Rw6G027010

MuDR family transposase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000251
Physical Location & Seq
Forward (+)
50700606 .. 50702898
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G027010.1

Sequence Viewer

Length: 2169 bp
ATGGCAAATGATAATCTAATCATTGGGCAGAGTCGTGATTTTCCGTTGAGTCAGAATCCACAGCTGGGACTGGGGCATGATCACAGTATGATTATGGGCCAAAGTCATAATTTTGCACTGGGACAAACCCATGATCAGGATTTGGAAGGAGGGCATGGTACTAATGATGATAAGCAGGGTCTTAGAGATGCCCATGAGCATGGATTAGCTTATGACCAGACAAACGAACATGTGATAGCTCTACAAGATATACAGAATCTTGAAGAAGAAGAAGCTTTGGGGTTGGATCAGGATAATGATCTTGAACCCGATCAAGAGAATATTGATGTTAACAGCCATGATAGTGATCTTGGTCTTAGCGTGGTGAATCACGAGTTGGGTTTGATGGATAGTCATGAATTGGCTGTTGCGGAGAACCATGATCTTTCTGAAAATTTAGATTTAGAGATGGATCAAAATCAGCACATGAGTATTCTACCTGTCTCAGGCATGTCATTGGAGCAGTCTGAGAGTATGGATAGTCCTCCTGTTCTTCAGTGTCGAGCGCTAGCTAATTCTAATCACCAGCTGGCTGTTGGGCAAGAGTTTCCTGATGTCCAGAGCTGTCGAAGGGCACTTAGAGATGCAGCTATTGCTCTTCACTTTGAGATACAGACAGTCAAGTCTGATAAAACTCGTTTCACTGCCAAATGTGCAAGTGAAGGATGCTCTTGGCGAATTCATGCTGCAAAGCTTCCAGGTGTGCCTACCTTCTCAATAAGGACCATTCATGAAGAACACACTTGTCGTGGAATCACCCATCTTGGTCATCAGCAAGCCTCCGTCCAGTGGGTGGCAAATACTGTGGAACAACGCTTGAGGGAGAATCCTAATTGCAAGCCAAAAGAGATACTAGAAGAGATCCACCGCGTTCATGGGATTGCGTTAACATATAAGCAGGCATGGAGGGGGAAGGAACGGCTCATGGCTGCTGTTCGTGGATCTTTTGAAGAAGATTATCGCCTCCTTCCTCAATATTGTGAACAGATCAGAAGGACCAATCCAGGAAGTATTGCCCAGGTTTATGGGAATCCTGATGATAACTCCTTCCAACGTTATTTAGGAGCTTTATTTCCATTGGCATTTGGAGTGGTGGATGAAGAGAACGATGAGAATTGGATGTGGTTCCTCTCCGAGATTCGGGTCCTACTAGAAAATTATGCAGAGTACATGCCAAGGCTTACAATTTTGTCTGATAGGCGGCAGGGTATTGTCGATGGAGTGGAAGCAAACTTCCCAACTGCTTTTCATGGGTTTTGTTTGCAGCATTTAAGCGACAGTTTACGGAAGGAATTTAATAGTACTCCGCTTGTTAATCTTCTATGGGAGGCTGCTTATGCTCTTACTCACTTCGAATGTGAACAAAAAATTATGGAGATTGAAGAGATCTCTCCGGAAGCAGCCCAATGGATTAGACAAATTGCACCAACATTGTGGGCAACAGCATATTTTGAGGGTACAAGGTTTGGACAGTTGACGGCTAATTGGGCCGAATCTTTAAATTCTTGGATAGCAGAGGCATCTGGGCTTCCAATAATTCAGTTGATGGAGTGTATCCGACGACATCTGATGACTTGGTTCAATGAGCGTCGTGAAATGAGCATGCAGTGGACAAACATACTTGTTCCTTCTGCTGAAAGCTCTGTGACAAAGGCAGTTGAGCTTTCTCACCCATTCAATGCTTTCCGTGGAAATGATGCTGATTTCGAAGTTAGGTTCCCTGAAGGATCACATATAGTGGATATTCGTAACCGTAGGTGTACATGTAATGGATGGCAGTTCTGTGGGTTGCCATGTTCTCATGCTGTGGCAGCTCTCCGCTCTTGTGGGCAGAATGTGTTTCGGTTCACTGAAAGTTGTTTCACTGTGACAAATTATCGCAAAGCCTACTCGGAGACAATACATCCTATTCCAGACAGAACTCTTTGGAAGGAGATGGCTGGATTTGAAGATGAAGCCAATGGAAGTTTATGGGTCACGATTAACCCACCAAAGTCGCTTCGGCCACCCAGCCGACCAAGGAAAAGGCGAATTCGCGCAGAAGATGCTGGTCGTGCTAAACGAGTGGTGCATTGCAGCCGCTGCAATCAGACTGGACATTTTCGAACAACTTGTTCAGCTCCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

