FvH4_2g02692

plant mutator transposase zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000251
Physical Location & Seq
Forward (+)
2154417 .. 2156845
2429 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g02692.t1

Sequence Viewer

Length: 1749 bp
ATGGAGGAGGATGAGGAGGAGACATTTTTTGTTGGTCAGGAGTTCCCTGATGTCAAGGTCTTTAGGAATGCGATTAAAGAAGCAGCAATTGCACAGCACTTTGAGCTTCGTATAATAAAGAGTGATCTTATCCGCTACTTTGCCAAGTGTGCTGCTGAGGCTTGTCCTTGGCGCATTCGTGCTGTGAAGCTTCCTAATGCCCCGACATTTGCGATAAGAAGTCTGGAAGGGAAGCACACTTGTGGTAGAAATGCACTCAATGGGCACCATCAGGCGTCTATTGATTGGATAGTCAGTTTTATTGAGCAACGTCTGCGGGATAACATTAATTACAAGCCAAAGGATATATTGCATGATATCCATCAGCAATATGGGATTACCATACCATATAAGCAGGCTTGGCGTGCAAAGGAACGGGGACTTGCTGCGATATATGGATCTTCCGAGGAAGGGTATTGCCTTCTTCCTTTGTACTGTGATGAAATAAAGAAGACCAACCGTGGTAGCATTGCTGAGGTGTTTACTACTGGTCCAGATCACCGGTTCCAGCGATTATTTGTTTCCTTTTATTCATCCATTTATGGATTTCTGAATGGTTGTTTGCCCGTTATTGGGCTTGGTGGAATCCATCTTAAGAGCAAATATCTGGGTACTTTACTTTCTGCAACTTCTTTCGATGCTGAGGGGGCTTTATTTCCACTTGCATTCGGTGTTGTTGATGAAGAAAATGATGAGAGCTGGATGTGGTTCTTGTCAGAGTTGCACAAGGCACTAGAGATGAACACCCCAGATATGCCACAGTTCACATTTATATCGGAGACACAGAAGGGCATTGCAGATGCAGTGAGAAGGAAATTCCCACATTCTGTACATGATATTTGCATTCGCCACTTGAGTGAAAGCATTGGAAAAGAATTCAAGAACCCAAGGCTCGTACATCTGTTATGGAAAGCTGCACAAGCCACTACTACCATTGGTTTCAAAGAAAAAATGGCTGAAATAGAGGAGGTATCTTTGGATGCTGCAAAATGGCTACAACAATTTCATCCTTCCCGCTGGGCATTCATGTATTTTGAAGGAACTCGTTATGGTCATTTCTCATCAAATATTGAGGAGTTCAATAAATGGATTCTGGAAGCTCGTGAACTGCCTGTAATTCAGGTGATTGAGAGGATTCATGGTAAATTGATGACAGAGTTTGAAGAACGGCGGAAGCAAAGTAATTCTTGGTTTTCCTTCCTTGCTCCATCTGCTGAGAACTATATTTTAGAAGCCATCAGCCGTGCATCCACATATCAGGTCCTTCGATCAGATCAAGTTGAATTTGAGATCCTCTCAGCTGATCGATCAGACATTGTGAATATTGGAACCCGTTGTTGTTCCTGCCGCGATTGGCAGCTATATGGTTTACCATGTTCCCATGCTGTTGCTGCCCTCATCTCATGTCGGAAAGATGTATATGCCTTTACAGAGAGATGTTTTACTGCAGCAAGTTACCGTGAGACGTATGCTGGAGCGATAAATCCTATTGAAGCAAAACCTCGATGGGTAAAGACAGAAGAGGCTGCAATGACTGATGATGATGATACTCGAGTTTTTGTACGACCCCCAAAGATTCGTAGACTGCCAGGGCGCCCCGAAAAGAAACGGATTTGTGTAGAGGACATTAATCCAGGCAAACATACTGTACGTTGCAGTCTGTGTAACCAAACTGGACATTATAAGACAACCTGCAAAGAGAGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DBD_Tnp_Mut MULE SWIM

Protein Analysis

583

Amino Acids

66.9

Weight (kDa)

7.26

Isoelectric Point (pI)

47.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 9 - 72 1.3e-22 MuDR family transposase
