pycom15g14690

MuDR family transposase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000251
Physical Location & Seq
Forward (+)
10062494 .. 10064254
1761 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14690.1

Sequence Viewer

Length: 1599 bp
ATGAAGTATTTTCTCCCTGGAAATACACGAACTCTCATCACTTTATCCAATGACAAGGCCCTGAAAAGGATGTATGAATTCCATGGGAATTTAATAACCGCTGATGTTTTTGTCCAGGGAAAAGAAGGTTTTGAGGCTGAAGCCTTAAACACACCAAAAAGGGCATGTGGGATGAAAGTGGCTGAATCTGTGAACCCTGTTGCAACCTTCACCACTTCTGCTGCCACTTTACATGCTAGTCCTCTATCAAAACAACCTGCCTCTAACATGTCTGTCGAAGATTCCATTCCAACTGGTTCCATGTCTGCTACTGCTGATGCAAGTCCGCACAGCTTGGACATTTTTGATATGAACTGTACCCCTGCTGATACTGTTAAGAAGCGAAGATGCACTGCTGCCTGGAAAATTGGTGCCAATGGTCCTACCATTGGTTCTGTCACTGACCATATTTGGGAGAAAAGAAAACGTATGTCCAGGAAGAAGAATATTCCTAGCTGCAACATTGCTACAGAAATTGATGATGTGGATCAGAGGCAAGATATCCTTCACGGTAAAGATAGTAGTACTAGCAATGACCCTATCCAGGCTACTCTAGTGGAATCAAATGATGCTCCACCTGAACTTTTACTCAAATTATGGAAAGATGCTATCACTGGGATTGGGCAGGAATTCAACAGTGCTAAAGAATTTCGTGATGCGCTGCAAAAATATGCCATTGCCCATCGTTTCATGTATAAGTTAAAAAAGAACGATACTAGCCGTGCAAGTGGCAGATGTATAGCCGAAGACTGTTCTTGGAAATTTTTTGCATCTTGGGACATATCTGTGAAAAAGTTTAGGATAAAGAGTACGACTGAAACACATACATGTGAATCAGAGCTCTCAACATATTATCATCCAAAAAGAAGTTGGTTGGTTAGCATTGTAAAAGATAGATTACTTGAGCGCCCACATCTCAAGCCTAAAGAACTTGCCAACATCATTCGTCAAGGTTTTGGGATTGCTGTGAACTATACTCATGTTTGGCGTGCAGTTGAGGATGCCAAGGAGAGACTTCTAGGTTCGTATAAAGAGGCATATGACCAGTTACCGAGATTTTGTGAGAAGATGACAGAGGCAAATCCTGGCAGTAGTATTAAGCTTTTCACTGGTGATGAGAGGAGATTTCAGCACCTATTTGTGTGCTTGCATGCTTCAATACATGGTTTTCAGAATGGTTGTCGCCCTATTCTTTTTCTTGATGCTGCATCTCTAAAATCAAGATACCATGAGACTTTTTTGGCAGCTACTGCTTTGGATGGAGATGACGGTCTTTTCCCGGTTGCATTTGCTATAGTAGACACTAAGAATGATGATAAGTGGCGGTGGTTTTTGGAGCAGTTAAGATCTGTACTCGCAACCTCTCAATCCTTAACTTTTGTCTCGGATAGAGAGAAGGGACTAAAGAAATCAGTGCTTGAAGTATTTGAGAGTGCCCACCATGGATATTCTATGCACCACCTTCTGCAAAGCTTCAAGAGAAACTTGAATGGTCCATACCATGGAGATGGGAAGGGTTCGTTGCCAATCTATTTTATAGCTGCTGCCCATGCAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE PB1 SWIM

Protein Analysis

533

Amino Acids

59.75

Weight (kDa)

