCAATG 1 cut(s) 894
BsrI ACTGG 2 cut(s) 142, 315
BssECI CCNNGG 2 cut(s) 109, 481
BssMI GATC 3 cut(s) 233, 618, 793
BssNI GRCGYC 1 cut(s) 845
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 1 cut(s) 481
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 3 cut(s) 111, 1170, 1242
Bst4CI ACNGT 4 cut(s) 86, 161, 179, 1099
Bst6I CTCTTC 2 cut(s) 170, 1286
BstACI GRCGYC 1 cut(s) 845
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstC8I GCNNGC 2 cut(s) 6, 692
BstDEI CTNAG 2 cut(s) 867, 1083
BstDSI CCRYGG 1 cut(s) 481
BstF5I GGATG 2 cut(s) 357, 1135
BstKTI GATC 3 cut(s) 236, 621, 796
BstMAI GTCTC 2 cut(s) 167, 1109
BstMBI GATC 3 cut(s) 233, 618, 793
BstMCI CGRYCG 1 cut(s) 1312
BstMWI GCNNNNNNNGC 7 cut(s) 10, 287, 569, 578, 999, 1037, 1043
BstNI CCWGG 3 cut(s) 111, 1170, 1242
BstNSI RCATGY 3 cut(s) 206, 406, 1037
BstSCI CCNGG 4 cut(s) 109, 822, 1168, 1240
BstSFI CTRYAG 3 cut(s) 276, 579, 672
BstSLI GKGCMC 1 cut(s) 1033
BstV1I GCAGC 6 cut(s) 47, 262, 290, 1024, 1027, 1030
BstV2I GAAGAC 1 cut(s) 1252
BstX2I RGATCY 1 cut(s) 618
BstYI RGATCY 1 cut(s) 618
BsuI GTATCC 1 cut(s) 820
BsuRI GGCC 4 cut(s) 214, 702, 1237, 1288
BtgI CCRYGG 1 cut(s) 481
BtgZI GCGATG 2 cut(s) 103, 354
BtrI CACGTC 1 cut(s) 631
BtsCI GGATG 2 cut(s) 357, 1135
BtsI GCAGTG 1 cut(s) 576
BtsIMutI CAGTG 4 cut(s) 135, 308, 393, 576
Cac8I GCNNGC 2 cut(s) 6, 692
CciI TCATGA 1 cut(s) 1209
Cfr13I GGNCC 1 cut(s) 1261
CseI GACGC 1 cut(s) 485
Csp6I GTAC 3 cut(s) 857, 914, 1347
CspCI CAANNNNNGTGG 2 cut(s) 951, 986
CviQI GTAC 3 cut(s) 857, 914, 1347
DdeI CTNAG 2 cut(s) 867, 1083
DpnI GATC 3 cut(s) 235, 620, 795
DpnII GATC 3 cut(s) 233, 618, 793
DriI GACNNNNNGTC 1 cut(s) 1067
EaeI YGGCCR 2 cut(s) 700, 1235
Eam1104I CTCTTC 2 cut(s) 170, 1286
Eam1105I GACNNNNNGTC 1 cut(s) 1067
EarI CTCTTC 2 cut(s) 170, 1286
Ecl136II GAGCTC 1 cut(s) 760
Eco130I CCWWGG 1 cut(s) 481
Eco24I GRGCYC 2 cut(s) 745, 762
Eco31I GGTCTC 1 cut(s) 1109
Eco32I GATATC 1 cut(s) 1207
Eco47I GGWCC 1 cut(s) 1261
Eco53kI GAGCTC 1 cut(s) 760
Eco57I CTGAAG 1 cut(s) 108
EcoICRI GAGCTC 1 cut(s) 760
EcoO109I RGGNCCY 1 cut(s) 1261
EcoRII CCWGG 3 cut(s) 109, 1168, 1240
EcoRV GATATC 1 cut(s) 1207
EcoT14I CCWWGG 1 cut(s) 481
EcoT38I GRGCYC 2 cut(s) 745, 762
ErhI CCWWGG 1 cut(s) 481
Esp3I CGTCTC 1 cut(s) 167
FalI AAGNNNNNCTT 2 cut(s) 106, 138
FauNDI CATATG 1 cut(s) 1320
