Prupe.8G156200_v2.0.a1

plant mutator transposase zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000251
Physical Location & Seq
Reverse (-)
16716096 .. 16719229
3134 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G156200.6

Sequence Viewer

Length: 1767 bp
ATGGAGGGCCAGACGTTTGTTGTTGGTCAAGAGTTCCCTGATGTCAAGGCCTTCAGGAATGCAATTAAAGAAGCTGCAATTGCTCAACACTTCGAGCTTCGTATCATAAAAAGTGACCTTATCCGCTACTTTGCGAAGTGTGCGACAGATGGATGTCCATGGCGCATCCGTGCTGTGAAGCTTCCTAATGCCCCAACCTTTACAATAAGAAGCCTTGAAGGGACACACACTTGTGGTAGAAATGCACACAATGGGCACCACCAGGCTTCTGTTGATTGGATTGTCAGTTTTATAGAAGAACGTCTGCGGGATAACATTAATTACAAACCAAAGGATATATTGCATGATATCCATAAGCAATATGGGATAACTATACCGTATAAGCAAGCTTGGCGTGCAAAGGAACGAGGACTTGCCGCGATTTATGGCTCTTCTGAGGAAGGATATTGCCTTCTTCCGTCATATTGTGAGCAAATAAAGAAGACCAACCCTGGAAGCATTGCAGAGGTGTTTACCACTGGTGTGGATCATCGGTTCCAGCGGTTGTTTGTTTCCTTTTATGCGTCCATTTGTGGTTTTTTGAATGGTTGCTTGCCCATCATTGGGCTCGGTGGAATCCAGCTTAAAAGCAAATATCTTGGTACCTTACTCTCTGCCACTTCTTTTGATGCTGATGGTGGGTTATTTCCGCTAGCATTTGGTGTTGTTGATGTAGAAACTGATGAGAGCTGGATGTGGTTCTTGTCAGAGTTGCATAAGGCGCTGGAGATGAACACTGAGAATATGCCGGAGCTCACATTTTTATCTGATGGGCACAAGGGCATTGCAGATGCAGTAAGAAGAAAATTCCCCAATTCATTACATGCTTTTTGCATGCGCCACTTGAGTGAAAGCATTGGAAAAGAGTTTAAGAACTCTAGGCTTGTTCATCTTCTATGGAATGCTGCATATGCCACTACCATGTTTGGCTTTAAAGAAAAAATGGCTGAAATAGAGGAGGTATCTCCGGAGGCTGCAAAATGGCTACAACAATTCCATCCTTCCCTCTGGGCATTAGTGTATTTTGAAGGAACACGTTATGGTCATCTCTCATCAAATATTGAGGAGTTCAATACGTGGATTCTCGAAGCTCGTGAGCTGCCCATAATCCAGGTGATTGCGACAATTCATATTAGATTGATGGCTGAGTTTGAAGAACGGCGTTTTAAGAGTAATTCTTGGTTTTCTGTACTTGCTCCATCCGCCGAGAAGCATATTTTAGAAGCCATCGGCCATGCATCAACATATCAAGTCCTTCGTTCTGATCAAGTAGAATTTGAGGTTCTCTCAGCTGACCGATCAGACATTGTGAATATTGGCACTCGTTGTTGTTCCTGCCGTGATTGGCAGCTATATGGGATACCATGTTCCCATGCTGTGGCTGCCTTCATCTCCTGTCGAAAAGATGTATACGCTTTTACAGAGAAATGTTTTACGGTTGCAAGTTACCGTGAGGCATATGCTGAACAGATATACCCTATCCCTGGAAAAGTTGAATGGAGAAACGCAGATGAGGCTTGTGTGGATGACGATACTCGAGTTGTGCGACCTCCTAAGTTTCGTAGACCGCCAGGACGCCCAGAAAAGAAACGAATTTGTGTAGAGGACCTTAATCGTGAGAAACATACTGTGCATTGTAGTCGGTGTAACCAAACTGGACATTACAAGACAACTTGCAAAGCAGAGACTTGCAAAGCAGAGATTATGGATAGTATCGAACAGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

589

Amino Acids

67.1

Weight (kDa)

6.89

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 641
AccB1I GGYRCC 2 cut(s) 255, 641
AccB7I CCANNNNNTGG 1 cut(s) 1417
AccI GTMKAC 2 cut(s) 1449, 1603
AccII CGCG 1 cut(s) 419
AccIII TCCGGA 1 cut(s) 1006
AciI CCGC 7 cut(s) 124, 307, 417, 541, 689, 1242, 1607