8.87

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 216 - 281 2.2e-17 MuDR family transposase
MULE PF10551 411 - 503 1.6e-13 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 265
AccB1I GGYRCC 1 cut(s) 410
AccB7I CCANNNNNTGG 1 cut(s) 1541
AccI GTMKAC 1 cut(s) 1338
AciI CCGC 3 cut(s) 99, 326, 1363
AclWI GGATC 1 cut(s) 534
AcsI RAATTY 5 cut(s) 77, 88, 668, 686, 800
AcuI CTGAAG 1 cut(s) 159
AfaI GTAC 4 cut(s) 358, 565, 850, 1392
AfiI CCNNNNNNNGG 5 cut(s) 66, 428, 451, 583, 1541
AflIII ACRYGT 2 cut(s) 267, 866
AgsI TTSAA 5 cut(s) 673, 1197, 1460, 1516, 1528
AjnI CCWGG 6 cut(s) 16, 114, 398, 473, 582, 1123
AluBI AGCT 7 cut(s) 333, 495, 880, 1141, 1286, 1512, 1580
AluI AGCT 7 cut(s) 333, 495, 880, 1141, 1286, 1512, 1580
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 3 cut(s) 1045, 1265, 1426
AlwI GGATC 1 cut(s) 534
AlwNI CAGNNNCTG 1 cut(s) 1289
AoxI GGCC 1 cut(s) 57
ApeKI GCWGC 8 cut(s) 221, 395, 495, 700, 1244, 1283, 1580, 1583
ApoI RAATTY 5 cut(s) 77, 88, 668, 686, 800
AspLEI GCGC 2 cut(s) 700, 948
AspS9I GGNCC 3 cut(s) 58, 419, 1532
AsuC2I CCSGG 1 cut(s) 1319
AsuHPI GGTGA 2 cut(s) 202, 1163
AvaII GGWCC 2 cut(s) 419, 1532
BaeGI GKGCMC 1 cut(s) 1477
BanI GGYRCC 1 cut(s) 410
BanII GRGCYC 1 cut(s) 882
BbsI GAAGAC 1 cut(s) 792
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 8 cut(s) 208, 382, 482, 687, 1231, 1295, 1567, 1570
BccI CCATC 3 cut(s) 729, 1292, 1541
BceAI ACGGC 1 cut(s) 744
BciT130I CCWGG 6 cut(s) 18, 116, 400, 475, 584, 1125
BcnI CCSGG 1 cut(s) 1319
BcoDI GTCTC 3 cut(s) 1045, 1265, 1426
BfaI CTAG 6 cut(s) 237, 492, 567, 593, 756, 1058
BfmI CTRYAG 2 cut(s) 507, 1332
BfoI RGCGCY 1 cut(s) 949
BfuAI ACCTGC 1 cut(s) 265
BglII AGATCT 1 cut(s) 1385
BisI GCNGC 8 cut(s) 222, 396, 496, 701, 1245, 1284, 1581, 1584
BlsI GCNGC 8 cut(s) 223, 397, 497, 702, 1246, 1285, 1582, 1585
BmcAI AGTACT 1 cut(s) 565
Bme1390I CCNGG 7 cut(s) 18, 116, 400, 475, 584, 1125, 1319
Bme18I GGWCC 2 cut(s) 419, 1532
BmgT120I GGNCC 3 cut(s) 58, 419, 1532
BmiI GGNNCC 2 cut(s) 298, 412
BmrFI CCNGG 7 cut(s) 18, 116, 400, 475, 584, 1125, 1319
BmrI ACTGGG 1 cut(s) 663
BmsI GCATC 9 cut(s) 307, 377, 598, 634, 685, 818, 1030, 1231, 1256
BmuI ACTGGG 1 cut(s) 663
BpiI GAAGAC 1 cut(s) 792
BpuEI CTTGAG 2 cut(s) 941, 962
BpuMI CCSGG 1 cut(s) 1319
BsaBI GATNNNNATC 1 cut(s) 525
BsaJI CCNNGG 6 cut(s) 16, 82, 115, 1044, 1480, 1540
Bsc4I CCNNNNNNNGG 5 cut(s) 66, 428, 451, 583, 1541
Bse1I ACTGG 4 cut(s) 298, 658, 1084, 1153
Bse3DI GCAATG 3 cut(s) 501, 577, 714
Bse8I GATNNNNATC 1 cut(s) 525
BseBI CCWGG 6 cut(s) 18, 116, 400, 475, 584, 1125
BseDI CCNNGG 6 cut(s) 16, 82, 115, 1044, 1480, 1540