FbaI TGATCA 1 cut(s) 793
FblI GTMKAC 2 cut(s) 950, 1021
Fnu4HI GCNGC 7 cut(s) 36, 276, 279, 1038, 1041, 1044, 1355
FokI GGATG 2 cut(s) 364, 1122
FriOI GRGCYC 2 cut(s) 745, 762
Fsp4HI GCNGC 7 cut(s) 36, 276, 279, 1038, 1041, 1044, 1355
FspBI CTAG 3 cut(s) 408, 471, 881
GluI GCNGC 7 cut(s) 36, 276, 279, 1038, 1041, 1044, 1355
HaeIII GGCC 4 cut(s) 214, 702, 1237, 1288
HapII CCGG 2 cut(s) 823, 1145
HgaI GACGC 1 cut(s) 485
Hin1I GRCGYC 1 cut(s) 845
HindIII AAGCTT 2 cut(s) 6, 377
HinfI GANTC 2 cut(s) 877, 1132
HpaII CCGG 2 cut(s) 823, 1145
HphI GGTGA 1 cut(s) 556
Hpy166II GTNNAC 5 cut(s) 391, 951, 1022, 1031, 1061
Hpy188I TCNGA 2 cut(s) 367, 427
Hpy188III TCNNGA 7 cut(s) 518, 556, 746, 881, 1145, 1210, 1282
Hpy8I GTNNAC 5 cut(s) 391, 951, 1022, 1031, 1061
Hpy99I CGWCG 2 cut(s) 1178, 1236
HpyAV CCTTC 6 cut(s) 53, 487, 680, 1156, 1252, 1274
HpyCH4III ACNGT 4 cut(s) 86, 161, 179, 1099
HpyCH4IV ACGT 3 cut(s) 524, 630, 845
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 287, 569, 578, 999, 1037, 1043
HpyF3I CTNAG 2 cut(s) 867, 1083
HpySE526I ACGT 3 cut(s) 524, 630, 845
Hsp92I GRCGYC 1 cut(s) 845
Kpn2I TCCGGA 1 cut(s) 1144
Ksp22I TGATCA 1 cut(s) 793
Kzo9I GATC 3 cut(s) 233, 618, 793
LmnI GCTCC 4 cut(s) 22, 765, 781, 1165
Lsp1109I GCAGC 6 cut(s) 47, 262, 290, 1024, 1027, 1030
LweI GCATC 5 cut(s) 126, 191, 277, 886, 893
MaeI CTAG 3 cut(s) 408, 471, 881
MaeII ACGT 3 cut(s) 524, 630, 845
MaeIII GTNAC 2 cut(s) 718, 1106
MalI GATC 3 cut(s) 235, 620, 795
MboI GATC 3 cut(s) 233, 618, 793
MboII GAAGA 7 cut(s) 65, 68, 157, 544, 1257, 1267, 1303
MflI RGATCY 1 cut(s) 618
MhlI GDGCHC 3 cut(s) 745, 762, 1033
MlsI TGGCCA 1 cut(s) 702
MluCI AATT 9 cut(s) 148, 225, 346, 368, 511, 587, 736, 849, 935
MluNI TGGCCA 1 cut(s) 702
MnlI CCTC 8 cut(s) 251, 442, 666, 877, 951, 1177, 1278, 1287
Mox20I TGGCCA 1 cut(s) 702
MroI TCCGGA 1 cut(s) 1144
MroXI GAANNNNTTC 2 cut(s) 513, 551
MscI TGGCCA 1 cut(s) 702
MseI TTAA 1 cut(s) 528
MslI CAYNNNNRTG 3 cut(s) 504, 789, 1014
Msp20I TGGCCA 1 cut(s) 702
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 2 cut(s) 823, 1145
MspR9I CCNGG 4 cut(s) 111, 824, 1170, 1242
Mva1269I GAATGC 4 cut(s) 538, 565, 755, 1330
MvaI CCWGG 3 cut(s) 111, 1170, 1242
MwoI GCNNNNNNNGC 7 cut(s) 10, 287, 569, 578, 999, 1037, 1043
NciI CCSGG 1 cut(s) 824
NcoI CCATGG 1 cut(s) 481
