Prupe.8G229900_v2.0.a1

MuDR family transposase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000251
Physical Location & Seq
Forward (+)
20538904 .. 20542366
3463 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G229900.1

Sequence Viewer

Length: 2298 bp
ATGGCAAACCATAATTTGATTCTTGGTCAAAATGGGGAGTTGCCATTGAGGCAGAATTCACATCCGGGACTGGGGCATGATCACAATTTGGTTCTAGGTCAAAGTCACAACTTTGCATTGGGGCATGCCCATGATCAGGATTTGGAATTAGGGCATGGTACTCATGACGATAAGCAGGTTTTTAGACATGCCCATGATCATGGATTAACTTTTGATCAGACAAATGAACATGAGATCGCGCTTCAGCATAGTCGTATTCAAAATCTTGAAGAAGAAGGTTTGGAGTTGGATCCAGATATTGGTCTTGAAACTGATCAAGAGAATATTGATGTTGATGACCATGATAACGAACTTGCTCTTACTGTGACTCACGGGTTGGGTTTATCAGAGAATCATGAATTGTCTGTTGTGGAGGAACATGATCTCCACGGAAATTTAGATTTAGCGATAGATGAAAATCAGGATATGGGTATTGTGCCTGACTCAGACTTGACTTTGCAGCATTCCCAGCTTTTAGATAGTCCTCCTGTCCTCCAGTGTCGATCCCTAGCTATAGCTTCTAATCACCAGCTGGCTGTTGGGCAAGAGTTTCCTGATGTCCAGAGCTGTCGAAGGGCATTGAGAGATGCTGCTATTGCGCTTCGCTTTGAGATGCAGACAGTTAAGTCTGACAAGACTCGTTTCACTGCCAAATGTGCAACTGAAGGATGCTCTTGGCGGATTCATGCTGCAAAGCTGCCAGGTGTTCCTACTTTCACTATAAGGACCATCCATGAGGAACACACCTGTGGTGGAATCACCCATCTTGGTCATCAACAAGCCTCAGTCCAGTGGGTTGCAGATTCTGTGGAACAACGCTTGAGGGAAAATCCTAATTACAAACCAAAAGAGATACTAGAAGAGATTCACCGAGTTCATGGGATTGCACTATCATATAAGCAGGCATGGAGAGGAAAGGAACGGCTCATGGCTGCTGTTCGTGGATCTTTTGAGGAAGATTATAGACTCCTTCCTCAATATTGTGACCAGATCAGAAGGACCAATCCTGGAAGTATTGCACAGGTTTATGGTAATCCTGATGATAACTGCTTCCAACGCCTATTTGTTTCATTACATGCATCAATATATGGGTTTCTGAATGCATGCCGGCCTCTTCTTGGACTTGATAGAACTCATCTGAAAAGCAAGTATCTTGGGACTTTGCTTTTTGCTACTGGATTTGATGGAGATGGAGCTCTATTCCCATTAGCATTTGGGGTAGTTGACGAAGAGAATGATGAAAATTGGATGTGGTTTCTCTCCGAGCTGCGTGTCCTGCTTGAAAATTATGCGGAGTACATGCCAAGACTTACAATTCTGTCTGATAGACAAAAGGGCATTGTCGATGGAGTGGAAGTTAACTTCCCAACTGCTTTTCATGGATTTTGTATGCGCCATCTAAGTGACAGTTTACGCAAGGAATTTAACAATACTTTGCTTGTTAACCTTCTCTGGGAAGCTGCTTATGCTCTTACTAGCATTGGGTTTGAACAAAAAATTCTTGAGATTAAAGCTGTATCACAGGAAGCAGCCCATTGGATTGAACAAATTTCACCTCGCTTGTGGGCAACAGCATATTTTGAGGGAACAAGGTTTGGGCAATTGACGGCTAATATGGTTGAATCTATAAATTCTTGGATAATAGAAGCATCTGGGCTTCCAATTATTCAAATGATGGAGTGTATCAGACGGCATCTGATGACTTGGTTCAATGAGCGCCGTGAAATGAGCATGCAGTGGACAGGCATACTTGTTCCTTCTGCTGAAAAGTGCGTGTTAGACGCACTTGCGCTTGCTCGTACTTATAATGTGGTCCGTTCAAATGAAGCTGAATTTAAAGTCAGATCCCATGAAGGATCACATATAGTTGATATTCGTAACCGTTGTTGTGAATGCCGTGGATGGCAGCTATGTGGGCTACCATGTTCTCATGCTGCGGCAGCTCTGGAGTCTTGTAGGCAACATGTTTATCGGTTCACTGAAAGTTGCTTCACAGTGGCAAATTATCGAAAAGCCTACTCAGAGACGATTCATCCAATTCCAGATAGAACTCTGTGGAAGGAGATGGTTGGATACCAGACTGATGGTAATACAGATATGTGGGTTATTATAAACCCGCCAAAGTCTCTTCGACCACCTGGACGACCAAGGAAAAGGCGAATCCGCACAGAAGATGGTAGTCGCACAAAACGAGTTGTCCATTGCAGCCGCTGTAATCAGACCGGACATTTCCGAACAACTTGTGCAGCGCCCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

766

Amino Acids

86.93

Weight (kDa)

5.9

Isoelectric Point (pI)

41.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1845, 2150
AasI GACNNNNNNGTC 1 cut(s) 664
Acc36I ACCTGC 1 cut(s) 166
AccB7I CCANNNNNTGG 1 cut(s) 299
AccII CGCG 1 cut(s) 239
AciI CCGC 6 cut(s) 718, 1331, 1976, 2156, 2203, 2248
AclWI GGATC 6 cut(s) 284, 297, 537, 991, 1878, 1903
AcsI RAATTY 7 cut(s) 55, 433, 1460, 1536, 1587, 1669, 1871
AcuI CTGAAG 2 cut(s) 227, 723
AfaI GTAC 3 cut(s) 160, 1337, 1840
AfiI CCNNNNNNNGG 5 cut(s) 71, 136, 299, 1157, 1492
AflIII ACRYGT 1 cut(s) 2002
AjnI CCWGG 3 cut(s) 739, 1045, 2176
AleI CACNNNNGTG 1 cut(s) 786
AloI GAACNNNNNNTCC 2 cut(s) 408, 440
Alw21I GWGCWC 1 cut(s) 1237
Alw26I GTCTC 2 cut(s) 2057, 2169
AlwI GGATC 6 cut(s) 284, 297, 537, 991, 1878, 1903
AlwNI CAGNNNCTG 2 cut(s) 845, 2250
AoxI GGCC 1 cut(s) 1148
ApoI RAATTY 7 cut(s) 55, 433, 1460, 1536, 1587, 1669, 1871
Asp700I GAANNNNTTC 1 cut(s) 903
AspLEI GCGC 6 cut(s) 241, 640, 1434, 1758, 1831, 2290
AspS9I GGNCC 3 cut(s) 765, 1038, 1852
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 4 cut(s) 557, 790, 899, 1584
AvaII GGWCC 3 cut(s) 765, 1038, 1852
BamHI GGATCC 1 cut(s) 289
BanII GRGCYC 1 cut(s) 1237
Bbv12I GWGCWC 1 cut(s) 1237
BceAI ACGGC 5 cut(s) 977, 1662, 1743, 1745, 1920
BciT130I CCWGG 3 cut(s) 741, 1047, 2178
BciVI GTATCC 1 cut(s) 2105
BclI TGATCA 5 cut(s) 79, 133, 196, 214, 313
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 2 cut(s) 2057, 2169
BfaI CTAG 4 cut(s) 95, 548, 896, 1515
BfmI CTRYAG 1 cut(s) 552
BfoI RGCGCY 2 cut(s) 1759, 2291
BfuAI ACCTGC 1 cut(s) 166
BfuI GTATCC 1 cut(s) 2105
BglI GCCNNNNNGGC 1 cut(s) 49
Bme1390I CCNGG 4 cut(s) 66, 741, 1047, 2178
Bme18I GGWCC 3 cut(s) 765, 1038, 1852
BmgT120I GGNCC 3 cut(s) 765, 1038, 1852
BmiI GGNNCC 1 cut(s) 291
BmrFI CCNGG 4 cut(s) 66, 741, 1047, 2178
