Prupe.7G251000_v2.0.a1

MuDR family transposase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000251
Physical Location & Seq
Reverse (-)
21207244 .. 21211547
4304 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G251000.3

Sequence Viewer

Length: 2715 bp
ATGATAACCGACATGCTCTTTTATGATCATTTCGATACTTTCCTTGTGATGGCGAGGACAAAGCTTATCTTAATCTGCCAGTCTGGTGGTGAATTCGTCATAAAGGATGATGGATCCATGTCATATACGGGTGGAGAGGCACATGCAGTAGATATCAATCTTGAAACCGTATTTGATGATCTCAAGTTTAAATTGGCTGAAATGTTGAATTTAGAATATAAATCCATATCCATGAAGTATTTTCTCCCAGGAAATACGCGAACTCTTATCACTTTATCCAATGATAAGGACCTAAAAAGGATGTATGAGTTCCATGGGAAATCAGTAACTGCTGATGTTTTTGTCATGGGGAAAGCAGGTTTTGACAGTGAAGCCTTAAGCACACAAAGAAGGGCATGTGGGATAAAACTGGCTGAATCTGTGACCCCTGTTGCCGCCTCCACTACTTCAGCTGCTGCTTTACACTCTAGTCCTCTTACAGTACCAACTGATGTTAAATCTGCAGTGGGTTCTGCAGCTGCCAATGCCATCCCAGTTGTCCCTGCCCCTCTTCCTCTATCAAAACAAACGGGCTCTGTCATGTCTGTCGAAGAAAGAACCCAAAGCCCAAGTGGAGTGGATGTTCCTAGTTCCATTCCATCTGATCCCGTTACTGTAACGGCTGATGCAAATGTCCACAGCTCGAATGAATTTGATATGAACGCTACCCCTGCTGATACTGTTAAGAAGCGAAGACGCACTGCTGCTTGGAAAATTGGTGCTGATGGTCCTACCATTGTTGCTGTCACTGACCATGTTGGGGAGAAAAGAAAAGTTATGCCCCGGAAGAAGAATATTCTTAGCCACAATACTACTGCAGAAACTGATGATGTGGGTCAGAAACAAGATACCCTTCCCTGTAAAGATAGTAGTAATAGCAGTGACCCTATACAGGATACTCTAGGGCAATCAAATGATGTTCCACCTGAAAAACTAGTCACATTATGGAAAGATGGTATCACTGGGGTTGGACAGGAATTCAAAAGTGTTAAAGAATTTCGTGATGCACTGCAAAAATATGCCATTGCTCATCGTTTTATGTATAGGTTAAAAAAGAATGATACTAACCGTGCAAGTGGCAGATGTATAGCTGAAGGCTGTTCCTGGAGAATTCACGCATCATGGGACTCATCTGTTCAAAGGTTTAGGATAAAGAATATGAACAAAATACATACATGTGGAAGGGAGTTCTGGAAATCTTATCATCCGACTAAAAGTTGGTTGGTAAGCATCATAAAAGACAGATTACTAGACAGCCCACATCTCAAGCCAAAAGAACTTGCCAATGGCATTCTTCAGGATTTTGGGATTGCGGTGAACTATACTCAAGTATGGCGTGGAATTGAAGATGCTAGGGAGCTACTTCTGGGTTCATATAGAGAGGCATATAACCAGTTACCTAGGTTTTGTGAGAAGATGGCAGAGGCAAATCCTGGTAGTAATATTACGCTTTTCACTGGTGATGATAGGAGATTTCAACGTCTCTTTGTTTGCTTTCATGCTTCAATACATGGTTTTCAGAATGGTTGTCGCCCCATTATTTTCCTTGATGCTACATCTTTAAAATCAAAATACCATGAGACTTTTTTTGCTGCTACAGCTTTGGATGGAGATGACGGTGTTTTCCCAGTTGCATTTGCTATAGTAGATGTTGAGAATGATGATAATTGGCGTTGGTTTTTGGAGCAGTTAAGGTCGGTGGTTTCAACCTCACAATCCTTAACTTTTGTCTCTGATAGAGAGAAGGGACTTAAGAAATCAGTGATTGAGGTATTTGAGAATGCCCACCATGGCTACTCATTGCACCGCCTTCTGGAAAGCTTTAAGAAAAACTTGAAGGGTCCATTCCATGGAGATGGGAAGGGTTCGTTGCCAATCAATTTTGTGGCTGCAGCCCATGCAGTCCGACTTGATGGTTTTAAAACAAGTACTGATCAAATTAGAAGGGTTTCTTCACAGGCTTATGACTGGGTCCTGCAAATTGAACCAGAATGTTGGACAAATGCATTATTTAAAGGTGAGCACTATAACCATGTGACATCCGACGTTGCAGAGACATACATCAAGTGGATAGAGGAAGTACGGGAGTTACCCATAGCACGGAAGATCGAAGTGCTAAGTTGTAAGCTGATGGAGTTGATAAACACTCGTCGAACAGATTCAAGTACATGGCCTACAAAGCTCACTCCATCCAAGGAGGAAAAGTTGCGACAAGAAACTCTTCAAGCATATGGTCTTAAAGTCTTATTTTCATCTGATACTCTTTTTGAGGTTCACAAGGACTCCATCAATGTTGTGGATATTGATAAATGGGACTGTAGCTGTCTGAAATGGAAAGCAACCGGCCTACCCTGCTGTCATGCTATTGCCGTCTTTAACTGCACTGGTAGGAATGTATATGATTATTGTTCAAGATACTTTAAAGCCAACAACTTTCAGTTGACGTATTCTGAATCTATAAACCCATCGGTCCCTTTCCAGCCCTTGGATAGTGACACAATTGACTTAGAGACTCTGCATGTACTTCCTCCATTCATCTCCAAGCCACAAAACCAAGAAAAGAAAAAGCAGACCAGAACAAAGGGTGTGATCACAAGGACAGTTACTTGCGCTAGGTGCAAGGAAGTTGGGCATAACAAAGCAACGTGCAAGGCACCCACCACCCCAACCCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE PB1 SWIM

Protein Analysis

905

Amino Acids

101.26

Weight (kDa)

8.31

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 347
AccB1I GGYRCC 1 cut(s) 2692
AccB7I CCANNNNNTGG 2 cut(s) 1889, 2524
AccII CGCG 1 cut(s) 259
AciI CCGC 3 cut(s) 435, 1352, 1846
AclWI GGATC 3 cut(s) 108, 121, 638
AcsI RAATTY 6 cut(s) 92, 208, 689, 1016, 1034, 1149
AcuI CTGAAG 3 cut(s) 432, 1152, 1319
AfaI GTAC 5 cut(s) 483, 1969, 2121, 2206, 2562
AfiI CCNNNNNNNGG 7 cut(s) 49, 799, 931, 1852, 1889, 2139, 2524
AflII CTTAAG 2 cut(s) 376, 1790
AflIII ACRYGT 1 cut(s) 1214
AhlI ACTAGT 1 cut(s) 973
AjnI CCWGG 3 cut(s) 247, 1142, 1471
AloI GAACNNNNNNTCC 2 cut(s) 606, 638
Alw21I GWGCWC 1 cut(s) 2064
Alw26I GTCTC 5 cut(s) 1526, 1613, 1774, 2087, 2543
AlwI GGATC 3 cut(s) 108, 121, 638
AlwNI CAGNNNCTG 3 cut(s) 329, 455, 863
AoxI GGCC 2 cut(s) 2210, 2383
ApeKI GCWGC 8 cut(s) 452, 455, 515, 518, 743, 1631, 1928, 1931
ApoI RAATTY 6 cut(s) 92, 208, 689, 1016, 1034, 1149
Asp700I GAANNNNTTC 3 cut(s) 1987, 2197, 2259
AspA2I CCTAGG 1 cut(s) 1439
AspLEI GCGC 1 cut(s) 2651
AspS9I GGNCC 5 cut(s) 289, 767, 1880, 2011, 2509
AsuC2I CCSGG 1 cut(s) 823
AsuHPI GGTGA 4 cut(s) 101, 1366, 1511, 2069
AvaII GGWCC 5 cut(s) 289, 767, 1880, 2011, 2509
AvrII CCTAGG 1 cut(s) 1439
BamHI GGATCC 1 cut(s) 113
BanI GGYRCC 1 cut(s) 2692
BanII GRGCYC 1 cut(s) 575
BbsI GAAGAC 1 cut(s) 739
Bbv12I GWGCWC 1 cut(s) 2064
BbvI GCAGC 8 cut(s) 439, 442, 505, 527, 730, 1618, 1915, 1943
BceAI ACGGC 2 cut(s) 675, 2393
BciT130I CCWGG 3 cut(s) 249, 1144, 1473