MULE PF10551 204 - 299 4.3e-17 MULE transposase domain
SWIM PF04434 453 - 482 1.5e-10 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000251)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06740
fragaria_vesca FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_1g02210 FvH4_2g02692 FvH4_2g22241 FvH4_2g22241 FvH4_2g22241 FvH4_4g21561 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g01063 FvH4_6g02501 FvH4_6g02501
malus_domestica MD02G1020500.v1.1 MD04G1227400.v1.1 MD04G1236400.v1.1 MD05G1203600.v1.1 MD10G1190900.v1.1 MD12G1244100.v1.1 MD12G1255700.v1.1 MD13G1140100.v1.1 MD15G1396600.v1.1 MD16G1135600.v1.1
prunus_persica Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.1G104800_v2.0.a1 Prupe.6G346500_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.6G356400_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.7G251000_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G156200_v2.0.a1 Prupe.8G229900_v2.0.a1 Prupe.8G229900_v2.0.a1
pyrus_communis pycom02g01800 pycom02g16220 pycom04g20090 pycom04g21020 pycom04g21030 pycom05g19010 pycom10g16460 pycom12g18690 pycom12g22380 pycom12g23430 pycom13g12180 pycom15g14690 pycom15g23420 pycom15g35670 pycom16g11960
rosa_chinensis RchiOBHm_Chr2g0087301 RchiOBHm_Chr3g0448611 RchiOBHm_Chr3g0450381 RchiOBHm_Chr4g0427621 RchiOBHm_Chr6g0247111 RchiOBHm_Chr6g0289171 RchiOBHm_Chr7g0177141
rosa_laevigata RLG00000007221 RLG00000015852
rosa_multiflora Rmu_co8326617.1_g000001 Rmu_sc0003399.1_g000010
rosa_roxburghii Rroxscaffold_2G00153730 Rroxscaffold_5G00369250 Rroxscaffold_6G00426900 Rroxscaffold_6G00428110 Rroxscaffold_7G00179510 Rroxscaffold_7G00214340
rosa_rugosa Rorug01G0473800 Rorug01G0473900 Rorug01G0474000 Rorug02G0614200 Rorug02G0614300 Rorug02G0614400 Rorug02G0614500 Rorug02G0614600 Rorug02G0627200 Rorug02G0627300 Rorug02G0627400 Rorug02G0627500 Rorug05G0522400
rosa_samantha Rh2AG027500 Rh2BG026800 Rh2CG027900 Rh2DG027500 Rh3AG013600 Rh3AG027900 Rh3BG013400 Rh3BG028400 Rh3CG012500 Rh3CG027200 Rh3DG014200 Rh3DG028300 Rh4AG275400 Rh4BG281300 Rh4CG296600 Rh4DG278600 Rh6AG037400 Rh6AG037700 Rh6AG312600 Rh6BG032300 Rh6BG032600 Rh6BG319500 Rh6CG033400 Rh6CG326000 Rh6DG031100 Rh6DG311900 Rh7AG003400 Rh7CG003000 Rh7CG003100