722

Amino Acids

81.98

Weight (kDa)

5.4

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 188 - 253 2.1e-26 MuDR family transposase
MULE PF10551 368 - 438 4e-11 MULE transposase domain
SWIM PF04434 593 - 623 1.5e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 661
AccB7I CCANNNNNTGG 1 cut(s) 832
AccBSI CCGCTC 1 cut(s) 1860
AccII CGCG 2 cut(s) 909, 2076
AccIII TCCGGA 1 cut(s) 1432
AciI CCGC 6 cut(s) 410, 907, 1240, 1346, 1858, 2119
AclI AACGTT 1 cut(s) 1093
AclWI GGATC 5 cut(s) 294, 459, 895, 988, 1774
AcoI YGGCCR 1 cut(s) 2042
AcsI RAATTY 5 cut(s) 433, 717, 1331, 1540, 2070
AcuI CTGAAG 2 cut(s) 518, 1782
AfaI GTAC 5 cut(s) 160, 1208, 1342, 1498, 1801
AfeI AGCGCT 1 cut(s) 546
AfiI CCNNNNNNNGG 6 cut(s) 65, 136, 485, 828, 832, 1179
AflIII ACRYGT 2 cut(s) 229, 1802
AgsI TTSAA 7 cut(s) 263, 305, 989, 1421, 1621, 1717, 1988
AjnI CCWGG 3 cut(s) 736, 1042, 1056
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
Alw26I GTCTC 2 cut(s) 487, 1928
AlwI GGATC 5 cut(s) 294, 459, 895, 988, 1774
AlwNI CAGNNNCTG 1 cut(s) 2121
Aor13HI TCCGGA 1 cut(s) 1432
Aor51HI AGCGCT 1 cut(s) 546
AoxI GGCC 3 cut(s) 97, 1527, 2042
ApeKI GCWGC 9 cut(s) 626, 725, 968, 1303, 1370, 1439, 1850, 2115, 2121
ApoI RAATTY 5 cut(s) 433, 717, 1331, 1540, 2070
AspLEI GCGC 2 cut(s) 547, 2078
AspS9I GGNCC 5 cut(s) 97, 762, 1035, 1183, 1527
AsuHPI GGTGA 4 cut(s) 376, 554, 787, 1700
AsuII TTCGAA 3 cut(s) 1392, 1746, 2143
AsuNHI GCTAGC 1 cut(s) 547
AvaII GGWCC 3 cut(s) 762, 1035, 1183
BaeGI GKGCMC 1 cut(s) 616
BauI CACGAG 1 cut(s) 371
BbvI GCAGC 9 cut(s) 638, 712, 955, 1315, 1357, 1451, 1862, 2108, 2127
BccI CCATC 7 cut(s) 379, 442, 807, 1250, 1579, 1806, 1969
BceAI ACGGC 2 cut(s) 974, 1533
BciT130I CCWGG 3 cut(s) 738, 1044, 1058
BciVI GTATCC 1 cut(s) 1604
BclI TGATCA 2 cut(s) 79, 133
BcoDI GTCTC 2 cut(s) 487, 1928
BfaI CTAG 3 cut(s) 548, 893, 1190
BfoI RGCGCY 1 cut(s) 548
BfuI GTATCC 1 cut(s) 1604
BglII AGATCT 1 cut(s) 1425
BmcAI AGTACT 1 cut(s) 1342
Bme1390I CCNGG 3 cut(s) 738, 1044, 1058
Bme18I GGWCC 3 cut(s) 762, 1035, 1183
BmgT120I GGNCC 5 cut(s) 97, 762, 1035, 1183, 1527