BciVI GTATCC 1 cut(s) 928
BclI TGATCA 3 cut(s) 25, 1972, 2628
BcnI CCSGG 1 cut(s) 823
BcoDI GTCTC 5 cut(s) 1526, 1613, 1774, 2087, 2543
BcuI ACTAGT 1 cut(s) 973
BfaI CTAG 8 cut(s) 468, 627, 941, 974, 1289, 1392, 1440, 2652
BfmI CTRYAG 7 cut(s) 501, 513, 855, 1635, 1680, 1929, 2356
BfrI CTTAAG 2 cut(s) 376, 1790
BfuAI ACCTGC 1 cut(s) 347
BfuI GTATCC 1 cut(s) 928
BisI GCNGC 9 cut(s) 435, 453, 456, 516, 519, 744, 1632, 1929, 1932
BlnI CCTAGG 1 cut(s) 1439
BlsI GCNGC 9 cut(s) 436, 454, 457, 517, 520, 745, 1633, 1930, 1933
BmcAI AGTACT 1 cut(s) 1969
Bme1390I CCNGG 4 cut(s) 249, 823, 1144, 1473
Bme18I GGWCC 5 cut(s) 289, 767, 1880, 2011, 2509
BmgT120I GGNCC 5 cut(s) 289, 767, 1880, 2011, 2509
BmiI GGNNCC 5 cut(s) 115, 1881, 2012, 2511, 2694
BmrFI CCNGG 4 cut(s) 249, 823, 1144, 1473
BmrI ACTGGG 4 cut(s) 527, 1011, 1661, 2017
BmsI GCATC 6 cut(s) 655, 1033, 1166, 1278, 1378, 1579
BmuI ACTGGG 4 cut(s) 527, 1011, 1661, 2017
BpiI GAAGAC 1 cut(s) 739
BpmI CTGGAG 1 cut(s) 1165
BpuEI CTTGAG 3 cut(s) 167, 1289, 1350
BpuMI CCSGG 1 cut(s) 823
BsaBI GATNNNNATC 1 cut(s) 156
BsaJI CCNNGG 8 cut(s) 247, 313, 821, 1439, 1828, 1888, 2232, 2523
BsaXI ACNNNNNCTCC 6 cut(s) 606, 636, 2228, 2258, 2306, 2336
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 799, 931, 1852, 1889, 2139, 2524
Bse118I RCCGGY 1 cut(s) 2381
Bse1I ACTGG 9 cut(s) 79, 414, 533, 1006, 1432, 1501, 1667, 2012, 2428
Bse3DI GCAATG 2 cut(s) 1062, 1838
Bse8I GATNNNNATC 1 cut(s) 156
BseBI CCWGG 3 cut(s) 249, 1144, 1473
BseDI CCNNGG 8 cut(s) 247, 313, 821, 1439, 1828, 1888, 2232, 2523
BseGI GGATG 8 cut(s) 112, 306, 528, 625, 1243, 1651, 2078, 2228
BseJI GATNNNNATC 1 cut(s) 156
BseLI CCNNNNNNNGG 7 cut(s) 49, 799, 931, 1852, 1889, 2139, 2524
BseMI GCAATG 2 cut(s) 1062, 1838
BseNI ACTGG 9 cut(s) 79, 414, 533, 1006, 1432, 1501, 1667, 2012, 2428
BseXI GCAGC 8 cut(s) 439, 442, 505, 527, 730, 1618, 1915, 1943
BsgI GTGCAG 1 cut(s) 2404
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 2 cut(s) 2212, 2385
BshNI GGYRCC 1 cut(s) 2692
BsiHKAI GWGCWC 1 cut(s) 2064
BsiSI CCGG 2 cut(s) 823, 2382
BslFI GGGAC 5 cut(s) 524, 1178, 1800, 2366, 2495
BslI CCNNNNNNNGG 7 cut(s) 49, 799, 931, 1852, 1889, 2139, 2524
BsmAI GTCTC 5 cut(s) 1526, 1613, 1774, 2087, 2543
BsmBI CGTCTC 1 cut(s) 1526