NdeI CATATG 1 cut(s) 1320
NdeII GATC 3 cut(s) 233, 618, 793
NlaIV GGNNCC 2 cut(s) 262, 1167
NspI RCATGY 3 cut(s) 206, 406, 1037
PagI TCATGA 1 cut(s) 1209
PctI GAATGC 4 cut(s) 538, 565, 755, 1330
PdmI GAANNNNTTC 2 cut(s) 513, 551
PfeI GAWTC 2 cut(s) 877, 1132
PkrI GCNGC 7 cut(s) 37, 277, 280, 1039, 1042, 1045, 1356
PpuMI RGGWCCY 1 cut(s) 1261
Psp124BI GAGCTC 1 cut(s) 762
Psp5II RGGWCCY 1 cut(s) 1261
Psp6I CCWGG 3 cut(s) 109, 1168, 1240
PspGI CCWGG 3 cut(s) 109, 1168, 1240
PspN4I GGNNCC 2 cut(s) 262, 1167
PspPI GGNCC 1 cut(s) 1261
PspPPI RGGWCCY 1 cut(s) 1261
PstI CTGCAG 2 cut(s) 280, 583
PsuI RGATCY 1 cut(s) 618
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 3 cut(s) 858, 915, 1348
RsaNI GTAC 3 cut(s) 857, 914, 1347
RseI CAYNNNNRTG 3 cut(s) 504, 789, 1014
SacI GAGCTC 1 cut(s) 762
SaqAI TTAA 1 cut(s) 528
SatI GCNGC 7 cut(s) 36, 276, 279, 1038, 1041, 1044, 1355
Sau3AI GATC 3 cut(s) 233, 618, 793
Sau96I GGNCC 1 cut(s) 1261
ScaI AGTACT 1 cut(s) 915
ScrFI CCNGG 4 cut(s) 111, 824, 1170, 1242
SduI GDGCHC 3 cut(s) 745, 762, 1033
SfaNI GCATC 5 cut(s) 126, 191, 277, 886, 893
SfcI CTRYAG 3 cut(s) 276, 579, 672
SinI GGWCC 1 cut(s) 1261
SmiMI CAYNNNNRTG 3 cut(s) 504, 789, 1014
Sse9I AATT 9 cut(s) 148, 225, 346, 368, 511, 587, 736, 849, 935
SsiI CCGC 5 cut(s) 452, 820, 874, 1308, 1355
SspI AATATT 1 cut(s) 967
SspMI CTAG 3 cut(s) 408, 471, 881
SstI GAGCTC 1 cut(s) 762
StyD4I CCNGG 4 cut(s) 109, 822, 1168, 1240
StyI CCWWGG 1 cut(s) 481
TaaI ACNGT 4 cut(s) 86, 161, 179, 1099
TaiI ACGT 3 cut(s) 527, 633, 848
TaqI TCGA 1 cut(s) 901
TasI AATT 9 cut(s) 148, 225, 346, 368, 511, 587, 736, 849, 935
TatI WGTACW 1 cut(s) 913
TauI GCSGC 1 cut(s) 1357
TfiI GAWTC 2 cut(s) 877, 1132
Tru1I TTAA 1 cut(s) 528
Tru9I TTAA 1 cut(s) 528
TscAI CASTG 4 cut(s) 142, 315, 400, 583
TseI GCWGC 6 cut(s) 35, 275, 278, 1037, 1040, 1043
TspDTI ATGAA 5 cut(s) 32, 157, 357, 942, 1124
TspGWI ACGGA 4 cut(s) 737, 779, 968, 1191
TspRI CASTG 4 cut(s) 142, 315, 400, 583
VneI GTGCAC 1 cut(s) 1029
VpaK11BI GGWCC 1 cut(s) 1261
XapI RAATTY 3 cut(s) 511, 587, 935
XbaI TCTAGA 1 cut(s) 880
XceI RCATGY 3 cut(s) 206, 406, 1037
XmiI GTMKAC 2 cut(s) 950, 1021
XmnI GAANNNNTTC 2 cut(s) 513, 551
XspI CTAG 3 cut(s) 408, 471, 881
ZraI GACGTC 1 cut(s) 846
ZrmI AGTACT 1 cut(s) 915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.