BmiI GGNNCC 3 cut(s) 1166, 1184, 1757
BmrFI CCNGG 3 cut(s) 738, 1044, 1058
BmrI ACTGGG 2 cut(s) 80, 128
BmsI GCATC 6 cut(s) 178, 613, 695, 1568, 1726, 2074
BmtI GCTAGC 1 cut(s) 551
BmuI ACTGGG 2 cut(s) 80, 128
Bpu14I TTCGAA 3 cut(s) 1392, 1746, 2143
BpuEI CTTGAG 1 cut(s) 877
BsaBI GATNNNNATC 3 cut(s) 297, 345, 456
BsaJI CCNNGG 4 cut(s) 1056, 1214, 1726, 2057
BsaWI WCCGGW 1 cut(s) 1432
Bsc4I CCNNNNNNNGG 6 cut(s) 65, 136, 485, 828, 832, 1179
Bse1I ACTGG 4 cut(s) 75, 123, 826, 2137
Bse3DI GCAATG 1 cut(s) 2110
Bse8I GATNNNNATC 3 cut(s) 297, 345, 456
BseAI TCCGGA 1 cut(s) 1432
BseBI CCWGG 3 cut(s) 738, 1044, 1058
BseDI CCNNGG 4 cut(s) 1056, 1214, 1726, 2057
BseGI GGATG 5 cut(s) 710, 1141, 1164, 1817, 1942
BseJI GATNNNNATC 3 cut(s) 297, 345, 456
BseLI CCNNNNNNNGG 6 cut(s) 65, 136, 485, 828, 832, 1179
BseMI GCAATG 1 cut(s) 2110
BseMII CTCAG 2 cut(s) 498, 498
BseNI ACTGG 4 cut(s) 75, 123, 826, 2137
BseSI GKGCMC 1 cut(s) 616
BseXI GCAGC 9 cut(s) 638, 712, 955, 1315, 1357, 1451, 1862, 2108, 2127
BseYI CCCAGC 2 cut(s) 64, 2048
Bsh1236I CGCG 2 cut(s) 909, 2076
BshFI GGCC 3 cut(s) 99, 1529, 2044
BsiSI CCGG 1 cut(s) 1433
BslFI GGGAC 2 cut(s) 81, 135
BslI CCNNNNNNNGG 6 cut(s) 65, 136, 485, 828, 832, 1179
BsmAI GTCTC 2 cut(s) 487, 1928
BsmFI GGGAC 2 cut(s) 81, 135
BsnI GGCC 3 cut(s) 99, 1529, 2044
Bsp119I TTCGAA 3 cut(s) 1392, 1746, 2143
Bsp1286I GDGCHC 1 cut(s) 616
Bsp13I TCCGGA 1 cut(s) 1432
Bsp1407I TGTACA 1 cut(s) 1799
BspACI CCGC 6 cut(s) 410, 907, 1240, 1346, 1858, 2119
BspANI GGCC 3 cut(s) 99, 1529, 2044
BspCNI CTCAG 2 cut(s) 497, 499
BspEI TCCGGA 1 cut(s) 1432
BspFNI CGCG 2 cut(s) 909, 2076
BspHI TCATGA 2 cut(s) 394, 769
BspLI GGNNCC 3 cut(s) 1166, 1184, 1757
BspOI GCTAGC 1 cut(s) 551
BspPI GGATC 5 cut(s) 294, 459, 895, 988, 1774
BspQI GCTCTTC 1 cut(s) 642
BspT104I TTCGAA 3 cut(s) 1392, 1746, 2143
BsrBI CCGCTC 1 cut(s) 1860
BsrDI GCAATG 1 cut(s) 2110
BsrGI TGTACA 1 cut(s) 1799
BsrI ACTGG 4 cut(s) 75, 123, 826, 2137
BssECI CCNNGG 4 cut(s) 1056, 1214, 1726, 2057
BssSI CACGAG 1 cut(s) 371
BssT1I CCWWGG 2 cut(s) 1214, 2057
Bst2BI CACGAG 1 cut(s) 371
Bst2UI CCWGG 3 cut(s) 738, 1044, 1058
Bst4CI ACNGT 7 cut(s) 86, 658, 844, 1319, 1512, 1793, 1906
Bst6I CTCTTC 4 cut(s) 642, 891, 1134, 1416
BstAPI GCANNNNNTGC 3 cut(s) 632, 2084, 2121
BstAUI TGTACA 1 cut(s) 1799