BsmFI GGGAC 5 cut(s) 524, 1178, 1800, 2366, 2495
BsmI GAATGC 2 cut(s) 1329, 1825
BsnI GGCC 2 cut(s) 2212, 2385
Bsp1286I GDGCHC 2 cut(s) 575, 2064
Bsp143I GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
Bsp19I CCATGG 3 cut(s) 313, 1828, 1888
BspACI CCGC 3 cut(s) 435, 1352, 1846
BspANI GGCC 2 cut(s) 2212, 2385
BspFNI CGCG 1 cut(s) 259
BspLI GGNNCC 5 cut(s) 115, 1881, 2012, 2511, 2694
BspMAI CTGCAG 4 cut(s) 505, 517, 859, 1933
BspMI ACCTGC 1 cut(s) 347
BspPI GGATC 3 cut(s) 108, 121, 638
BspT107I GGYRCC 1 cut(s) 2692
BspTI CTTAAG 2 cut(s) 376, 1790
BsrDI GCAATG 2 cut(s) 1062, 1838
BsrFI RCCGGY 1 cut(s) 2381
BsrI ACTGG 9 cut(s) 79, 414, 533, 1006, 1432, 1501, 1667, 2012, 2428
BssAI RCCGGY 1 cut(s) 2381
BssECI CCNNGG 8 cut(s) 247, 313, 821, 1439, 1828, 1888, 2232, 2523
BssMI GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
BssT1I CCWWGG 6 cut(s) 313, 1439, 1828, 1888, 2232, 2523
Bst2UI CCWGG 3 cut(s) 249, 1144, 1473
Bst4CI ACNGT 9 cut(s) 169, 368, 481, 655, 721, 1109, 1658, 2357, 2641
Bst6I CTCTTC 2 cut(s) 555, 2265
BstAFI CTTAAG 2 cut(s) 376, 1790
BstAPI GCANNNNNTGC 1 cut(s) 1937
BstDEI CTNAG 3 cut(s) 839, 2156, 2545
BstDSI CCRYGG 3 cut(s) 313, 1828, 1888
BstF5I GGATG 8 cut(s) 112, 306, 528, 625, 1243, 1651, 2078, 2228
BstFNI CGCG 1 cut(s) 259
BstHHI GCGC 1 cut(s) 2651
BstKTI GATC 7 cut(s) 28, 116, 181, 646, 1975, 2148, 2631
BstMAI GTCTC 5 cut(s) 1526, 1613, 1774, 2087, 2543
BstMBI GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
BstMWI GCNNNNNNNGC 7 cut(s) 524, 710, 1637, 1937, 2218, 2391, 2655
BstNI CCWGG 3 cut(s) 249, 1144, 1473
BstNSI RCATGY 5 cut(s) 16, 146, 399, 1218, 2561
BstSCI CCNGG 4 cut(s) 247, 821, 1142, 1471
BstSFI CTRYAG 7 cut(s) 501, 513, 855, 1635, 1680, 1929, 2356
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 8 cut(s) 439, 442, 505, 527, 730, 1618, 1915, 1943
BstV2I GAAGAC 1 cut(s) 739
BstX2I RGATCY 1 cut(s) 113
BstXI CCANNNNNNTGG 3 cut(s) 86, 1895, 2034
BstYI RGATCY 1 cut(s) 113
BsuI GTATCC 1 cut(s) 928
BsuRI GGCC 2 cut(s) 2212, 2385
BtgI CCRYGG 3 cut(s) 313, 1828, 1888
BtsCI GGATG 8 cut(s) 112, 306, 528, 625, 1243, 1651, 2078, 2228
BtsI GCAGTG 4 cut(s) 510, 738, 925, 1046
BveI ACCTGC 1 cut(s) 347
CaiI CAGNNNCTG 3 cut(s) 329, 455, 863
CfoI GCGC 1 cut(s) 2651
Cfr10I RCCGGY 1 cut(s) 2381
