Rw6G003210

plant mutator transposase zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000251
Physical Location & Seq
Forward (+)
5166024 .. 5168983
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G003210.1

Sequence Viewer

Length: 1737 bp
ATGAAGGAGGAGACATTTTTTGTTGGTCAAGAGTTCCCTGATGTAAAAGCGTTTAGGAATGCGATTAAAGAAGCTGCAATTGCCCAACACTTTGAGGTTCGTATAATAAAAAGTGACCTTATCCGGTACTTTGCAAAGTGTGCAGCGGAGGCTTGTCCTTGGCGTATTCGTGCTGTGAAGCTTCCTAATGCGCCGACATTTGCGATAAGAAGCCTTGAAGGGAAGCACACTTGCGGTAGAAATGCGCACAACGGGCACCATCAGGCGTCTATTGATTGGATAGTCAGTTTTATAGAACAACGTCTGCGGGATAACATTAATTACAAGCCGAAGGATATATTGCATGATATTCATCAGCAGTATGGGATTACCATACCATATAAGCAGGCTTGGCGTGCAAAGGAACGGGGACTTGCTGCAATATATGGATCTTCCGAGGAAGGGTATTGCCTTCTTCCTTCATACTGTGAAGAAATAAAGAAGACCAACCCTGGAAGCATCGCTGAGGTGTTTACTACTGGTCCAGATCACCGGTTCCAGCGGTTATTTGTTTCCTTTTATTCATCCATTTATGGTTTTCTGAATGGTTGCTTGCCTGTTATTGGGCTTGGTGGAATCCATCTTAAGAGCAAATATCTCGGCACCTTACTCTCTGCAACTTCTTTTGATGCTGAGGGGGGTTTATTTCCACTTGCATTTGGTGTTGTTGATGAAGAAAATGATGAGAGCTGGATGTGGTTCTTGTCAGAGTTGCACAAGGCACTAGAGATGAACACCCAGAATATGCCACAGCTCACATTTATATCTGATACACAGAAGGGCATTGCAGACGCAGTGAGAAGGAAATTCCCAAATTCTGTACATGATATTTGCATTCGCCACTTGAGTGAAAGCATTGGGAAAGAATTCAAGAACCCAAGGCTTGTTCATCTATTATGGAAAGCTGCACAAGCCACTACGACGATTGGTTTCAAAGAAAAAATGGCTGAAATAGAGGAGGTTTCTTTAGATGCTGCAAAATGGCTGCAACAATTTCATCCTTCCCGCTGGGCATTTGTGTATTTTGAAGGAACACATTATGGTCATTTCTCATCAAATATTGAGGAGTTCAATAAATGGATTCTGGAAGCTCGTGAATTGCCCATAATCCAGGTGATTGAGAGGATTCATGGTAAATTGATGACGGAGTTTGAAGAACGGCGTAAGCAAAGTAATTCTTGGTTTTCCTTACTTGCTCCATCTGCTGAGAACTATATTTTAGAAGCCATCAGCCGTGCATCCACATATCAGGTCCTTAGATCTGATCAAGTTGAATTTGAGGTTCTCTCAGCTGATCGATCAGACATAGTGAATATTGGAACCCATTGTTGTTCCTGCCGCGAATGGCAGCTATATGGTTTACCATGTTCCCATGCTGTTGCTGCCCTCATCTCATGTCAGAAAGATGTATATGCCTTTACAGAGAAATGTTTTACTGCAGCAAGTTACCGTGAGGCGTATGCTGGAGAGATATATCCCATTGAAGCAAAACCCCGATGGGTAAAGACAGAAGAGGCTGCAATGACTGATGATGATAATCGAGTTTTTGTGCGACCTCCTAAGATTCGTAGACTGCCAGGGCGCCCCGAAAAGAAACGGGTTTGTGTAGAAGACATTAATCCTGGCAAACATACTGTACGTTGCAGTCTCTGTAATCAGACCGGACATTATAAGACAACCTGCAAAGAGAGATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

578

Amino Acids

66.23

Weight (kDa)