rosa_wichuraiana Rw2G002170 Rw3G001000 Rw3G002170 Rw4G023880 Rw6G003210 Rw6G027010 Rw7G000280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1722
Acc36I ACCTGC 1 cut(s) 1739
AccB1I GGYRCC 2 cut(s) 264, 1632
AccI GTMKAC 1 cut(s) 1621
AccII CGCG 1 cut(s) 1389
AciI CCGC 5 cut(s) 133, 316, 1054, 1210, 1387
AclWI GGATC 2 cut(s) 445, 1324
AcsI RAATTY 3 cut(s) 854, 914, 1322
AcyI GRCGYC 2 cut(s) 275, 1633
AfaI GTAC 6 cut(s) 473, 652, 870, 936, 1602, 1689
AfiI CCNNNNNNNGG 3 cut(s) 450, 611, 612
AflII CTTAAG 1 cut(s) 632
AgeI ACCGGT 1 cut(s) 540
AgsI TTSAA 7 cut(s) 919, 982, 1076, 1120, 1202, 1322, 1532
AjnI CCWGG 2 cut(s) 1627, 1672
AleI CACNNNNGTG 2 cut(s) 240, 894
AluBI AGCT 7 cut(s) 106, 190, 738, 953, 1139, 1340, 1399
AluI AGCT 7 cut(s) 106, 190, 738, 953, 1139, 1340, 1399
Alw26I GTCTC 3 cut(s) 14, 812, 1496
AlwI GGATC 2 cut(s) 445, 1324
Ama87I CYCGRG 1 cut(s) 1590
ApeKI GCWGC 9 cut(s) 83, 152, 425, 953, 1022, 1396, 1430, 1487, 1565
ApoI RAATTY 3 cut(s) 854, 914, 1322
AseI ATTAAT 2 cut(s) 327, 1668
AsiGI ACCGGT 1 cut(s) 540
AspLEI GCGC 2 cut(s) 174, 1635
AspS9I GGNCC 2 cut(s) 530, 1300
AsuHPI GGTGA 2 cut(s) 530, 1174
AvaI CYCGRG 1 cut(s) 1590
AvaII GGWCC 2 cut(s) 530, 1300
BaeGI GKGCMC 1 cut(s) 267
BaeI ACNNNNGTAYC 2 cut(s) 1578, 1611
BanI GGYRCC 2 cut(s) 264, 1632
BauI CACGAG 1 cut(s) 1140
BbsI GAAGAC 1 cut(s) 497
BbvCI CCTCAGC 3 cut(s) 156, 513, 681
BbvI GCAGC 9 cut(s) 95, 139, 412, 940, 1009, 1408, 1417, 1499, 1552
BccI CCATC 6 cut(s) 276, 369, 636, 1255, 1283, 1539
BceAI ACGGC 2 cut(s) 1223, 1266
BciT130I CCWGG 2 cut(s) 1629, 1674
BcoDI GTCTC 3 cut(s) 14, 812, 1496
BfaI CTAG 1 cut(s) 773
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 1 cut(s) 1636
BfrI CTTAAG 1 cut(s) 632
BfuAI ACCTGC 1 cut(s) 1739
Bme1390I CCNGG 2 cut(s) 1629, 1674
Bme18I GGWCC 2 cut(s) 530, 1300
BmeT110I CYCGRG 1 cut(s) 1590
BmgT120I GGNCC 2 cut(s) 530, 1300
BmiI GGNNCC 4 cut(s) 266, 545, 1369, 1634
BmrFI CCNGG 2 cut(s) 1629, 1674
BmsI GCATC 4 cut(s) 667, 829, 1009, 1295
BpiI GAAGAC 1 cut(s) 497
BplI GAGNNNNNCTC 2 cut(s) 1319, 1351
BpmI CTGGAG 1 cut(s) 1533
Bpu10I CCTNAGC 3 cut(s) 156, 513, 681
BpuEI CTTGAG 1 cut(s) 913
Bsa29I ATCGAT 1 cut(s) 1345
BsaBI GATNNNNATC 1 cut(s) 360
BsaHI GRCGYC 2 cut(s) 275, 1633
BsaJI CCNNGG 5 cut(s) 167, 444, 499, 926, 1628
BsaWI WCCGGW 1 cut(s) 540