BmrI ACTGGG 1 cut(s) 80
BmsI GCATC 6 cut(s) 616, 642, 698, 1127, 1697, 1741
BmuI ACTGGG 1 cut(s) 80
BpmI CTGGAG 2 cut(s) 518, 2006
BpuEI CTTGAG 2 cut(s) 880, 1562
BpuMI CCSGG 1 cut(s) 66
BsaBI GATNNNNATC 1 cut(s) 456
BsaJI CCNNGG 3 cut(s) 427, 1936, 2186
BsaWI WCCGGW 1 cut(s) 2261
BsaXI ACNNNNNCTCC 4 cut(s) 408, 438, 1380, 1410
Bsc4I CCNNNNNNNGG 5 cut(s) 71, 136, 299, 1157, 1492
Bse118I RCCGGY 1 cut(s) 1146
Bse1I ACTGG 4 cut(s) 75, 535, 829, 1219
Bse3DI GCAATG 1 cut(s) 2239
Bse8I GATNNNNATC 1 cut(s) 456
BseBI CCWGG 3 cut(s) 741, 1047, 2178
BseDI CCNNGG 3 cut(s) 427, 1936, 2186
BseGI GGATG 6 cut(s) 61, 713, 768, 1293, 1946, 2071
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 5 cut(s) 71, 136, 299, 1157, 1492
BseMI GCAATG 1 cut(s) 2239
BseMII CTCAG 3 cut(s) 498, 837, 2073
BseNI ACTGG 4 cut(s) 75, 535, 829, 1219
BseYI CCCAGC 1 cut(s) 507
Bsh1236I CGCG 1 cut(s) 239
BshFI GGCC 1 cut(s) 1150
BsiHKAI GWGCWC 1 cut(s) 1237
BsiSI CCGG 3 cut(s) 65, 1147, 2262
BslFI GGGAC 2 cut(s) 81, 1210
BslI CCNNNNNNNGG 5 cut(s) 71, 136, 299, 1157, 1492
BsmAI GTCTC 2 cut(s) 2057, 2169
BsmBI CGTCTC 1 cut(s) 2057
BsmFI GGGAC 2 cut(s) 81, 1210
BsmI GAATGC 3 cut(s) 502, 1144, 1937
BsnI GGCC 1 cut(s) 1150
Bsp1286I GDGCHC 1 cut(s) 1237
BspACI CCGC 6 cut(s) 718, 1331, 1976, 2156, 2203, 2248
BspANI GGCC 1 cut(s) 1150
BspCNI CTCAG 3 cut(s) 497, 836, 2072
BspFNI CGCG 1 cut(s) 239
BspHI TCATGA 2 cut(s) 163, 394
BspLI GGNNCC 1 cut(s) 291
BspMI ACCTGC 1 cut(s) 166
BspPI GGATC 6 cut(s) 284, 297, 537, 991, 1878, 1903
BsrDI GCAATG 1 cut(s) 2239
BsrFI RCCGGY 1 cut(s) 1146
BsrI ACTGG 4 cut(s) 75, 535, 829, 1219
BssAI RCCGGY 1 cut(s) 1146
BssECI CCNNGG 3 cut(s) 427, 1936, 2186
BssT1I CCWWGG 1 cut(s) 2186
Bst2UI CCWGG 3 cut(s) 741, 1047, 2178
Bst4CI ACNGT 5 cut(s) 364, 661, 1448, 1922, 2035
Bst6I CTCTTC 4 cut(s) 894, 1158, 1263, 2172
BstC8I GCNNGC 7 cut(s) 126, 573, 942, 1144, 1148, 1772, 1833
BstDEI CTNAG 4 cut(s) 484, 823, 1439, 2059
BstDSI CCRYGG 2 cut(s) 427, 1936
BstF5I GGATG 6 cut(s) 61, 713, 768, 1293, 1946, 2071
BstFNI CGCG 1 cut(s) 239
BstH2I RGCGCY 2 cut(s) 1759, 2291
BstHHI GCGC 6 cut(s) 241, 640, 1434, 1758, 1831, 2290
BstMAI GTCTC 2 cut(s) 2057, 2169
BstMWI GCNNNNNNNGC 9 cut(s) 49, 508, 635, 695, 1095, 1315, 1505, 1954, 1979