BstBI TTCGAA 3 cut(s) 1392, 1746, 2143
BstC8I GCNNGC 6 cut(s) 549, 570, 816, 878, 939, 1643
BstDEI CTNAG 5 cut(s) 182, 356, 484, 507, 617
BstDSI CCRYGG 1 cut(s) 1726
BstENI CCTNNNNNAGG 1 cut(s) 483
BstF5I GGATG 5 cut(s) 710, 1141, 1164, 1817, 1942
BstFNI CGCG 2 cut(s) 909, 2076
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 2 cut(s) 547, 2078
BstMAI GTCTC 2 cut(s) 487, 1928
BstMWI GCNNNNNNNGC 8 cut(s) 632, 692, 1376, 1526, 1850, 2084, 2093, 2121
BstNI CCWGG 3 cut(s) 738, 1044, 1058
BstNSI RCATGY 5 cut(s) 233, 493, 1213, 1645, 1806
BstSCI CCNGG 3 cut(s) 736, 1042, 1056
BstSLI GKGCMC 1 cut(s) 616
BstUI CGCG 2 cut(s) 909, 2076
BstV1I GCAGC 9 cut(s) 638, 712, 955, 1315, 1357, 1451, 1862, 2108, 2127
BstX2I RGATCY 3 cut(s) 900, 980, 1425
BstXI CCANNNNNNTGG 3 cut(s) 200, 1064, 1473
BstYI RGATCY 3 cut(s) 900, 980, 1425
BsuI GTATCC 1 cut(s) 1604
BsuRI GGCC 3 cut(s) 99, 1529, 2044
BtgI CCRYGG 1 cut(s) 1726
BtsCI GGATG 5 cut(s) 710, 1141, 1164, 1817, 1942
BtsI GCAGTG 2 cut(s) 681, 1652
BtsIMutI CAGTG 7 cut(s) 116, 542, 681, 833, 1652, 1887, 1902
Cac8I GCNNGC 6 cut(s) 549, 570, 816, 878, 939, 1643
CaiI CAGNNNCTG 1 cut(s) 2121
CciI TCATGA 2 cut(s) 394, 769
CfoI GCGC 2 cut(s) 547, 2078
Cfr13I GGNCC 5 cut(s) 97, 762, 1035, 1183, 1527
CseI GACGC 1 cut(s) 1616
Csp6I GTAC 5 cut(s) 159, 1207, 1341, 1497, 1800
CspCI CAANNNNNGTGG 2 cut(s) 825, 860
CviQI GTAC 5 cut(s) 159, 1207, 1341, 1497, 1800
DdeI CTNAG 5 cut(s) 182, 356, 484, 507, 617
DraI TTTAAA 1 cut(s) 1539
DrdI GACNNNNNNGTC 1 cut(s) 661
DseDI GACNNNNNNGTC 1 cut(s) 661
EaeI YGGCCR 1 cut(s) 2042
Eam1104I CTCTTC 4 cut(s) 642, 891, 1134, 1416
EarI CTCTTC 4 cut(s) 642, 891, 1134, 1416
Eco130I CCWWGG 2 cut(s) 1214, 2057
Eco47I GGWCC 3 cut(s) 762, 1035, 1183
Eco47III AGCGCT 1 cut(s) 546
Eco57I CTGAAG 2 cut(s) 518, 1782
EcoNI CCTNNNNNAGG 1 cut(s) 483
EcoO109I RGGNCCY 1 cut(s) 1183
EcoRI GAATTC 2 cut(s) 717, 2070
EcoRII CCWGG 3 cut(s) 736, 1042, 1056
EcoT14I CCWWGG 2 cut(s) 1214, 2057
ErhI CCWWGG 2 cut(s) 1214, 2057
FaqI GGGAC 2 cut(s) 81, 135
FbaI TGATCA 2 cut(s) 79, 133
FokI GGATG 5 cut(s) 717, 1148, 1171, 1824, 1929
FspBI CTAG 3 cut(s) 548, 893, 1190
GlaI GCGC 2 cut(s) 546, 2077
GsaI CCCAGC 2 cut(s) 68, 2052
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 3 cut(s) 99, 1529, 2044