AclWI GGATC 1 cut(s) 534
AcoI YGGCCR 1 cut(s) 1270
AcsI RAATTY 3 cut(s) 845, 1313, 1632
AcuI CTGAAG 1 cut(s) 37
AcyI GRCGYC 1 cut(s) 1615
AfaI GTAC 2 cut(s) 643, 1230
AfiI CCNNNNNNNGG 4 cut(s) 602, 603, 1417, 1523
AflIII ACRYGT 1 cut(s) 1073
AgsI TTSAA 6 cut(s) 218, 583, 1067, 1111, 1193, 1535
AjnI CCWGG 5 cut(s) 261, 490, 1149, 1522, 1609
AleI CACNNNNGTG 3 cut(s) 231, 521, 885
AloI GAACNNNNNNTCC 4 cut(s) 518, 550, 1390, 1422
Alw21I GWGCWC 1 cut(s) 795
Alw26I GTCTC 1 cut(s) 1718
AlwI GGATC 1 cut(s) 534
Ama87I CYCGRG 1 cut(s) 1575
Aor13HI TCCGGA 1 cut(s) 1006
AoxI GGCC 3 cut(s) 7, 48, 1270
ApeKI GCWGC 6 cut(s) 74, 944, 1013, 1138, 1387, 1421
ApoI RAATTY 3 cut(s) 845, 1313, 1632
AseI ATTAAT 1 cut(s) 318
Asp718I GGTACC 1 cut(s) 641
AspLEI GCGC 3 cut(s) 165, 763, 879
AspS9I GGNCC 2 cut(s) 7, 1645
AsuHPI GGTGA 1 cut(s) 1165
AsuNHI GCTAGC 1 cut(s) 691
AvaI CYCGRG 1 cut(s) 1575
AvaII GGWCC 1 cut(s) 1645
BaeGI GKGCMC 2 cut(s) 258, 816
BaeI ACNNNNGTAYC 2 cut(s) 1563, 1596
BanI GGYRCC 2 cut(s) 255, 641
BanII GRGCYC 2 cut(s) 609, 795
BauI CACGAG 1 cut(s) 1131
BbsI GAAGAC 1 cut(s) 488
Bbv12I GWGCWC 1 cut(s) 795
BbvI GCAGC 6 cut(s) 61, 931, 1000, 1125, 1399, 1408
BccI CCATC 8 cut(s) 143, 605, 668, 803, 1044, 1174, 1246, 1274
BceAI ACGGC 2 cut(s) 1214, 1362
BcgI CGANNNNNNTGC 2 cut(s) 1661, 1695
BciT130I CCWGG 5 cut(s) 263, 492, 1151, 1524, 1611
BciVI GTATCC 1 cut(s) 1392
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 1 cut(s) 1718
BfaI CTAG 3 cut(s) 692, 918, 1765
BfoI RGCGCY 1 cut(s) 764
BfuI GTATCC 1 cut(s) 1392
BisI GCNGC 7 cut(s) 75, 417, 945, 1014, 1139, 1388, 1422
BlsI GCNGC 7 cut(s) 76, 418, 946, 1015, 1140, 1389, 1423
Bme1390I CCNGG 5 cut(s) 263, 492, 1151, 1524, 1611
Bme18I GGWCC 1 cut(s) 1645
BmeT110I CYCGRG 1 cut(s) 1575
BmgT120I GGNCC 2 cut(s) 7, 1645
BmiI GGNNCC 3 cut(s) 257, 536, 643
BmrFI CCNGG 5 cut(s) 263, 492, 1151, 1524, 1611
BmsI GCATC 4 cut(s) 174, 658, 820, 1286
BmtI GCTAGC 1 cut(s) 695
BpiI GAAGAC 1 cut(s) 488
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpmI CTGGAG 1 cut(s) 785
BpuEI CTTGAG 1 cut(s) 904
BsaAI YACGTR 1 cut(s) 1116
BsaHI GRCGYC 1 cut(s) 1615
BsaJI CCNNGG 3 cut(s) 158, 490, 1522
BsaWI WCCGGW 1 cut(s) 1006
Bsc4I CCNNNNNNNGG 4 cut(s) 602, 603, 1417, 1523
Bse1I ACTGG 2 cut(s) 523, 1699
Bse3DI GCAATG 2 cut(s) 498, 822
BseAI TCCGGA 1 cut(s) 1006
BseBI CCWGG 5 cut(s) 263, 492, 1151, 1524, 1611