BstNI CCWGG 3 cut(s) 741, 1047, 2178
BstNSI RCATGY 7 cut(s) 128, 191, 1118, 1146, 1342, 1774, 2006
BstSCI CCNGG 4 cut(s) 64, 739, 1045, 2176
BstSFI CTRYAG 1 cut(s) 552
BstUI CGCG 1 cut(s) 239
BstX2I RGATCY 3 cut(s) 289, 983, 1883
BstXI CCANNNNNNTGG 2 cut(s) 200, 2123
BstYI RGATCY 3 cut(s) 289, 983, 1883
BsuI GTATCC 1 cut(s) 2105
BsuRI GGCC 1 cut(s) 1150
BtgI CCRYGG 2 cut(s) 427, 1936
BtsCI GGATG 6 cut(s) 61, 713, 768, 1293, 1946, 2071
BtsI GCAGTG 2 cut(s) 684, 1781
BtsIMutI CAGTG 6 cut(s) 542, 684, 836, 1781, 2016, 2040
BveI ACCTGC 1 cut(s) 166
Cac8I GCNNGC 7 cut(s) 126, 573, 942, 1144, 1148, 1772, 1833
CaiI CAGNNNCTG 2 cut(s) 845, 2250
CciI TCATGA 2 cut(s) 163, 394
CfoI GCGC 6 cut(s) 241, 640, 1434, 1758, 1831, 2290
Cfr10I RCCGGY 1 cut(s) 1146
Cfr13I GGNCC 3 cut(s) 765, 1038, 1852
CseI GACGC 1 cut(s) 1829
Csp6I GTAC 3 cut(s) 159, 1336, 1839
CviQI GTAC 3 cut(s) 159, 1336, 1839
DdeI CTNAG 4 cut(s) 484, 823, 1439, 2059
DraI TTTAAA 1 cut(s) 1876
DrdI GACNNNNNNGTC 1 cut(s) 664
DseDI GACNNNNNNGTC 1 cut(s) 664
Eam1104I CTCTTC 4 cut(s) 894, 1158, 1263, 2172
EarI CTCTTC 4 cut(s) 894, 1158, 1263, 2172
EciI GGCGGA 1 cut(s) 733
Ecl136II GAGCTC 1 cut(s) 1235
Eco130I CCWWGG 1 cut(s) 2186
Eco24I GRGCYC 1 cut(s) 1237
Eco47I GGWCC 3 cut(s) 765, 1038, 1852
Eco53kI GAGCTC 1 cut(s) 1235
Eco57I CTGAAG 2 cut(s) 227, 723
EcoICRI GAGCTC 1 cut(s) 1235
EcoRI GAATTC 1 cut(s) 55
EcoRII CCWGG 3 cut(s) 739, 1045, 2176
EcoT14I CCWWGG 1 cut(s) 2186
EcoT22I ATGCAT 2 cut(s) 1120, 1144
EcoT38I GRGCYC 1 cut(s) 1237
ErhI CCWWGG 1 cut(s) 2186
Esp3I CGTCTC 1 cut(s) 2057
FaqI GGGAC 2 cut(s) 81, 1210
FauI CCCGC 1 cut(s) 2163
FbaI TGATCA 5 cut(s) 79, 133, 196, 214, 313
FokI GGATG 6 cut(s) 48, 720, 755, 1300, 1953, 2058
FriOI GRGCYC 1 cut(s) 1237
FspBI CTAG 4 cut(s) 95, 548, 896, 1515
GlaI GCGC 6 cut(s) 240, 639, 1433, 1757, 1830, 2289
GsaI CCCAGC 1 cut(s) 511
GsuI CTGGAG 2 cut(s) 518, 2006
HaeII RGCGCY 2 cut(s) 1759, 2291
HaeIII GGCC 1 cut(s) 1150
HapII CCGG 3 cut(s) 65, 1147, 2262
HgaI GACGC 1 cut(s) 1829
HhaI GCGC 6 cut(s) 241, 640, 1434, 1758, 1831, 2290
Hin6I GCGC 6 cut(s) 239, 638, 1432, 1756, 1829, 2288
HinP1I GCGC 6 cut(s) 239, 638, 1432, 1756, 1829, 2288
HincII GTYRAC 3 cut(s) 1264, 1399, 1483