Bsc4I CCNNNNNNNGG 3 cut(s) 450, 611, 612
Bse118I RCCGGY 1 cut(s) 540
Bse1I ACTGG 2 cut(s) 532, 1717
Bse3DI GCAATG 3 cut(s) 507, 831, 1575
Bse8I GATNNNNATC 1 cut(s) 360
BseBI CCWGG 2 cut(s) 1629, 1674
BseCI ATCGAT 1 cut(s) 1345
BseDI CCNNGG 5 cut(s) 167, 444, 499, 926, 1628
BseGI GGATG 6 cut(s) 16, 572, 747, 1024, 1045, 1286
BseJI GATNNNNATC 1 cut(s) 360
BseLI CCNNNNNNNGG 3 cut(s) 450, 611, 612
BseMI GCAATG 3 cut(s) 507, 831, 1575
BseMII CTCAG 5 cut(s) 147, 504, 672, 1245, 1350
BseNI ACTGG 2 cut(s) 532, 1717
BseRI GAGGAG 5 cut(s) 20, 29, 32, 1019, 1127
BseSI GKGCMC 1 cut(s) 267
BseXI GCAGC 9 cut(s) 95, 139, 412, 940, 1009, 1408, 1417, 1499, 1552
BseYI CCCAGC 1 cut(s) 1056
BsgI GTGCAG 1 cut(s) 939
Bsh1236I CGCG 1 cut(s) 1389
BshNI GGYRCC 2 cut(s) 264, 1632
BshTI ACCGGT 1 cut(s) 540
BshVI ATCGAT 1 cut(s) 1345
BsiHKCI CYCGRG 1 cut(s) 1590
BsiSI CCGG 1 cut(s) 541
BslFI GGGAC 1 cut(s) 432
BslI CCNNNNNNNGG 3 cut(s) 450, 611, 612
BsmAI GTCTC 3 cut(s) 14, 812, 1496
BsmBI CGTCTC 1 cut(s) 1496
BsmFI GGGAC 1 cut(s) 432
BsmI GAATGC 5 cut(s) 73, 174, 704, 882, 1061
BsoBI CYCGRG 1 cut(s) 1590
Bsp1286I GDGCHC 1 cut(s) 267
Bsp1407I TGTACA 1 cut(s) 868
Bsp143I GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
BspACI CCGC 5 cut(s) 133, 316, 1054, 1210, 1387
BspCNI CTCAG 5 cut(s) 148, 505, 673, 1246, 1349
BspDI ATCGAT 1 cut(s) 1345
BspFNI CGCG 1 cut(s) 1389
BspLI GGNNCC 4 cut(s) 266, 545, 1369, 1634
BspMAI CTGCAG 1 cut(s) 1489
BspMI ACCTGC 1 cut(s) 1739
BspPI GGATC 2 cut(s) 445, 1324
BspT107I GGYRCC 2 cut(s) 264, 1632
BspTI CTTAAG 1 cut(s) 632
BsrDI GCAATG 3 cut(s) 507, 831, 1575
BsrFI RCCGGY 1 cut(s) 540
BsrGI TGTACA 1 cut(s) 868
BsrI ACTGG 2 cut(s) 532, 1717
BssAI RCCGGY 1 cut(s) 540
BssECI CCNNGG 5 cut(s) 167, 444, 499, 926, 1628
BssMI GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
BssNI GRCGYC 2 cut(s) 275, 1633
BssSI CACGAG 1 cut(s) 1140
BssT1I CCWWGG 2 cut(s) 167, 926
Bst2BI CACGAG 1 cut(s) 1140
Bst2UI CCWGG 2 cut(s) 1629, 1674
Bst4CI ACNGT 5 cut(s) 476, 500, 801, 1499, 1687
Bst6I CTCTTC 1 cut(s) 1554
BstACI GRCGYC 2 cut(s) 275, 1633
BstAFI CTTAAG 1 cut(s) 632
BstAPI GCANNNNNTGC 2 cut(s) 89, 313
BstAUI TGTACA 1 cut(s) 868
BstC8I GCNNGC 2 cut(s) 396, 405
BstDEI CTNAG 5 cut(s) 156, 513, 681, 1254, 1336
BstDSI CCRYGG 1 cut(s) 499