BseGI GGATG 5 cut(s) 75, 177, 895, 1045, 1303
BseJI GATNNNNATC 1 cut(s) 525
BseLI CCNNNNNNNGG 5 cut(s) 66, 428, 451, 583, 1541
BseMI GCAATG 3 cut(s) 501, 577, 714
BseNI ACTGG 4 cut(s) 298, 658, 1084, 1153
BseRI GAGGAG 1 cut(s) 1174
BseSI GKGCMC 1 cut(s) 1477
BseXI GCAGC 8 cut(s) 208, 382, 482, 687, 1231, 1295, 1567, 1570
BsgI GTGCAG 1 cut(s) 1050
BshFI GGCC 1 cut(s) 59
BshNI GGYRCC 1 cut(s) 410
BsiHKAI GWGCWC 1 cut(s) 882
BsiSI CCGG 1 cut(s) 1319
BslFI GGGAC 2 cut(s) 830, 1452
BslI CCNNNNNNNGG 5 cut(s) 66, 428, 451, 583, 1541
BsmAI GTCTC 3 cut(s) 1045, 1265, 1426
BsmFI GGGAC 2 cut(s) 830, 1452
BsnI GGCC 1 cut(s) 59
Bsp1286I GDGCHC 2 cut(s) 882, 1477
Bsp143I GATC 2 cut(s) 526, 1385
Bsp19I CCATGG 3 cut(s) 82, 1480, 1540
BspACI CCGC 3 cut(s) 99, 326, 1363
BspANI GGCC 1 cut(s) 59
BspLI GGNNCC 2 cut(s) 298, 412
BspMI ACCTGC 1 cut(s) 265
BspPI GGATC 1 cut(s) 534
BspT107I GGYRCC 1 cut(s) 410
BsrDI GCAATG 3 cut(s) 501, 577, 714
BsrI ACTGG 4 cut(s) 298, 658, 1084, 1153
BssECI CCNNGG 6 cut(s) 16, 82, 115, 1044, 1480, 1540
BssMI GATC 2 cut(s) 526, 1385
BssT1I CCWWGG 4 cut(s) 82, 1044, 1480, 1540
Bst2UI CCWGG 6 cut(s) 18, 116, 400, 475, 584, 1125
Bst4CI ACNGT 6 cut(s) 356, 373, 551, 677, 791, 1310
BstAPI GCANNNNNTGC 1 cut(s) 1289
BstC8I GCNNGC 3 cut(s) 1029, 1187, 1191
BstDEI CTNAG 1 cut(s) 1344
BstDSI CCRYGG 3 cut(s) 82, 1480, 1540
BstF5I GGATG 5 cut(s) 75, 177, 895, 1045, 1303
BstH2I RGCGCY 1 cut(s) 949
BstHHI GCGC 2 cut(s) 700, 948
BstKTI GATC 2 cut(s) 529, 1388
BstMAI GTCTC 3 cut(s) 1045, 1265, 1426
BstMBI GATC 2 cut(s) 526, 1385
BstMWI GCNNNNNNNGC 2 cut(s) 1289, 1589
BstNI CCWGG 6 cut(s) 18, 116, 400, 475, 584, 1125
BstNSI RCATGY 5 cut(s) 168, 236, 271, 870, 1193
BstSCI CCNGG 7 cut(s) 16, 114, 398, 473, 582, 1123, 1317
BstSFI CTRYAG 2 cut(s) 507, 1332
BstSLI GKGCMC 1 cut(s) 1477
BstV1I GCAGC 8 cut(s) 208, 382, 482, 687, 1231, 1295, 1567, 1570
BstV2I GAAGAC 1 cut(s) 792
BstX2I RGATCY 1 cut(s) 1385
BstXI CCANNNNNNTGG 1 cut(s) 1547
BstYI RGATCY 1 cut(s) 1385
BsuRI GGCC 1 cut(s) 59
BtgI CCRYGG 3 cut(s) 82, 1480, 1540
BtsCI GGATG 5 cut(s) 75, 177, 895, 1045, 1303
BtsI GCAGTG 1 cut(s) 390
BtsIMutI CAGTG 6 cut(s) 390, 438, 651, 682, 1146, 1458
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 3 cut(s) 1029, 1187, 1191
CaiI CAGNNNCTG 1 cut(s) 1289
CfoI GCGC 2 cut(s) 700, 948
Cfr13I GGNCC 3 cut(s) 58, 419, 1532
Csp6I GTAC 4 cut(s) 357, 564, 849, 1391
CviQI GTAC 4 cut(s) 357, 564, 849, 1391
DdeI CTNAG 1 cut(s) 1344
DpnI GATC 2 cut(s) 528, 1387
DpnII GATC 2 cut(s) 526, 1385
Ecl136II GAGCTC 1 cut(s) 880
Eco130I CCWWGG 4 cut(s) 82, 1044, 1480, 1540
Eco24I GRGCYC 1 cut(s) 882