HindII GTYRAC 3 cut(s) 1264, 1399, 1483
HpaI GTTAAC 2 cut(s) 1399, 1483
HpaII CCGG 3 cut(s) 65, 1147, 2262
HphI GGTGA 4 cut(s) 557, 790, 899, 1584
Hpy166II GTNNAC 6 cut(s) 1264, 1399, 1451, 1483, 1779, 2016
Hpy8I GTNNAC 6 cut(s) 1264, 1399, 1451, 1483, 1779, 2016
HpyAV CCTTC 9 cut(s) 269, 606, 698, 1019, 1029, 1496, 1806, 1886, 2092
HpyCH4III ACNGT 5 cut(s) 364, 661, 1448, 1922, 2035
HpyF10VI GCNNNNNNNGC 9 cut(s) 49, 508, 635, 695, 1095, 1315, 1505, 1954, 1979
HpyF3I CTNAG 4 cut(s) 484, 823, 1439, 2059
HspAI GCGC 6 cut(s) 239, 638, 1432, 1756, 1829, 2288
KroI GCCGGC 1 cut(s) 1146
KroNI GCCGGC 1 cut(s) 1148
Ksp22I TGATCA 5 cut(s) 79, 133, 196, 214, 313
KspAI GTTAAC 2 cut(s) 1399, 1483
LmnI GCTCC 1 cut(s) 1232
LweI GCATC 6 cut(s) 616, 642, 698, 1127, 1697, 1741
MaeI CTAG 4 cut(s) 95, 548, 896, 1515
MaeIII GTNAC 5 cut(s) 104, 364, 1022, 1442, 1916
MboII GAAGA 8 cut(s) 281, 284, 911, 1007, 1145, 1280, 2159, 2222
MfeI CAATTG 1 cut(s) 1640
MflI RGATCY 3 cut(s) 289, 983, 1883
MhlI GDGCHC 1 cut(s) 1237
MlyI GAGTC 5 cut(s) 361, 476, 670, 999, 1997
MmeI TCCRAC 3 cut(s) 267, 1117, 2089
Mph1103I ATGCAT 2 cut(s) 1120, 1144
MroNI GCCGGC 1 cut(s) 1146
MroXI GAANNNNTTC 1 cut(s) 903
MseI TTAA 7 cut(s) 206, 663, 1398, 1464, 1482, 1548, 1875
MslI CAYNNNNRTG 5 cut(s) 129, 192, 198, 786, 1440
MspA1I CMGCKG 2 cut(s) 571, 2250
MspI CCGG 3 cut(s) 65, 1147, 2262
MspR9I CCNGG 4 cut(s) 66, 741, 1047, 2178
MunI CAATTG 1 cut(s) 1640
Mva1269I GAATGC 3 cut(s) 502, 1144, 1937
MvaI CCWGG 3 cut(s) 741, 1047, 2178
MvnI CGCG 1 cut(s) 239
MwoI GCNNNNNNNGC 9 cut(s) 49, 508, 635, 695, 1095, 1315, 1505, 1954, 1979
NaeI GCCGGC 1 cut(s) 1148
NciI CCSGG 1 cut(s) 66
NgoMIV GCCGGC 1 cut(s) 1146
NlaIV GGNNCC 1 cut(s) 291
NmuCI GTSAC 4 cut(s) 104, 364, 1022, 1442
NsiI ATGCAT 2 cut(s) 1120, 1144
NspI RCATGY 7 cut(s) 128, 191, 1118, 1146, 1342, 1774, 2006
OliI CACNNNNGTG 1 cut(s) 786
PaeI GCATGC 3 cut(s) 128, 1146, 1774
PagI TCATGA 2 cut(s) 163, 394
PciI ACATGT 1 cut(s) 2002
PcsI WCGNNNNNNNCGW 1 cut(s) 2227
PctI GAATGC 3 cut(s) 502, 1144, 1937
PdiI GCCGGC 1 cut(s) 1148
PdmI GAANNNNTTC 1 cut(s) 903
PfeI GAWTC 9 cut(s) 19, 391, 721, 795, 842, 904, 1661, 2068, 2199
PflMI CCANNNNNTGG 1 cut(s) 299
PfoI TCCNGGA 2 cut(s) 64, 1045