Cfr13I GGNCC 5 cut(s) 289, 767, 1880, 2011, 2509
CseI GACGC 1 cut(s) 744
Csp6I GTAC 5 cut(s) 482, 1968, 2120, 2205, 2561
CspCI CAANNNNNGTGG 2 cut(s) 597, 632
CviQI GTAC 5 cut(s) 482, 1968, 2120, 2205, 2561
DdeI CTNAG 3 cut(s) 839, 2156, 2545
DpnI GATC 7 cut(s) 27, 115, 180, 645, 1974, 2147, 2630
DpnII GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
DraI TTTAAA 5 cut(s) 190, 1602, 1960, 2053, 2461
Eam1104I CTCTTC 2 cut(s) 555, 2265
EarI CTCTTC 2 cut(s) 555, 2265
Eco130I CCWWGG 6 cut(s) 313, 1439, 1828, 1888, 2232, 2523
Eco24I GRGCYC 1 cut(s) 575
Eco32I GATATC 1 cut(s) 154
Eco47I GGWCC 5 cut(s) 289, 767, 1880, 2011, 2509
Eco57I CTGAAG 3 cut(s) 432, 1152, 1319
EcoO109I RGGNCCY 2 cut(s) 289, 2011
EcoRI GAATTC 3 cut(s) 92, 1016, 1149
EcoRII CCWGG 3 cut(s) 247, 1142, 1471
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 6 cut(s) 313, 1439, 1828, 1888, 2232, 2523
EcoT22I ATGCAT 1 cut(s) 2047
EcoT38I GRGCYC 1 cut(s) 575
ErhI CCWWGG 6 cut(s) 313, 1439, 1828, 1888, 2232, 2523
Esp3I CGTCTC 1 cut(s) 1526
FaqI GGGAC 5 cut(s) 524, 1178, 1800, 2366, 2495
FauNDI CATATG 1 cut(s) 2269
FbaI TGATCA 3 cut(s) 25, 1972, 2628
Fnu4HI GCNGC 9 cut(s) 435, 453, 456, 516, 519, 744, 1632, 1929, 1932
FokI GGATG 8 cut(s) 119, 313, 515, 632, 1230, 1658, 2065, 2215
FriOI GRGCYC 1 cut(s) 575
Fsp4HI GCNGC 9 cut(s) 435, 453, 456, 516, 519, 744, 1632, 1929, 1932
FspBI CTAG 8 cut(s) 468, 627, 941, 974, 1289, 1392, 1440, 2652
GlaI GCGC 1 cut(s) 2650
GluI GCNGC 9 cut(s) 435, 453, 456, 516, 519, 744, 1632, 1929, 1932
GsuI CTGGAG 1 cut(s) 1165
HaeIII GGCC 2 cut(s) 2212, 2385
HapII CCGG 2 cut(s) 823, 2382
HgaI GACGC 1 cut(s) 744
HhaI GCGC 1 cut(s) 2651
Hin6I GCGC 1 cut(s) 2649
HinP1I GCGC 1 cut(s) 2649
HincII GTYRAC 1 cut(s) 2481
HindII GTYRAC 1 cut(s) 2481
HindIII AAGCTT 2 cut(s) 62, 1858
HinfI GANTC 6 cut(s) 416, 1166, 2198, 2321, 2492, 2551
HpaII CCGG 2 cut(s) 823, 2382
HphI GGTGA 4 cut(s) 101, 1366, 1511, 2069
Hpy166II GTNNAC 4 cut(s) 676, 1357, 2314, 2481
Hpy188III TCNNGA 6 cut(s) 161, 1040, 1231, 1337, 1853, 2451
Hpy8I GTNNAC 4 cut(s) 676, 1357, 2314, 2481
Hpy99I CGWCG 2 cut(s) 2087, 2193
HpyAV CCTTC 9 cut(s) 384, 902, 1127, 1215, 1777, 1859, 1870, 1894, 1977
HpyCH4III ACNGT 9 cut(s) 169, 368, 481, 655, 721, 1109, 1658, 2357, 2641