BstF5I GGATG 6 cut(s) 16, 572, 747, 1024, 1045, 1286
BstFNI CGCG 1 cut(s) 1389
BstH2I RGCGCY 1 cut(s) 1636
BstHHI GCGC 2 cut(s) 174, 1635
BstKTI GATC 8 cut(s) 127, 440, 538, 1310, 1315, 1332, 1345, 1349
BstMAI GTCTC 3 cut(s) 14, 812, 1496
BstMBI GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
BstNI CCWGG 2 cut(s) 1629, 1674
BstSCI CCNGG 2 cut(s) 1627, 1672
BstSFI CTRYAG 1 cut(s) 1485
BstSLI GKGCMC 1 cut(s) 267
BstUI CGCG 1 cut(s) 1389
BstV1I GCAGC 9 cut(s) 95, 139, 412, 940, 1009, 1408, 1417, 1499, 1552
BstV2I GAAGAC 1 cut(s) 497
BstX2I RGATCY 2 cut(s) 437, 1329
BstYI RGATCY 2 cut(s) 437, 1329
Bsu15I ATCGAT 1 cut(s) 1345
BsuTUI ATCGAT 1 cut(s) 1345
BtgI CCRYGG 1 cut(s) 499
BtsCI GGATG 6 cut(s) 16, 572, 747, 1024, 1045, 1286
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 1 cut(s) 849
BveI ACCTGC 1 cut(s) 1739
Cac8I GCNNGC 2 cut(s) 396, 405
CfoI GCGC 2 cut(s) 174, 1635
Cfr10I RCCGGY 1 cut(s) 540
Cfr13I GGNCC 2 cut(s) 530, 1300
ClaI ATCGAT 1 cut(s) 1345
CseI GACGC 1 cut(s) 264
Csp6I GTAC 6 cut(s) 472, 651, 869, 935, 1601, 1688
CspAI ACCGGT 1 cut(s) 540
CviAII CATG 7 cut(s) 353, 872, 1066, 1178, 1413, 1421, 1443
CviQI GTAC 6 cut(s) 472, 651, 869, 935, 1601, 1688
DdeI CTNAG 5 cut(s) 156, 513, 681, 1254, 1336
DinI GGCGCC 1 cut(s) 1634
DpnI GATC 8 cut(s) 126, 439, 537, 1309, 1314, 1331, 1344, 1348
DpnII GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
Eam1104I CTCTTC 1 cut(s) 1554
EarI CTCTTC 1 cut(s) 1554
EciI GGCGGA 1 cut(s) 1225
Eco130I CCWWGG 2 cut(s) 167, 926
Eco32I GATATC 1 cut(s) 358
Eco47I GGWCC 2 cut(s) 530, 1300
Eco88I CYCGRG 1 cut(s) 1590
EcoO109I RGGNCCY 1 cut(s) 1300
EcoRI GAATTC 1 cut(s) 914
EcoRII CCWGG 2 cut(s) 1627, 1672
EcoRV GATATC 1 cut(s) 358
EcoT14I CCWWGG 2 cut(s) 167, 926
EgeI GGCGCC 1 cut(s) 1634
EheI GGCGCC 1 cut(s) 1634
ErhI CCWWGG 2 cut(s) 167, 926
Esp3I CGTCTC 1 cut(s) 1496
FaeI CATG 7 cut(s) 356, 875, 1069, 1181, 1416, 1424, 1446
FalI AAGNNNNNCTT 2 cut(s) 1210, 1242
FaqI GGGAC 1 cut(s) 432
FatI CATG 7 cut(s) 352, 871, 1065, 1177, 1412, 1420, 1442
FauI CCCGC 2 cut(s) 309, 1061
FblI GTMKAC 1 cut(s) 1621
FokI GGATG 6 cut(s) 23, 559, 754, 1031, 1032, 1273
FspBI CTAG 1 cut(s) 773
GlaI GCGC 2 cut(s) 173, 1634
GsaI CCCAGC 1 cut(s) 1060
GsuI CTGGAG 1 cut(s) 1533
HaeII RGCGCY 1 cut(s) 1636