PleI GAGTC 5 cut(s) 361, 476, 670, 999, 1996
PpsI GAGTC 5 cut(s) 361, 476, 670, 999, 1996
PscI ACATGT 1 cut(s) 2002
PsiI TTATAA 2 cut(s) 1845, 2150
Psp124BI GAGCTC 1 cut(s) 1237
Psp6I CCWGG 3 cut(s) 739, 1045, 2176
PspFI CCCAGC 1 cut(s) 507
PspGI CCWGG 3 cut(s) 739, 1045, 2176
PspN4I GGNNCC 1 cut(s) 291
PspPI GGNCC 3 cut(s) 765, 1038, 1852
PstNI CAGNNNCTG 2 cut(s) 845, 2250
PsuI RGATCY 3 cut(s) 289, 983, 1883
PvuII CAGCTG 1 cut(s) 571
RsaI GTAC 3 cut(s) 160, 1337, 1840
RsaNI GTAC 3 cut(s) 159, 1336, 1839
RseI CAYNNNNRTG 5 cut(s) 129, 192, 198, 786, 1440
SacI GAGCTC 1 cut(s) 1237
SaqAI TTAA 7 cut(s) 206, 663, 1398, 1464, 1482, 1548, 1875
Sau96I GGNCC 3 cut(s) 765, 1038, 1852
SchI GAGTC 5 cut(s) 361, 476, 670, 999, 1997
ScrFI CCNGG 4 cut(s) 66, 741, 1047, 2178
SduI GDGCHC 1 cut(s) 1237
SfaNI GCATC 6 cut(s) 616, 642, 698, 1127, 1697, 1741
SfcI CTRYAG 1 cut(s) 552
SinI GGWCC 3 cut(s) 765, 1038, 1852
SmiMI CAYNNNNRTG 5 cut(s) 129, 192, 198, 786, 1440
SmlI CTYRAG 2 cut(s) 859, 1541
SmoI CTYRAG 2 cut(s) 859, 1541
SphI GCATGC 3 cut(s) 128, 1146, 1774
SsiI CCGC 6 cut(s) 718, 1331, 1976, 2156, 2203, 2248
SspI AATATT 2 cut(s) 325, 1019
SspMI CTAG 4 cut(s) 95, 548, 896, 1515
SstI GAGCTC 1 cut(s) 1237
StyD4I CCNGG 4 cut(s) 64, 739, 1045, 2176
StyI CCWWGG 1 cut(s) 2186
TaaI ACNGT 5 cut(s) 364, 661, 1448, 1922, 2035
TaqI TCGA 5 cut(s) 541, 610, 1383, 2047, 2170
TatI WGTACW 1 cut(s) 1335
TauI GCSGC 2 cut(s) 1979, 2250
TfiI GAWTC 9 cut(s) 19, 391, 721, 795, 842, 904, 1661, 2068, 2199
Tru1I TTAA 7 cut(s) 206, 663, 1398, 1464, 1482, 1548, 1875
Tru9I TTAA 7 cut(s) 206, 663, 1398, 1464, 1482, 1548, 1875
TscAI CASTG 6 cut(s) 542, 691, 836, 1781, 2023, 2040
TseFI GTSAC 4 cut(s) 104, 364, 1022, 1442
Tsp45I GTSAC 4 cut(s) 104, 364, 1022, 1442
TspGWI ACGGA 2 cut(s) 444, 1844
TspRI CASTG 6 cut(s) 542, 691, 836, 1781, 2023, 2040
Van91I CCANNNNNTGG 1 cut(s) 299
VpaK11BI GGWCC 3 cut(s) 765, 1038, 1852
XapI RAATTY 7 cut(s) 55, 433, 1460, 1536, 1587, 1669, 1871
XceI RCATGY 7 cut(s) 128, 191, 1118, 1146, 1342, 1774, 2006
XcmI CCANNNNNNNNNTGG 1 cut(s) 575
XmnI GAANNNNTTC 1 cut(s) 903
XspI CTAG 4 cut(s) 95, 548, 896, 1515
Zsp2I ATGCAT 2 cut(s) 1120, 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.