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 2 cut(s) 419, 1532
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 1 cut(s) 159
EcoICRI GAGCTC 1 cut(s) 880
EcoO109I RGGNCCY 1 cut(s) 58
EcoRI GAATTC 2 cut(s) 77, 668
EcoRII CCWGG 6 cut(s) 16, 114, 398, 473, 582, 1123
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 4 cut(s) 82, 1044, 1480, 1540
EcoT38I GRGCYC 1 cut(s) 882
ErhI CCWWGG 4 cut(s) 82, 1044, 1480, 1540
FalI AAGNNNNNCTT 4 cut(s) 528, 560, 1508, 1540
FaqI GGGAC 2 cut(s) 830, 1452
FauNDI CATATG 1 cut(s) 1078
FblI GTMKAC 1 cut(s) 1338
Fnu4HI GCNGC 8 cut(s) 222, 396, 496, 701, 1245, 1284, 1581, 1584
FokI GGATG 5 cut(s) 82, 184, 882, 1052, 1310
FriOI GRGCYC 1 cut(s) 882
Fsp4HI GCNGC 8 cut(s) 222, 396, 496, 701, 1245, 1284, 1581, 1584
FspBI CTAG 6 cut(s) 237, 492, 567, 593, 756, 1058
GlaI GCGC 2 cut(s) 699, 947
GluI GCNGC 8 cut(s) 222, 396, 496, 701, 1245, 1284, 1581, 1584
HaeII RGCGCY 1 cut(s) 949
HaeIII GGCC 1 cut(s) 59
HapII CCGG 1 cut(s) 1319
HhaI GCGC 2 cut(s) 700, 948
Hin6I GCGC 2 cut(s) 698, 946
HinP1I GCGC 2 cut(s) 698, 946
HindIII AAGCTT 2 cut(s) 1139, 1510
HinfI GANTC 4 cut(s) 185, 281, 599, 872
HpaII CCGG 1 cut(s) 1319
HphI GGTGA 2 cut(s) 202, 1163
Hpy166II GTNNAC 3 cut(s) 193, 1009, 1339
Hpy188I TCNGA 5 cut(s) 531, 877, 1212, 1426, 1598
Hpy188III TCNNGA 4 cut(s) 692, 1238, 1260, 1516
Hpy8I GTNNAC 3 cut(s) 193, 1009, 1339
HpyAV CCTTC 6 cut(s) 119, 217, 554, 1429, 1511, 1546
HpyCH4III ACNGT 6 cut(s) 356, 373, 551, 677, 791, 1310
HpyCH4IV ACGT 1 cut(s) 466
HpyF10VI GCNNNNNNNGC 2 cut(s) 1289, 1589
HpyF3I CTNAG 1 cut(s) 1344
HpySE526I ACGT 1 cut(s) 466
HspAI GCGC 2 cut(s) 698, 946
Kzo9I GATC 2 cut(s) 526, 1385
LmnI GCTCC 2 cut(s) 616, 1375
Lsp1109I GCAGC 8 cut(s) 208, 382, 482, 687, 1231, 1295, 1567, 1570
LweI GCATC 9 cut(s) 307, 377, 598, 634, 685, 818, 1030, 1231, 1256
MaeI CTAG 6 cut(s) 237, 492, 567, 593, 756, 1058
MaeII ACGT 1 cut(s) 466
MaeIII GTNAC 2 cut(s) 436, 1086
MalI GATC 2 cut(s) 528, 1387
MboI GATC 2 cut(s) 526, 1385
MboII GAAGA 6 cut(s) 290, 396, 490, 493, 797, 1117
MflI RGATCY 1 cut(s) 1385
MhlI GDGCHC 2 cut(s) 882, 1477
MluCI AATT 8 cut(s) 77, 88, 405, 513, 632, 668, 686, 800
MmeI TCCRAC 1 cut(s) 314
MnlI CCTC 9 cut(s) 127, 252, 271, 525, 1030, 1066, 1108, 1152, 1411
MseI TTAA 7 cut(s) 92, 146, 375, 740, 1137, 1382, 1412
MslI CAYNNNNRTG 4 cut(s) 824, 865, 867, 1545
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 1 cut(s) 1319
MspR9I CCNGG 7 cut(s) 18, 116, 400, 475, 584, 1125, 1319
MvaI CCWGG 6 cut(s) 18, 116, 400, 475, 584, 1125
MwoI GCNNNNNNNGC 2 cut(s) 1289, 1589
NciI CCSGG 1 cut(s) 1319