BseDI CCNNGG 3 cut(s) 158, 490, 1522
BseGI GGATG 6 cut(s) 158, 165, 738, 1036, 1238, 1570
BseLI CCNNNNNNNGG 4 cut(s) 602, 603, 1417, 1523
BseMI GCAATG 2 cut(s) 498, 822
BseMII CTCAG 4 cut(s) 426, 768, 1176, 1341
BseNI ACTGG 2 cut(s) 523, 1699
BseRI GAGGAG 2 cut(s) 1010, 1118
BseSI GKGCMC 2 cut(s) 258, 816
BseXI GCAGC 6 cut(s) 61, 931, 1000, 1125, 1399, 1408
Bsh1236I CGCG 1 cut(s) 419
BshFI GGCC 3 cut(s) 9, 50, 1272
BshNI GGYRCC 2 cut(s) 255, 641
BsiHKAI GWGCWC 1 cut(s) 795
BsiHKCI CYCGRG 1 cut(s) 1575
BsiSI CCGG 2 cut(s) 788, 1007
BslFI GGGAC 1 cut(s) 235
BslI CCNNNNNNNGG 4 cut(s) 602, 603, 1417, 1523
BsmAI GTCTC 1 cut(s) 1718
BsmFI GGGAC 1 cut(s) 235
BsmI GAATGC 2 cut(s) 64, 946
BsnI GGCC 3 cut(s) 9, 50, 1272
BsoBI CYCGRG 1 cut(s) 1575
Bsp1286I GDGCHC 4 cut(s) 258, 609, 795, 816
Bsp13I TCCGGA 1 cut(s) 1006
Bsp143I GATC 3 cut(s) 526, 1303, 1337
Bsp19I CCATGG 1 cut(s) 158
BspACI CCGC 7 cut(s) 124, 307, 417, 541, 689, 1242, 1607
BspANI GGCC 3 cut(s) 9, 50, 1272
BspCNI CTCAG 4 cut(s) 427, 769, 1177, 1340
BspEI TCCGGA 1 cut(s) 1006
BspFNI CGCG 1 cut(s) 419
BspLI GGNNCC 3 cut(s) 257, 536, 643
BspOI GCTAGC 1 cut(s) 695
BspPI GGATC 1 cut(s) 534
BspQI GCTCTTC 1 cut(s) 436
BspT107I GGYRCC 2 cut(s) 255, 641
BsrDI GCAATG 2 cut(s) 498, 822
BsrI ACTGG 2 cut(s) 523, 1699
BssECI CCNNGG 3 cut(s) 158, 490, 1522
BssMI GATC 3 cut(s) 526, 1303, 1337
BssNAI GTATAC 1 cut(s) 1450
BssNI GRCGYC 1 cut(s) 1615
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 1 cut(s) 158
Bst1107I GTATAC 1 cut(s) 1450
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 5 cut(s) 263, 492, 1151, 1524, 1611
Bst4CI ACNGT 5 cut(s) 378, 1477, 1490, 1669, 1761
Bst6I CTCTTC 1 cut(s) 436
BstACI GRCGYC 1 cut(s) 1615
BstBAI YACGTR 1 cut(s) 1116
BstC8I GCNNGC 5 cut(s) 387, 396, 593, 693, 875
BstDEI CTNAG 5 cut(s) 435, 777, 1185, 1327, 1593
BstDSI CCRYGG 1 cut(s) 158
BstF5I GGATG 6 cut(s) 158, 165, 738, 1036, 1238, 1570
BstFNI CGCG 1 cut(s) 419
BstH2I RGCGCY 1 cut(s) 764
BstHHI GCGC 3 cut(s) 165, 763, 879
BstKTI GATC 3 cut(s) 529, 1306, 1340
BstMAI GTCTC 1 cut(s) 1718
BstMBI GATC 3 cut(s) 526, 1303, 1337
BstMWI GCNNNNNNNGC 9 cut(s) 80, 140, 391, 395, 760, 950, 1241, 1421, 1553
BstNI CCWGG 5 cut(s) 263, 492, 1151, 1524, 1611
BstNSI RCATGY 2 cut(s) 866, 877
BstSCI CCNGG 5 cut(s) 261, 490, 1149, 1522, 1609
BstSLI GKGCMC 2 cut(s) 258, 816
BstUI CGCG 1 cut(s) 419