HpyCH4IV ACGT 4 cut(s) 1519, 2085, 2483, 2684
HpyF10VI GCNNNNNNNGC 7 cut(s) 524, 710, 1637, 1937, 2218, 2391, 2655
HpyF3I CTNAG 3 cut(s) 839, 2156, 2545
HpySE526I ACGT 4 cut(s) 1519, 2085, 2483, 2684
HspAI GCGC 1 cut(s) 2649
Ksp22I TGATCA 3 cut(s) 25, 1972, 2628
Kzo9I GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
LmnI GCTCC 2 cut(s) 1396, 1723
Lsp1109I GCAGC 8 cut(s) 439, 442, 505, 527, 730, 1618, 1915, 1943
LweI GCATC 6 cut(s) 655, 1033, 1166, 1278, 1378, 1579
MaeI CTAG 8 cut(s) 468, 627, 941, 974, 1289, 1392, 1440, 2652
MaeII ACGT 4 cut(s) 1519, 2085, 2483, 2684
MalI GATC 7 cut(s) 27, 115, 180, 645, 1974, 2147, 2630
MboI GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
MfeI CAATTG 1 cut(s) 2538
MflI RGATCY 1 cut(s) 113
MhlI GDGCHC 2 cut(s) 575, 2064
MlyI GAGTC 3 cut(s) 1160, 2315, 2545
MmeI TCCRAC 5 cut(s) 988, 1271, 1969, 2015, 2106
Mph1103I ATGCAT 1 cut(s) 2047
MroXI GAANNNNTTC 3 cut(s) 1987, 2197, 2259
MslI CAYNNNNRTG 3 cut(s) 230, 1215, 1893
MspA1I CMGCKG 2 cut(s) 452, 518
MspCI CTTAAG 2 cut(s) 376, 1790
MspI CCGG 2 cut(s) 823, 2382
MspR9I CCNGG 4 cut(s) 249, 823, 1144, 1473
MunI CAATTG 1 cut(s) 2538
Mva1269I GAATGC 2 cut(s) 1329, 1825
MvaI CCWGG 3 cut(s) 249, 1144, 1473
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 7 cut(s) 524, 710, 1637, 1937, 2218, 2391, 2655
NciI CCSGG 1 cut(s) 823
NcoI CCATGG 3 cut(s) 313, 1828, 1888
NdeI CATATG 1 cut(s) 2269
NdeII GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
NlaIV GGNNCC 5 cut(s) 115, 1881, 2012, 2511, 2694
NmuCI GTSAC 6 cut(s) 421, 784, 920, 976, 2074, 2531
NsiI ATGCAT 1 cut(s) 2047
NspI RCATGY 5 cut(s) 16, 146, 399, 1218, 2561
PciI ACATGT 1 cut(s) 1214
PctI GAATGC 2 cut(s) 1329, 1825
PdmI GAANNNNTTC 3 cut(s) 1987, 2197, 2259
PfeI GAWTC 3 cut(s) 416, 2198, 2492
PflFI GACNNNGTC 1 cut(s) 2009
PflMI CCANNNNNTGG 2 cut(s) 1889, 2524
PfoI TCCNGGA 1 cut(s) 1142
PkrI GCNGC 9 cut(s) 436, 454, 457, 517, 520, 745, 1633, 1930, 1933
PleI GAGTC 3 cut(s) 1160, 2315, 2545
PpsI GAGTC 3 cut(s) 1160, 2315, 2545
PpuMI RGGWCCY 2 cut(s) 289, 2011
PscI ACATGT 1 cut(s) 1214
Psp5II RGGWCCY 2 cut(s) 289, 2011
Psp6I CCWGG 3 cut(s) 247, 1142, 1471
PspGI CCWGG 3 cut(s) 247, 1142, 1471
PspN4I GGNNCC 5 cut(s) 115, 1881, 2012, 2511, 2694
PspPI GGNCC 5 cut(s) 289, 767, 1880, 2011, 2509