HapII CCGG 1 cut(s) 1433
HgaI GACGC 1 cut(s) 1616
HhaI GCGC 2 cut(s) 547, 2078
Hin6I GCGC 2 cut(s) 545, 2076
HinP1I GCGC 2 cut(s) 545, 2076
HincII GTYRAC 3 cut(s) 331, 927, 1515
HindII GTYRAC 3 cut(s) 331, 927, 1515
HindIII AAGCTT 2 cut(s) 273, 731
HpaI GTTAAC 2 cut(s) 331, 927
HpaII CCGG 1 cut(s) 1433
HphI GGTGA 4 cut(s) 376, 554, 787, 1700
Hpy166II GTNNAC 9 cut(s) 331, 927, 1022, 1322, 1400, 1515, 1650, 1800, 1887
Hpy8I GTNNAC 9 cut(s) 331, 927, 1022, 1322, 1400, 1515, 1650, 1800, 1887
Hpy99I CGWCG 2 cut(s) 1602, 1632
HpyCH4III ACNGT 7 cut(s) 86, 658, 844, 1319, 1512, 1793, 1906
HpyCH4IV ACGT 1 cut(s) 1093
HpyF10VI GCNNNNNNNGC 8 cut(s) 632, 692, 1376, 1526, 1850, 2084, 2093, 2121
HpyF3I CTNAG 5 cut(s) 182, 356, 484, 507, 617
HpySE526I ACGT 1 cut(s) 1093
HspAI GCGC 2 cut(s) 545, 2076
Kpn2I TCCGGA 1 cut(s) 1432
Ksp22I TGATCA 2 cut(s) 79, 133
KspAI GTTAAC 2 cut(s) 331, 927
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 3 cut(s) 499, 1103, 2164
Lsp1109I GCAGC 9 cut(s) 638, 712, 955, 1315, 1357, 1451, 1862, 2108, 2127
LweI GCATC 6 cut(s) 178, 613, 695, 1568, 1726, 2074
MaeI CTAG 3 cut(s) 548, 893, 1190
MaeII ACGT 1 cut(s) 1093
MaeIII GTNAC 4 cut(s) 1684, 1787, 1906, 2014
MbiI CCGCTC 1 cut(s) 1860
MflI RGATCY 3 cut(s) 900, 980, 1425
MhlI GDGCHC 1 cut(s) 616
MlyI GAGTC 2 cut(s) 40, 58
MmeI TCCRAC 3 cut(s) 264, 1114, 1621
MroI TCCGGA 1 cut(s) 1432
MseI TTAA 7 cut(s) 330, 926, 1310, 1335, 1353, 1538, 2022
MslI CAYNNNNRTG 2 cut(s) 198, 342
MspA1I CMGCKG 3 cut(s) 64, 568, 2121
MspI CCGG 1 cut(s) 1433
MspR9I CCNGG 3 cut(s) 738, 1044, 1058
MvaI CCWGG 3 cut(s) 738, 1044, 1058
MvnI CGCG 2 cut(s) 909, 2076
MwoI GCNNNNNNNGC 8 cut(s) 632, 692, 1376, 1526, 1850, 2084, 2093, 2121
NheI GCTAGC 1 cut(s) 547
NlaIV GGNNCC 3 cut(s) 1166, 1184, 1757
NmuCI GTSAC 3 cut(s) 1684, 1906, 2014
NspI RCATGY 5 cut(s) 233, 493, 1213, 1645, 1806
NspV TTCGAA 3 cut(s) 1392, 1746, 2143
PaeI GCATGC 1 cut(s) 1645
PagI TCATGA 2 cut(s) 394, 769
PciI ACATGT 2 cut(s) 229, 1802
PciSI GCTCTTC 1 cut(s) 642
PcsI WCGNNNNNNNCGW 1 cut(s) 2098
PfeI GAWTC 8 cut(s) 55, 256, 367, 792, 865, 1069, 1177, 1532
PflMI CCANNNNNTGG 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 1042
PleI GAGTC 2 cut(s) 39, 57
PpsI GAGTC 2 cut(s) 39, 57
PpuMI RGGWCCY 1 cut(s) 1183
PscI ACATGT 2 cut(s) 229, 1802