BstV1I GCAGC 6 cut(s) 61, 931, 1000, 1125, 1399, 1408
BstV2I GAAGAC 1 cut(s) 488
BstXI CCANNNNNNTGG 1 cut(s) 523
BstZ17I GTATAC 1 cut(s) 1450
BsuI GTATCC 1 cut(s) 1392
BsuRI GGCC 3 cut(s) 9, 50, 1272
BtgI CCRYGG 1 cut(s) 158
BtsCI GGATG 6 cut(s) 158, 165, 738, 1036, 1238, 1570
BtsIMutI CAGTG 2 cut(s) 516, 774
Cac8I GCNNGC 5 cut(s) 387, 396, 593, 693, 875
CfoI GCGC 3 cut(s) 165, 763, 879
Cfr13I GGNCC 2 cut(s) 7, 1645
CseI GACGC 2 cut(s) 552, 1623
Csp6I GTAC 2 cut(s) 642, 1229
CspCI CAANNNNNGTGG 2 cut(s) 646, 681
CviAII CATG 8 cut(s) 159, 344, 863, 874, 961, 1274, 1404, 1412
CviQI GTAC 2 cut(s) 642, 1229
DdeI CTNAG 5 cut(s) 435, 777, 1185, 1327, 1593
DpnI GATC 3 cut(s) 528, 1305, 1339
DpnII GATC 3 cut(s) 526, 1303, 1337
DraI TTTAAA 1 cut(s) 973
EaeI YGGCCR 1 cut(s) 1270
Eam1104I CTCTTC 1 cut(s) 436
EarI CTCTTC 1 cut(s) 436
EciI GGCGGA 1 cut(s) 1231
Ecl136II GAGCTC 1 cut(s) 793
Eco130I CCWWGG 1 cut(s) 158
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 2 cut(s) 609, 795
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 1645
Eco53kI GAGCTC 1 cut(s) 793
Eco57I CTGAAG 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 1575
EcoICRI GAGCTC 1 cut(s) 793
EcoO109I RGGNCCY 1 cut(s) 1645
EcoRII CCWGG 5 cut(s) 261, 490, 1149, 1522, 1609
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 1 cut(s) 158
EcoT22I ATGCAT 1 cut(s) 1279
EcoT38I GRGCYC 2 cut(s) 609, 795
ErhI CCWWGG 1 cut(s) 158
FaeI CATG 8 cut(s) 162, 347, 866, 877, 964, 1277, 1407, 1415
FaqI GGGAC 1 cut(s) 235
FatI CATG 8 cut(s) 158, 343, 862, 873, 960, 1273, 1403, 1411
FauI CCCGC 1 cut(s) 300
FauNDI CATATG 2 cut(s) 949, 1498
FbaI TGATCA 1 cut(s) 1303
FblI GTMKAC 2 cut(s) 1449, 1603
Fnu4HI GCNGC 7 cut(s) 75, 417, 945, 1014, 1139, 1388, 1422
FokI GGATG 6 cut(s) 152, 165, 745, 1023, 1225, 1577
FriOI GRGCYC 2 cut(s) 609, 795
Fsp4HI GCNGC 7 cut(s) 75, 417, 945, 1014, 1139, 1388, 1422
FspBI CTAG 3 cut(s) 692, 918, 1765
GlaI GCGC 3 cut(s) 164, 762, 878
GluI GCNGC 7 cut(s) 75, 417, 945, 1014, 1139, 1388, 1422
GsuI CTGGAG 1 cut(s) 785
HaeII RGCGCY 1 cut(s) 764
HaeIII GGCC 3 cut(s) 9, 50, 1272
HapII CCGG 2 cut(s) 788, 1007
HgaI GACGC 2 cut(s) 552, 1623
HhaI GCGC 3 cut(s) 165, 763, 879
Hin1I GRCGYC 1 cut(s) 1615
Hin1II CATG 8 cut(s) 162, 347, 866, 877, 964, 1277, 1407, 1415
Hin6I GCGC 3 cut(s) 163, 761, 877
HinP1I GCGC 3 cut(s) 163, 761, 877
HindIII AAGCTT 2 cut(s) 179, 387
HinfI GANTC 2 cut(s) 615, 1120