7.83

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 6 - 69 4.3e-23 MuDR family transposase
MULE PF10551 201 - 296 5.1e-19 MULE transposase domain
SWIM PF04434 450 - 479 1.5e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1710
Acc16I TGCGCA 1 cut(s) 246
Acc36I ACCTGC 1 cut(s) 1727
AccB1I GGYRCC 3 cut(s) 255, 641, 1620
AccI GTMKAC 1 cut(s) 1609
AccII CGCG 1 cut(s) 1380
AciI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
AclWI GGATC 1 cut(s) 436
AcsI RAATTY 4 cut(s) 845, 853, 905, 1313
AcyI GRCGYC 2 cut(s) 266, 1621
AfaI GTAC 3 cut(s) 128, 861, 1677
AfiI CCNNNNNNNGG 2 cut(s) 441, 602
AflII CTTAAG 1 cut(s) 623
AgeI ACCGGT 1 cut(s) 531
AgsI TTSAA 8 cut(s) 218, 910, 973, 1067, 1111, 1193, 1313, 1523
AjnI CCWGG 4 cut(s) 490, 1149, 1615, 1660
AleI CACNNNNGTG 1 cut(s) 885
AluBI AGCT 8 cut(s) 74, 181, 729, 793, 944, 1130, 1331, 1390
AluI AGCT 8 cut(s) 74, 181, 729, 793, 944, 1130, 1331, 1390
Alw26I GTCTC 2 cut(s) 5, 1691
AlwI GGATC 1 cut(s) 436
AlwNI CAGNNNCTG 1 cut(s) 1689
ApoI RAATTY 4 cut(s) 845, 853, 905, 1313
AseI ATTAAT 2 cut(s) 318, 1656
AsiGI ACCGGT 1 cut(s) 531
Asp700I GAANNNNTTC 1 cut(s) 905
AspLEI GCGC 3 cut(s) 193, 247, 1623
AspS9I GGNCC 2 cut(s) 521, 1291
AsuHPI GGTGA 2 cut(s) 521, 1165
AvaII GGWCC 2 cut(s) 521, 1291
BaeGI GKGCMC 1 cut(s) 258
BanI GGYRCC 3 cut(s) 255, 641, 1620
BauI CACGAG 1 cut(s) 1131
BbsI GAAGAC 2 cut(s) 488, 1656
BbvCI CCTCAGC 2 cut(s) 504, 672
BccI CCATC 5 cut(s) 267, 627, 1246, 1274, 1530
BceAI ACGGC 2 cut(s) 1214, 1257
BcgI CGANNNNNNTGC 2 cut(s) 619, 653
BciT130I CCWGG 4 cut(s) 492, 1151, 1617, 1662
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 2 cut(s) 5, 1691
BfaI CTAG 1 cut(s) 764
BfmI CTRYAG 1 cut(s) 1476
BfoI RGCGCY 1 cut(s) 1624
BfrI CTTAAG 1 cut(s) 623
BfuAI ACCTGC 1 cut(s) 1727
BglII AGATCT 1 cut(s) 1298
Bme1390I CCNGG 4 cut(s) 492, 1151, 1617, 1662
Bme18I GGWCC 2 cut(s) 521, 1291
BmgT120I GGNCC 2 cut(s) 521, 1291
BmiI GGNNCC 5 cut(s) 257, 536, 643, 1360, 1622
BmrFI CCNGG 4 cut(s) 492, 1151, 1617, 1662
BmsI GCATC 4 cut(s) 507, 658, 1000, 1286
BpiI GAAGAC 2 cut(s) 488, 1656
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpmI CTGGAG 1 cut(s) 1524
Bpu10I CCTNAGC 2 cut(s) 504, 672
BpuEI CTTGAG 1 cut(s) 904
Bsa29I ATCGAT 1 cut(s) 1336
BsaBI GATNNNNATC 2 cut(s) 351, 1575
BsaHI GRCGYC 2 cut(s) 266, 1621
BsaJI CCNNGG 5 cut(s) 158, 435, 490, 917, 1616
BsaWI WCCGGW 3 cut(s) 123, 531, 1700
Bsc4I CCNNNNNNNGG 2 cut(s) 441, 602
Bse118I RCCGGY 1 cut(s) 531
Bse1I ACTGG 1 cut(s) 523
Bse3DI GCAATG 2 cut(s) 822, 1566
Bse8I GATNNNNATC 2 cut(s) 351, 1575
BseBI CCWGG 4 cut(s) 492, 1151, 1617, 1662
BseCI ATCGAT 1 cut(s) 1336
BseDI CCNNGG 5 cut(s) 158, 435, 490, 917, 1616
BseGI GGATG 4 cut(s) 563, 738, 1036, 1277
BseJI GATNNNNATC 2 cut(s) 351, 1575
BseLI CCNNNNNNNGG 2 cut(s) 441, 602