PspPPI RGGWCCY 2 cut(s) 289, 2011
PstI CTGCAG 4 cut(s) 505, 517, 859, 1933
PstNI CAGNNNCTG 3 cut(s) 329, 455, 863
PsuI RGATCY 1 cut(s) 113
PsyI GACNNNGTC 1 cut(s) 2009
PvuII CAGCTG 2 cut(s) 452, 518
RsaI GTAC 5 cut(s) 483, 1969, 2121, 2206, 2562
RsaNI GTAC 5 cut(s) 482, 1968, 2120, 2205, 2561
RseI CAYNNNNRTG 3 cut(s) 230, 1215, 1893
SatI GCNGC 9 cut(s) 435, 453, 456, 516, 519, 744, 1632, 1929, 1932
Sau3AI GATC 7 cut(s) 25, 113, 178, 643, 1972, 2145, 2628
Sau96I GGNCC 5 cut(s) 289, 767, 1880, 2011, 2509
ScaI AGTACT 1 cut(s) 1969
SchI GAGTC 3 cut(s) 1160, 2315, 2545
ScrFI CCNGG 4 cut(s) 249, 823, 1144, 1473
SduI GDGCHC 2 cut(s) 575, 2064
SfaNI GCATC 6 cut(s) 655, 1033, 1166, 1278, 1378, 1579
SfcI CTRYAG 7 cut(s) 501, 513, 855, 1635, 1680, 1929, 2356
SinI GGWCC 5 cut(s) 289, 767, 1880, 2011, 2509
SmiMI CAYNNNNRTG 3 cut(s) 230, 1215, 1893
SmlI CTYRAG 5 cut(s) 182, 376, 1304, 1365, 1790
SmoI CTYRAG 5 cut(s) 182, 376, 1304, 1365, 1790
SpeI ACTAGT 1 cut(s) 973
SsiI CCGC 3 cut(s) 435, 1352, 1846
SspI AATATT 2 cut(s) 835, 1483
SspMI CTAG 8 cut(s) 468, 627, 941, 974, 1289, 1392, 1440, 2652
StyD4I CCNGG 4 cut(s) 247, 821, 1142, 1471
StyI CCWWGG 6 cut(s) 313, 1439, 1828, 1888, 2232, 2523
TaaI ACNGT 9 cut(s) 169, 368, 481, 655, 721, 1109, 1658, 2357, 2641
TaiI ACGT 4 cut(s) 1522, 2088, 2486, 2687
TaqI TCGA 5 cut(s) 33, 588, 683, 2148, 2191
TaqII GACCGA 1 cut(s) 2497
TatI WGTACW 3 cut(s) 1967, 2204, 2560
TauI GCSGC 1 cut(s) 437
TfiI GAWTC 3 cut(s) 416, 2198, 2492
TseFI GTSAC 6 cut(s) 421, 784, 920, 976, 2074, 2531
TseI GCWGC 8 cut(s) 452, 455, 515, 518, 743, 1631, 1928, 1931
Tsp45I GTSAC 6 cut(s) 421, 784, 920, 976, 2074, 2531
TspDTI ATGAA 8 cut(s) 248, 702, 713, 1214, 1401, 1526, 2280, 2563
TspGWI ACGGA 1 cut(s) 2155
Tth111I GACNNNGTC 1 cut(s) 2009
Van91I CCANNNNNTGG 2 cut(s) 1889, 2524
Vha464I CTTAAG 2 cut(s) 376, 1790
VpaK11BI GGWCC 5 cut(s) 289, 767, 1880, 2011, 2509
XapI RAATTY 6 cut(s) 92, 208, 689, 1016, 1034, 1149
XceI RCATGY 5 cut(s) 16, 146, 399, 1218, 2561
XcmI CCANNNNNNNNNTGG 2 cut(s) 608, 2332
XmaJI CCTAGG 1 cut(s) 1439
XmnI GAANNNNTTC 3 cut(s) 1987, 2197, 2259
XspI CTAG 8 cut(s) 468, 627, 941, 974, 1289, 1392, 1440, 2652
ZrmI AGTACT 1 cut(s) 1969
Zsp2I ATGCAT 1 cut(s) 2047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.