HpaII CCGG 2 cut(s) 788, 1007
HphI GGTGA 1 cut(s) 1165
Hpy166II GTNNAC 3 cut(s) 513, 1450, 1604
Hpy188I TCNGA 5 cut(s) 436, 748, 808, 1303, 1342
Hpy188III TCNNGA 6 cut(s) 29, 55, 1007, 1124, 1133, 1655
Hpy8I GTNNAC 3 cut(s) 513, 1450, 1604
HpyAV CCTTC 8 cut(s) 61, 212, 434, 461, 1050, 1061, 1304, 1435
HpyCH4III ACNGT 5 cut(s) 378, 1477, 1490, 1669, 1761
HpyCH4IV ACGT 4 cut(s) 14, 301, 1075, 1115
HpyF10VI GCNNNNNNNGC 9 cut(s) 80, 140, 391, 395, 760, 950, 1241, 1421, 1553
HpyF3I CTNAG 5 cut(s) 435, 777, 1185, 1327, 1593
HpySE526I ACGT 4 cut(s) 14, 301, 1075, 1115
Hsp92I GRCGYC 1 cut(s) 1615
Hsp92II CATG 8 cut(s) 162, 347, 866, 877, 964, 1277, 1407, 1415
HspAI GCGC 3 cut(s) 163, 761, 877
Kpn2I TCCGGA 1 cut(s) 1006
KpnI GGTACC 1 cut(s) 645
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 3 cut(s) 526, 1303, 1337
LguI GCTCTTC 1 cut(s) 436
LmnI GCTCC 2 cut(s) 790, 1240
Lsp1109I GCAGC 6 cut(s) 61, 931, 1000, 1125, 1399, 1408
LweI GCATC 4 cut(s) 174, 658, 820, 1286
MaeI CTAG 3 cut(s) 692, 918, 1765
MaeII ACGT 4 cut(s) 14, 301, 1075, 1115
MaeIII GTNAC 3 cut(s) 113, 1484, 1685
MalI GATC 3 cut(s) 528, 1305, 1339
MboI GATC 3 cut(s) 526, 1303, 1337
MboII GAAGA 7 cut(s) 308, 423, 446, 493, 852, 923, 1205
MfeI CAATTG 1 cut(s) 78
MhlI GDGCHC 4 cut(s) 258, 609, 795, 816
Mph1103I ATGCAT 1 cut(s) 1279
MroI TCCGGA 1 cut(s) 1006
MseI TTAA 7 cut(s) 66, 318, 624, 909, 972, 1206, 1650
MslI CAYNNNNRTG 4 cut(s) 231, 521, 885, 959
MspA1I CMGCKG 2 cut(s) 541, 1331
MspI CCGG 2 cut(s) 788, 1007
MspR9I CCNGG 5 cut(s) 263, 492, 1151, 1524, 1611
MunI CAATTG 1 cut(s) 78
Mva1269I GAATGC 2 cut(s) 64, 946
MvaI CCWGG 5 cut(s) 263, 492, 1151, 1524, 1611
MvnI CGCG 1 cut(s) 419
MwoI GCNNNNNNNGC 9 cut(s) 80, 140, 391, 395, 760, 950, 1241, 1421, 1553
NcoI CCATGG 1 cut(s) 158
NdeI CATATG 2 cut(s) 949, 1498
NdeII GATC 3 cut(s) 526, 1303, 1337
NheI GCTAGC 1 cut(s) 691
NlaIII CATG 8 cut(s) 162, 347, 866, 877, 964, 1277, 1407, 1415
NlaIV GGNNCC 3 cut(s) 257, 536, 643
NmeAIII GCCGAG 1 cut(s) 1270
NmuCI GTSAC 1 cut(s) 113
NsiI ATGCAT 1 cut(s) 1279
NspI RCATGY 2 cut(s) 866, 877
OliI CACNNNNGTG 3 cut(s) 231, 521, 885
PaeI GCATGC 1 cut(s) 877
PaeR7I CTCGAG 1 cut(s) 1575
PceI AGGCCT 1 cut(s) 50
PciSI GCTCTTC 1 cut(s) 436
PcsI WCGNNNNNNNCGW 1 cut(s) 1582
PctI GAATGC 2 cut(s) 64, 946
PfeI GAWTC 2 cut(s) 615, 1120
PflMI CCANNNNNTGG 1 cut(s) 1417