Psp1406I AACGTT 1 cut(s) 1093
Psp5II RGGWCCY 1 cut(s) 1183
Psp6I CCWGG 3 cut(s) 736, 1042, 1056
PspFI CCCAGC 2 cut(s) 64, 2048
PspGI CCWGG 3 cut(s) 736, 1042, 1056
PspN4I GGNNCC 3 cut(s) 1166, 1184, 1757
PspPI GGNCC 5 cut(s) 97, 762, 1035, 1183, 1527
PspPPI RGGWCCY 1 cut(s) 1183
PstNI CAGNNNCTG 1 cut(s) 2121
PsuI RGATCY 3 cut(s) 900, 980, 1425
PvuII CAGCTG 2 cut(s) 64, 568
RsaI GTAC 5 cut(s) 160, 1208, 1342, 1498, 1801
RsaNI GTAC 5 cut(s) 159, 1207, 1341, 1497, 1800
RseI CAYNNNNRTG 2 cut(s) 198, 342
SapI GCTCTTC 1 cut(s) 642
SaqAI TTAA 7 cut(s) 330, 926, 1310, 1335, 1353, 1538, 2022
Sau96I GGNCC 5 cut(s) 97, 762, 1035, 1183, 1527
ScaI AGTACT 1 cut(s) 1342
SchI GAGTC 2 cut(s) 40, 58
ScrFI CCNGG 3 cut(s) 738, 1044, 1058
SduI GDGCHC 1 cut(s) 616
SfaNI GCATC 6 cut(s) 178, 613, 695, 1568, 1726, 2074
SfuI TTCGAA 3 cut(s) 1392, 1746, 2143
SinI GGWCC 3 cut(s) 762, 1035, 1183
SmiMI CAYNNNNRTG 2 cut(s) 198, 342
SmlI CTYRAG 1 cut(s) 856
SmoI CTYRAG 1 cut(s) 856
SphI GCATGC 1 cut(s) 1645
SsiI CCGC 6 cut(s) 410, 907, 1240, 1346, 1858, 2119
SspI AATATT 2 cut(s) 322, 1016
SspMI CTAG 3 cut(s) 548, 893, 1190
StyD4I CCNGG 3 cut(s) 736, 1042, 1056
StyI CCWWGG 2 cut(s) 1214, 2057
TaaI ACNGT 7 cut(s) 86, 658, 844, 1319, 1512, 1793, 1906
TaiI ACGT 1 cut(s) 1096
TaqI TCGA 6 cut(s) 541, 607, 1254, 1392, 1746, 2143
TatI WGTACW 3 cut(s) 1206, 1340, 1799
TauI GCSGC 2 cut(s) 1243, 2121
TfiI GAWTC 8 cut(s) 55, 256, 367, 792, 865, 1069, 1177, 1532
Tru1I TTAA 7 cut(s) 330, 926, 1310, 1335, 1353, 1538, 2022
Tru9I TTAA 7 cut(s) 330, 926, 1310, 1335, 1353, 1538, 2022
TscAI CASTG 7 cut(s) 123, 542, 688, 833, 1652, 1894, 1909
TseFI GTSAC 3 cut(s) 1684, 1906, 2014
TseI GCWGC 9 cut(s) 626, 725, 968, 1303, 1370, 1439, 1850, 2115, 2121
Tsp45I GTSAC 3 cut(s) 1684, 1906, 2014
TspDTI ATGAA 8 cut(s) 411, 710, 758, 786, 902, 1152, 1277, 2007
TspGWI ACGGA 4 cut(s) 33, 811, 1339, 1715
TspRI CASTG 7 cut(s) 123, 542, 688, 833, 1652, 1894, 1909
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 3 cut(s) 762, 1035, 1183
XagI CCTNNNNNAGG 1 cut(s) 483
XapI RAATTY 5 cut(s) 433, 717, 1331, 1540, 2070
XceI RCATGY 5 cut(s) 233, 493, 1213, 1645, 1806
XcmI CCANNNNNNNNNTGG 2 cut(s) 572, 911
XspI CTAG 3 cut(s) 548, 893, 1190
ZrmI AGTACT 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.