BseMI GCAATG 2 cut(s) 822, 1566
BseMII CTCAG 4 cut(s) 495, 663, 1236, 1341
BseNI ACTGG 1 cut(s) 523
BseRI GAGGAG 3 cut(s) 23, 1010, 1118
BseSI GKGCMC 1 cut(s) 258
BseYI CCCAGC 1 cut(s) 1047
BsgI GTGCAG 2 cut(s) 162, 930
Bsh1236I CGCG 1 cut(s) 1380
BshNI GGYRCC 3 cut(s) 255, 641, 1620
BshTI ACCGGT 1 cut(s) 531
BshVI ATCGAT 1 cut(s) 1336
BsiSI CCGG 3 cut(s) 124, 532, 1701
BslFI GGGAC 1 cut(s) 423
BslI CCNNNNNNNGG 2 cut(s) 441, 602
BsmAI GTCTC 2 cut(s) 5, 1691
BsmFI GGGAC 1 cut(s) 423
BsmI GAATGC 2 cut(s) 64, 873
Bsp1286I GDGCHC 1 cut(s) 258
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BspACI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
BspCNI CTCAG 4 cut(s) 496, 664, 1237, 1340
BspDI ATCGAT 1 cut(s) 1336
BspFNI CGCG 1 cut(s) 1380
BspLI GGNNCC 5 cut(s) 257, 536, 643, 1360, 1622
BspMAI CTGCAG 1 cut(s) 1480
BspMI ACCTGC 1 cut(s) 1727
BspPI GGATC 1 cut(s) 436
BspT107I GGYRCC 3 cut(s) 255, 641, 1620
BspTI CTTAAG 1 cut(s) 623
BsrDI GCAATG 2 cut(s) 822, 1566
BsrFI RCCGGY 1 cut(s) 531
BsrGI TGTACA 1 cut(s) 859
BsrI ACTGG 1 cut(s) 523
BssAI RCCGGY 1 cut(s) 531
BssECI CCNNGG 5 cut(s) 158, 435, 490, 917, 1616
BssMI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BssNI GRCGYC 2 cut(s) 266, 1621
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 2 cut(s) 158, 917
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 4 cut(s) 492, 1151, 1617, 1662
Bst4CI ACNGT 3 cut(s) 467, 1490, 1675
Bst6I CTCTTC 1 cut(s) 1545
BstACI GRCGYC 2 cut(s) 266, 1621
BstAFI CTTAAG 1 cut(s) 623
BstAPI GCANNNNNTGC 1 cut(s) 140
BstAUI TGTACA 1 cut(s) 859
BstC8I GCNNGC 3 cut(s) 387, 396, 593
BstDEI CTNAG 6 cut(s) 504, 672, 1245, 1295, 1327, 1599
BstF5I GGATG 4 cut(s) 563, 738, 1036, 1277
BstFNI CGCG 1 cut(s) 1380
BstH2I RGCGCY 1 cut(s) 1624
BstHHI GCGC 3 cut(s) 193, 247, 1623
BstKTI GATC 6 cut(s) 431, 529, 1301, 1306, 1336, 1340
BstMAI GTCTC 2 cut(s) 5, 1691
BstMBI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
BstMWI GCNNNNNNNGC 9 cut(s) 80, 140, 149, 253, 391, 395, 950, 1241, 1421
BstNI CCWGG 4 cut(s) 492, 1151, 1617, 1662
BstSCI CCNGG 4 cut(s) 490, 1149, 1615, 1660
BstSFI CTRYAG 1 cut(s) 1476
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 1 cut(s) 1380
BstV2I GAAGAC 2 cut(s) 488, 1656
BstX2I RGATCY 2 cut(s) 428, 1298
BstYI RGATCY 2 cut(s) 428, 1298
Bsu15I ATCGAT 1 cut(s) 1336
BsuTUI ATCGAT 1 cut(s) 1336
BtgZI GCGATG 1 cut(s) 484
BtsCI GGATG 4 cut(s) 563, 738, 1036, 1277
BtsI GCAGTG 1 cut(s) 840
BtsIMutI CAGTG 1 cut(s) 840
BveI ACCTGC 1 cut(s) 1727
Cac8I GCNNGC 3 cut(s) 387, 396, 593
CaiI CAGNNNCTG 1 cut(s) 1689
CfoI GCGC 3 cut(s) 193, 247, 1623
Cfr10I RCCGGY 1 cut(s) 531
Cfr13I GGNCC 2 cut(s) 521, 1291
ClaI ATCGAT 1 cut(s) 1336
CseI GACGC 2 cut(s) 255, 839
Csp6I GTAC 3 cut(s) 127, 860, 1676
CspAI ACCGGT 1 cut(s) 531