PkrI GCNGC 7 cut(s) 76, 418, 946, 1015, 1140, 1389, 1423
Ppu21I YACGTR 1 cut(s) 1116
PpuMI RGGWCCY 1 cut(s) 1645
PshBI ATTAAT 1 cut(s) 318
Psp124BI GAGCTC 1 cut(s) 795
Psp5II RGGWCCY 1 cut(s) 1645
Psp6I CCWGG 5 cut(s) 261, 490, 1149, 1522, 1609
PspGI CCWGG 5 cut(s) 261, 490, 1149, 1522, 1609
PspN4I GGNNCC 3 cut(s) 257, 536, 643
PspPI GGNCC 2 cut(s) 7, 1645
PspPPI RGGWCCY 1 cut(s) 1645
PspXI VCTCGAGB 1 cut(s) 1575
PvuII CAGCTG 1 cut(s) 1331
RsaI GTAC 2 cut(s) 643, 1230
RsaNI GTAC 2 cut(s) 642, 1229
RseI CAYNNNNRTG 4 cut(s) 231, 521, 885, 959
SacI GAGCTC 1 cut(s) 795
SapI GCTCTTC 1 cut(s) 436
SaqAI TTAA 7 cut(s) 66, 318, 624, 909, 972, 1206, 1650
SatI GCNGC 7 cut(s) 75, 417, 945, 1014, 1139, 1388, 1422
Sau3AI GATC 3 cut(s) 526, 1303, 1337
Sau96I GGNCC 2 cut(s) 7, 1645
ScrFI CCNGG 5 cut(s) 263, 492, 1151, 1524, 1611
SduI GDGCHC 4 cut(s) 258, 609, 795, 816
SfaNI GCATC 4 cut(s) 174, 658, 820, 1286
Sfr274I CTCGAG 1 cut(s) 1575
SinI GGWCC 1 cut(s) 1645
SlaI CTCGAG 1 cut(s) 1575
SmiMI CAYNNNNRTG 4 cut(s) 231, 521, 885, 959
SmlI CTYRAG 2 cut(s) 883, 1575
SmoI CTYRAG 2 cut(s) 883, 1575
SphI GCATGC 1 cut(s) 877
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 7 cut(s) 124, 307, 417, 541, 689, 1242, 1607
SspI AATATT 2 cut(s) 1099, 1354
SspMI CTAG 3 cut(s) 692, 918, 1765
SstI GAGCTC 1 cut(s) 795
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 261, 490, 1149, 1522, 1609
StyI CCWWGG 1 cut(s) 158
TaaI ACNGT 5 cut(s) 378, 1477, 1490, 1669, 1761
TaiI ACGT 4 cut(s) 17, 304, 1078, 1118
TaqI TCGA 5 cut(s) 93, 1125, 1438, 1576, 1755
TaqII GACCGA 1 cut(s) 1350
TatI WGTACW 1 cut(s) 1228
TauI GCSGC 1 cut(s) 419
TfiI GAWTC 2 cut(s) 615, 1120
Tru1I TTAA 7 cut(s) 66, 318, 624, 909, 972, 1206, 1650
Tru9I TTAA 7 cut(s) 66, 318, 624, 909, 972, 1206, 1650
TscAI CASTG 2 cut(s) 523, 781
TseFI GTSAC 1 cut(s) 113
TseI GCWGC 6 cut(s) 74, 944, 1013, 1138, 1387, 1421
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 5 cut(s) 785, 846, 917, 1157, 1417
TspGWI ACGGA 2 cut(s) 158, 447
TspRI CASTG 2 cut(s) 523, 781
Van91I CCANNNNNTGG 1 cut(s) 1417
VpaK11BI GGWCC 1 cut(s) 1645
VspI ATTAAT 1 cut(s) 318
XapI RAATTY 3 cut(s) 845, 1313, 1632
XceI RCATGY 2 cut(s) 866, 877
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XhoI CTCGAG 1 cut(s) 1575
XmiI GTMKAC 2 cut(s) 1449, 1603
XspI CTAG 3 cut(s) 692, 918, 1765
Zsp2I ATGCAT 1 cut(s) 1279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.