HapII CCGG 1 cut(s) 541
HgaI GACGC 1 cut(s) 264
HhaI GCGC 2 cut(s) 174, 1635
Hin1I GRCGYC 2 cut(s) 275, 1633
Hin1II CATG 7 cut(s) 356, 875, 1069, 1181, 1416, 1424, 1446
Hin6I GCGC 2 cut(s) 172, 1633
HinP1I GCGC 2 cut(s) 172, 1633
HindIII AAGCTT 1 cut(s) 188
HinfI GANTC 4 cut(s) 624, 1129, 1174, 1615
HpaII CCGG 1 cut(s) 541
HphI GGTGA 2 cut(s) 530, 1174
Hpy166II GTNNAC 5 cut(s) 522, 804, 1145, 1409, 1622
Hpy188I TCNGA 7 cut(s) 445, 591, 757, 817, 1312, 1351, 1449
Hpy188III TCNNGA 6 cut(s) 38, 224, 533, 919, 1133, 1142
Hpy8I GTNNAC 5 cut(s) 522, 804, 1145, 1409, 1622
HpyAV CCTTC 9 cut(s) 221, 443, 470, 820, 843, 1059, 1070, 1246, 1313
HpyCH4III ACNGT 5 cut(s) 476, 500, 801, 1499, 1687
HpyCH4IV ACGT 3 cut(s) 310, 1505, 1690
HpyF3I CTNAG 5 cut(s) 156, 513, 681, 1254, 1336
HpySE526I ACGT 3 cut(s) 310, 1505, 1690
Hsp92I GRCGYC 2 cut(s) 275, 1633
Hsp92II CATG 7 cut(s) 356, 875, 1069, 1181, 1416, 1424, 1446
HspAI GCGC 2 cut(s) 172, 1633
KasI GGCGCC 1 cut(s) 1632
Kzo9I GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
LmnI GCTCC 2 cut(s) 1249, 1514
Lsp1109I GCAGC 9 cut(s) 95, 139, 412, 940, 1009, 1408, 1417, 1499, 1552
LweI GCATC 4 cut(s) 667, 829, 1009, 1295
MaeI CTAG 1 cut(s) 773
MaeII ACGT 3 cut(s) 310, 1505, 1690
MaeIII GTNAC 2 cut(s) 1493, 1703
MalI GATC 8 cut(s) 126, 439, 537, 1309, 1314, 1331, 1344, 1348
MboI GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
MboII GAAGA 6 cut(s) 432, 455, 502, 734, 1214, 1571
MfeI CAATTG 1 cut(s) 87
MflI RGATCY 2 cut(s) 437, 1329
MhlI GDGCHC 1 cut(s) 267
MluCI AATT 9 cut(s) 87, 328, 854, 914, 1040, 1155, 1184, 1222, 1322
Mly113I GGCGCC 1 cut(s) 1633
MmeI TCCRAC 1 cut(s) 1427
MseI TTAA 4 cut(s) 75, 327, 633, 1668
MslI CAYNNNNRTG 2 cut(s) 240, 894
MspA1I CMGCKG 2 cut(s) 1056, 1340
MspCI CTTAAG 1 cut(s) 632
MspI CCGG 1 cut(s) 541
MspR9I CCNGG 2 cut(s) 1629, 1674
MunI CAATTG 1 cut(s) 87
Mva1269I GAATGC 5 cut(s) 73, 174, 704, 882, 1061
MvaI CCWGG 2 cut(s) 1629, 1674
MvnI CGCG 1 cut(s) 1389
NarI GGCGCC 1 cut(s) 1633
NdeII GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
NlaIII CATG 7 cut(s) 356, 875, 1069, 1181, 1416, 1424, 1446
NlaIV GGNNCC 4 cut(s) 266, 545, 1369, 1634
OliI CACNNNNGTG 2 cut(s) 240, 894
PaeR7I CTCGAG 1 cut(s) 1590
PctI GAATGC 5 cut(s) 73, 174, 704, 882, 1061