CviAII CATG 6 cut(s) 344, 863, 1169, 1404, 1412, 1434
CviQI GTAC 3 cut(s) 127, 860, 1676
DdeI CTNAG 6 cut(s) 504, 672, 1245, 1295, 1327, 1599
DinI GGCGCC 1 cut(s) 1622
DpnI GATC 6 cut(s) 430, 528, 1300, 1305, 1335, 1339
DpnII GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
Eam1104I CTCTTC 1 cut(s) 1545
EarI CTCTTC 1 cut(s) 1545
Eco130I CCWWGG 2 cut(s) 158, 917
Eco47I GGWCC 2 cut(s) 521, 1291
EcoO109I RGGNCCY 1 cut(s) 1291
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 4 cut(s) 490, 1149, 1615, 1660
EcoT14I CCWWGG 2 cut(s) 158, 917
EgeI GGCGCC 1 cut(s) 1622
EheI GGCGCC 1 cut(s) 1622
ErhI CCWWGG 2 cut(s) 158, 917
FaeI CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
FalI AAGNNNNNCTT 2 cut(s) 1201, 1233
FaqI GGGAC 1 cut(s) 423
FatI CATG 6 cut(s) 343, 862, 1168, 1403, 1411, 1433
FauI CCCGC 2 cut(s) 300, 1052
FbaI TGATCA 1 cut(s) 1303
FblI GTMKAC 1 cut(s) 1609
FokI GGATG 4 cut(s) 550, 745, 1023, 1264
FspAI RTGCGCAY 1 cut(s) 246
FspBI CTAG 1 cut(s) 764
FspI TGCGCA 1 cut(s) 246
GlaI GCGC 3 cut(s) 192, 246, 1622
GsaI CCCAGC 1 cut(s) 1051
GsuI CTGGAG 1 cut(s) 1524
HaeII RGCGCY 1 cut(s) 1624
HapII CCGG 3 cut(s) 124, 532, 1701
HgaI GACGC 2 cut(s) 255, 839
HhaI GCGC 3 cut(s) 193, 247, 1623
Hin1I GRCGYC 2 cut(s) 266, 1621
Hin1II CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
Hin6I GCGC 3 cut(s) 191, 245, 1621
HinP1I GCGC 3 cut(s) 191, 245, 1621
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 5 cut(s) 615, 1120, 1165, 1603, 1731
HpaII CCGG 3 cut(s) 124, 532, 1701
HphI GGTGA 2 cut(s) 521, 1165
Hpy166II GTNNAC 3 cut(s) 513, 1400, 1610
Hpy188I TCNGA 9 cut(s) 436, 582, 748, 808, 1303, 1342, 1440, 1698, 1736
Hpy188III TCNNGA 5 cut(s) 29, 524, 910, 1124, 1133
Hpy8I GTNNAC 3 cut(s) 513, 1400, 1610
Hpy99I CGWCG 1 cut(s) 964
HpyAV CCTTC 9 cut(s) 212, 325, 434, 461, 468, 811, 834, 1050, 1061
HpyCH4III ACNGT 3 cut(s) 467, 1490, 1675
HpyCH4IV ACGT 2 cut(s) 301, 1678
HpyF10VI GCNNNNNNNGC 9 cut(s) 80, 140, 149, 253, 391, 395, 950, 1241, 1421
HpyF3I CTNAG 6 cut(s) 504, 672, 1245, 1295, 1327, 1599
HpySE526I ACGT 2 cut(s) 301, 1678
Hsp92I GRCGYC 2 cut(s) 266, 1621
Hsp92II CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
HspAI GCGC 3 cut(s) 191, 245, 1621
KasI GGCGCC 1 cut(s) 1620
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
LmnI GCTCC 1 cut(s) 1240
LweI GCATC 4 cut(s) 507, 658, 1000, 1286
MaeI CTAG 1 cut(s) 764
MaeII ACGT 2 cut(s) 301, 1678
MaeIII GTNAC 2 cut(s) 113, 1484
MalI GATC 6 cut(s) 430, 528, 1300, 1305, 1335, 1339
MboI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
MboII GAAGA 8 cut(s) 423, 446, 482, 493, 725, 1205, 1562, 1661
MfeI CAATTG 1 cut(s) 78
MflI RGATCY 2 cut(s) 428, 1298
MhlI GDGCHC 1 cut(s) 258
Mly113I GGCGCC 1 cut(s) 1621
MroXI GAANNNNTTC 1 cut(s) 905
MseI TTAA 4 cut(s) 66, 318, 624, 1656