NcoI CCATGG 3 cut(s) 82, 1480, 1540
NdeI CATATG 1 cut(s) 1078
NdeII GATC 2 cut(s) 526, 1385
NlaIV GGNNCC 2 cut(s) 298, 412
NmuCI GTSAC 1 cut(s) 436
NspI RCATGY 5 cut(s) 168, 236, 271, 870, 1193
PaeI GCATGC 1 cut(s) 1193
PciI ACATGT 2 cut(s) 267, 866
PfeI GAWTC 4 cut(s) 185, 281, 599, 872
PflMI CCANNNNNTGG 1 cut(s) 1541
PfoI TCCNGGA 1 cut(s) 473
PkrI GCNGC 8 cut(s) 223, 397, 497, 702, 1246, 1285, 1582, 1585
PscI ACATGT 2 cut(s) 267, 866
Psp124BI GAGCTC 1 cut(s) 882
Psp6I CCWGG 6 cut(s) 16, 114, 398, 473, 582, 1123
PspGI CCWGG 6 cut(s) 16, 114, 398, 473, 582, 1123
PspN4I GGNNCC 2 cut(s) 298, 412
PspPI GGNCC 3 cut(s) 58, 419, 1532
PstNI CAGNNNCTG 1 cut(s) 1289
PsuI RGATCY 1 cut(s) 1385
RsaI GTAC 4 cut(s) 358, 565, 850, 1392
RsaNI GTAC 4 cut(s) 357, 564, 849, 1391
RseI CAYNNNNRTG 4 cut(s) 824, 865, 867, 1545
SacI GAGCTC 1 cut(s) 882
SaqAI TTAA 7 cut(s) 92, 146, 375, 740, 1137, 1382, 1412
SatI GCNGC 8 cut(s) 222, 396, 496, 701, 1245, 1284, 1581, 1584
Sau3AI GATC 2 cut(s) 526, 1385
Sau96I GGNCC 3 cut(s) 58, 419, 1532
ScaI AGTACT 1 cut(s) 565
ScrFI CCNGG 7 cut(s) 18, 116, 400, 475, 584, 1125, 1319
SduI GDGCHC 2 cut(s) 882, 1477
SfaNI GCATC 9 cut(s) 307, 377, 598, 634, 685, 818, 1030, 1231, 1256
SfcI CTRYAG 2 cut(s) 507, 1332
SinI GGWCC 2 cut(s) 419, 1532
SmiMI CAYNNNNRTG 4 cut(s) 824, 865, 867, 1545
SmlI CTYRAG 2 cut(s) 941, 956
SmoI CTYRAG 2 cut(s) 941, 956
SphI GCATGC 1 cut(s) 1193
Sse9I AATT 8 cut(s) 77, 88, 405, 513, 632, 668, 686, 800
SsiI CCGC 3 cut(s) 99, 326, 1363
SspI AATATT 1 cut(s) 487
SspMI CTAG 6 cut(s) 237, 492, 567, 593, 756, 1058
SstI GAGCTC 1 cut(s) 882
StyD4I CCNGG 7 cut(s) 16, 114, 398, 473, 582, 1123, 1317
StyI CCWWGG 4 cut(s) 82, 1044, 1480, 1540
TaaI ACNGT 6 cut(s) 356, 373, 551, 677, 791, 1310
TaiI ACGT 1 cut(s) 469
TaqI TCGA 1 cut(s) 276
TasI AATT 8 cut(s) 77, 88, 405, 513, 632, 668, 686, 800
TatI WGTACW 2 cut(s) 563, 1390
TfiI GAWTC 4 cut(s) 185, 281, 599, 872
Tru1I TTAA 7 cut(s) 92, 146, 375, 740, 1137, 1382, 1412
Tru9I TTAA 7 cut(s) 92, 146, 375, 740, 1137, 1382, 1412
TscAI CASTG 6 cut(s) 397, 445, 658, 682, 1153, 1458
TseFI GTSAC 1 cut(s) 436
TseI GCWGC 8 cut(s) 221, 395, 495, 700, 1244, 1283, 1580, 1583
Tsp45I GTSAC 1 cut(s) 436
TspDTI ATGAA 5 cut(s) 17, 90, 188, 365, 718
TspRI CASTG 6 cut(s) 397, 445, 658, 682, 1153, 1458
Van91I CCANNNNNTGG 1 cut(s) 1541
VpaK11BI GGWCC 2 cut(s) 419, 1532
XapI RAATTY 5 cut(s) 77, 88, 668, 686, 800
XceI RCATGY 5 cut(s) 168, 236, 271, 870, 1193
XcmI CCANNNNNNNNNTGG 1 cut(s) 906
XmiI GTMKAC 1 cut(s) 1338
XspI CTAG 6 cut(s) 237, 492, 567, 593, 756, 1058
ZrmI AGTACT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.