PfeI GAWTC 4 cut(s) 624, 1129, 1174, 1615
PinAI ACCGGT 1 cut(s) 540
PluTI GGCGCC 1 cut(s) 1636
PpuMI RGGWCCY 1 cut(s) 1300
PshBI ATTAAT 2 cut(s) 327, 1668
PsiI TTATAA 1 cut(s) 1722
Psp5II RGGWCCY 1 cut(s) 1300
Psp6I CCWGG 2 cut(s) 1627, 1672
PspFI CCCAGC 1 cut(s) 1056
PspGI CCWGG 2 cut(s) 1627, 1672
PspN4I GGNNCC 4 cut(s) 266, 545, 1369, 1634
PspPI GGNCC 2 cut(s) 530, 1300
PspPPI RGGWCCY 1 cut(s) 1300
PspXI VCTCGAGB 1 cut(s) 1590
PstI CTGCAG 1 cut(s) 1489
PsuI RGATCY 2 cut(s) 437, 1329
PvuII CAGCTG 1 cut(s) 1340
RsaI GTAC 6 cut(s) 473, 652, 870, 936, 1602, 1689
RsaNI GTAC 6 cut(s) 472, 651, 869, 935, 1601, 1688
RseI CAYNNNNRTG 2 cut(s) 240, 894
SaqAI TTAA 4 cut(s) 75, 327, 633, 1668
Sau3AI GATC 8 cut(s) 124, 437, 535, 1307, 1312, 1329, 1342, 1346
Sau96I GGNCC 2 cut(s) 530, 1300
ScrFI CCNGG 2 cut(s) 1629, 1674
SduI GDGCHC 1 cut(s) 267
SfaNI GCATC 4 cut(s) 667, 829, 1009, 1295
SfcI CTRYAG 1 cut(s) 1485
SfoI GGCGCC 1 cut(s) 1634
Sfr274I CTCGAG 1 cut(s) 1590
SinI GGWCC 2 cut(s) 530, 1300
SlaI CTCGAG 1 cut(s) 1590
SmiMI CAYNNNNRTG 2 cut(s) 240, 894
SmlI CTYRAG 3 cut(s) 632, 892, 1590
SmoI CTYRAG 3 cut(s) 632, 892, 1590
Sse9I AATT 9 cut(s) 87, 328, 854, 914, 1040, 1155, 1184, 1222, 1322
SsiI CCGC 5 cut(s) 133, 316, 1054, 1210, 1387
SspDI GGCGCC 1 cut(s) 1632
SspI AATATT 2 cut(s) 1108, 1363
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 2 cut(s) 1627, 1672
StyI CCWWGG 2 cut(s) 167, 926
TaaI ACNGT 5 cut(s) 476, 500, 801, 1499, 1687
TaiI ACGT 3 cut(s) 313, 1508, 1693
TaqI TCGA 5 cut(s) 675, 1306, 1345, 1543, 1591
TasI AATT 9 cut(s) 87, 328, 854, 914, 1040, 1155, 1184, 1222, 1322
TatI WGTACW 2 cut(s) 471, 868
TauI GCSGC 1 cut(s) 1389
TfiI GAWTC 4 cut(s) 624, 1129, 1174, 1615
Tru1I TTAA 4 cut(s) 75, 327, 633, 1668
Tru9I TTAA 4 cut(s) 75, 327, 633, 1668
TscAI CASTG 1 cut(s) 849
TseI GCWGC 9 cut(s) 83, 152, 425, 953, 1022, 1396, 1430, 1487, 1565
TspDTI ATGAA 7 cut(s) 495, 561, 735, 794, 1034, 1054, 1166
TspGWI ACGGA 1 cut(s) 1663
TspRI CASTG 1 cut(s) 849
Vha464I CTTAAG 1 cut(s) 632
VpaK11BI GGWCC 2 cut(s) 530, 1300
VspI ATTAAT 2 cut(s) 327, 1668
XapI RAATTY 3 cut(s) 854, 914, 1322
XcmI CCANNNNNNNNNTGG 1 cut(s) 368
XhoI CTCGAG 1 cut(s) 1590
XmiI GTMKAC 1 cut(s) 1621
XspI CTAG 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.