MslI CAYNNNNRTG 1 cut(s) 885
MspA1I CMGCKG 4 cut(s) 146, 541, 1047, 1331
MspCI CTTAAG 1 cut(s) 623
MspI CCGG 3 cut(s) 124, 532, 1701
MspR9I CCNGG 4 cut(s) 492, 1151, 1617, 1662
MunI CAATTG 1 cut(s) 78
Mva1269I GAATGC 2 cut(s) 64, 873
MvaI CCWGG 4 cut(s) 492, 1151, 1617, 1662
MvnI CGCG 1 cut(s) 1380
MwoI GCNNNNNNNGC 9 cut(s) 80, 140, 149, 253, 391, 395, 950, 1241, 1421
NarI GGCGCC 1 cut(s) 1621
NdeII GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
NlaIII CATG 6 cut(s) 347, 866, 1172, 1407, 1415, 1437
NlaIV GGNNCC 5 cut(s) 257, 536, 643, 1360, 1622
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 1 cut(s) 113
NsbI TGCGCA 1 cut(s) 246
OliI CACNNNNGTG 1 cut(s) 885
PctI GAATGC 2 cut(s) 64, 873
PdmI GAANNNNTTC 1 cut(s) 905
PfeI GAWTC 5 cut(s) 615, 1120, 1165, 1603, 1731
PinAI ACCGGT 1 cut(s) 531
PluTI GGCGCC 1 cut(s) 1624
PpuMI RGGWCCY 1 cut(s) 1291
PshBI ATTAAT 2 cut(s) 318, 1656
PsiI TTATAA 1 cut(s) 1710
Psp5II RGGWCCY 1 cut(s) 1291
Psp6I CCWGG 4 cut(s) 490, 1149, 1615, 1660
PspFI CCCAGC 1 cut(s) 1047
PspGI CCWGG 4 cut(s) 490, 1149, 1615, 1660
PspN4I GGNNCC 5 cut(s) 257, 536, 643, 1360, 1622
PspPI GGNCC 2 cut(s) 521, 1291
PspPPI RGGWCCY 1 cut(s) 1291
PstI CTGCAG 1 cut(s) 1480
PstNI CAGNNNCTG 1 cut(s) 1689
PsuI RGATCY 2 cut(s) 428, 1298
PvuII CAGCTG 1 cut(s) 1331
RsaI GTAC 3 cut(s) 128, 861, 1677
RsaNI GTAC 3 cut(s) 127, 860, 1676
RseI CAYNNNNRTG 1 cut(s) 885
SaqAI TTAA 4 cut(s) 66, 318, 624, 1656
Sau3AI GATC 6 cut(s) 428, 526, 1298, 1303, 1333, 1337
Sau96I GGNCC 2 cut(s) 521, 1291
ScrFI CCNGG 4 cut(s) 492, 1151, 1617, 1662
SduI GDGCHC 1 cut(s) 258
SfaNI GCATC 4 cut(s) 507, 658, 1000, 1286
SfcI CTRYAG 1 cut(s) 1476
SfoI GGCGCC 1 cut(s) 1622
SinI GGWCC 2 cut(s) 521, 1291
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 2 cut(s) 623, 883
SmoI CTYRAG 2 cut(s) 623, 883
SsiI CCGC 6 cut(s) 146, 234, 307, 541, 1045, 1378
SspDI GGCGCC 1 cut(s) 1620
SspI AATATT 2 cut(s) 1099, 1354
SspMI CTAG 1 cut(s) 764
StyD4I CCNGG 4 cut(s) 490, 1149, 1615, 1660
StyI CCWWGG 2 cut(s) 158, 917
TaaI ACNGT 3 cut(s) 467, 1490, 1675
TaiI ACGT 2 cut(s) 304, 1681
TaqI TCGA 2 cut(s) 1336, 1579
TatI WGTACW 1 cut(s) 859
TauI GCSGC 1 cut(s) 1380
TfiI GAWTC 5 cut(s) 615, 1120, 1165, 1603, 1731
Tru1I TTAA 4 cut(s) 66, 318, 624, 1656
Tru9I TTAA 4 cut(s) 66, 318, 624, 1656
TscAI CASTG 1 cut(s) 840
TseFI GTSAC 1 cut(s) 113
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 9 cut(s) 17, 341, 450, 552, 726, 785, 917, 1025, 1157
TspGWI ACGGA 1 cut(s) 1199
TspRI CASTG 1 cut(s) 840
Vha464I CTTAAG 1 cut(s) 623
VpaK11BI GGWCC 2 cut(s) 521, 1291
VspI ATTAAT 2 cut(s) 318, 1656
XapI RAATTY 4 cut(s) 845, 853, 905, 1313
XmiI GTMKAC 1 cut(s) 1609
XmnI GAANNNNTTC 1 cut(s) 905
XspI CTAG 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.