AT1G17170

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5869543 .. 5870883
1341 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17170.1

Sequence Viewer

Length: 657 bp
ATGGCAGATGAGGTGATTCTTCTGGATTTCTGGGCGAGTATGTTTGGGATGAGGACAAGAATTGCTCTGGCGGAGAAAAGAGTTAAGTACGATCACAGAGAAGAAGATCTATGGAATAAGAGCTCCTTGCTCCTCGAGATGAACCCGGTTCATAAGAAAATTCCGGTTCTCATCCACAATGGTAAACCGGTATGTGAATCTCTCATTCAGATCGAGTACATAGACGAGACTTGGCCCGACAATAACCCTCTCCTTCCCTCCGATCCTTACAAGAGAGCTCATGCCAAATTCTGGGCCGACTTCATCGACAAAAAGGTGAATGTTACGGCGAGAAGGATTTGGGCGGTCAAAGGTGAGGAGCAAGAAGCAGCCAAGGAGTTAATCGAAATACTCAAGACGCTAGAGTCTGAGCTTGGAGACAAAAAGTACTTTGGAGACGAAACTTTTGGGTATGTAGATATAGCTCTCATTGGATTCCATAGCTGGTTTGCAGTGTACGAGAAGTTTGGAAATGTCAGTATCGAATCTGAGTGTTCGAAATTGGTTGCGTGGGCCAAAAGGTGTTTGGAGAGAGAGAGCGTCGCTAAAGCCCTGCCTGAGTCAGAGAAGGTCATTACATTCATTTCCGAACGTAGGAAGAAACTTGGGTTGGAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

25.31

Weight (kDa)

5.85

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 6.1e-16 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 7 - 79 6.8e-11 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 77 1.1e-11 Glutathione S-transferase, N-terminal domain
GST_C PF00043 119 - 192 2.9e-08 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 121 - 187 1.8e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 403
AccB7I CCANNNNNTGG 1 cut(s) 291
AciI CCGC 2 cut(s) 71, 344
AclWI GGATC 1 cut(s) 257
AcsI RAATTY 2 cut(s) 159, 287
AfaI GTAC 4 cut(s) 89, 218, 428, 497
AfiI CCNNNNNNNGG 2 cut(s) 291, 633
AgeI ACCGGT 1 cut(s) 187
AjuI GAANNNNNNNTTGG 1 cut(s) 632
AluBI AGCT 5 cut(s) 123, 278, 412, 464, 483
AluI AGCT 5 cut(s) 123, 278, 412, 464, 483
Alw21I GWGCWC 2 cut(s) 125, 280
Alw26I GTCTC 3 cut(s) 221, 411, 429
AlwI GGATC 1 cut(s) 257
Ama87I CYCGRG 1 cut(s) 134
AoxI GGCC 3 cut(s) 233, 294, 552
ApeKI GCWGC 1 cut(s) 368
ApoI RAATTY 2 cut(s) 159, 287
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AsiGI ACCGGT 1 cut(s) 187
AspS9I GGNCC 3 cut(s) 234, 294, 552
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 3 cut(s) 25, 328, 365
AsuII TTCGAA 1 cut(s) 536
AvaI CYCGRG 1 cut(s) 134
BanII GRGCYC 2 cut(s) 125, 280
Bbv12I GWGCWC 2 cut(s) 125, 280
BbvI GCAGC 1 cut(s) 380
BceAI ACGGC 1 cut(s) 342
BcnI CCSGG 1 cut(s) 146
BcoDI GTCTC 3 cut(s) 221, 411, 429
BfaI CTAG 1 cut(s) 401
BglII AGATCT 1 cut(s) 106
BisI GCNGC 1 cut(s) 369
BlsI GCNGC 1 cut(s) 370
BmcAI AGTACT 1 cut(s) 428
Bme1390I CCNGG 1 cut(s) 146
BmeT110I CYCGRG 1 cut(s) 134
BmgT120I GGNCC 3 cut(s) 234, 294, 552
BmrFI CCNGG 1 cut(s) 146
Bpu14I TTCGAA 1 cut(s) 536
BpuEI CTTGAG 1 cut(s) 377
BpuMI CCSGG 1 cut(s) 146
BsaJI CCNNGG 1 cut(s) 372
BsaWI WCCGGW 2 cut(s) 163, 187
Bsc4I CCNNNNNNNGG 2 cut(s) 291, 633
Bse118I RCCGGY 1 cut(s) 187
BseDI CCNNGG 1 cut(s) 372
BseGI GGATG 2 cut(s) 54, 171
BseLI CCNNNNNNNGG 2 cut(s) 291, 633
BseMII CTCAG 3 cut(s) 399, 519, 588
BseRI GAGGAG 2 cut(s) 122, 371
BseXI GCAGC 1 cut(s) 380
BshFI GGCC 3 cut(s) 235, 296, 554
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 125, 280
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 3 cut(s) 146, 164, 188
BslI CCNNNNNNNGG 2 cut(s) 291, 633
BsmAI GTCTC 3 cut(s) 221, 411, 429
BsmBI CGTCTC 1 cut(s) 429
BsnI GGCC 3 cut(s) 235, 296, 554
BsoBI CYCGRG 1 cut(s) 134
Bsp119I TTCGAA 1 cut(s) 536
Bsp1286I GDGCHC 2 cut(s) 125, 280
Bsp143I GATC 4 cut(s) 91, 106, 210, 262
BspACI CCGC 2 cut(s) 71, 344
BspANI GGCC 3 cut(s) 235, 296, 554
BspCNI CTCAG 3 cut(s) 400, 520, 589
BspPI GGATC 1 cut(s) 257
BspT104I TTCGAA 1 cut(s) 536
BsrFI RCCGGY 1 cut(s) 187
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 1 cut(s) 372
BssMI GATC 4 cut(s) 91, 106, 210, 262
BssT1I CCWWGG 1 cut(s) 372
BstBI TTCGAA 1 cut(s) 536
BstDEI CTNAG 3 cut(s) 408, 528, 597
BstF5I GGATG 2 cut(s) 54, 171
BstKTI GATC 4 cut(s) 94, 109, 213, 265
BstMAI GTCTC 3 cut(s) 221, 411, 429
BstMBI GATC 4 cut(s) 91, 106, 210, 262
BstSCI CCNGG 1 cut(s) 144
BstV1I GCAGC 1 cut(s) 380
BstX2I RGATCY 1 cut(s) 106
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 3 cut(s) 235, 296, 554
BtsCI GGATG 2 cut(s) 54, 171
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 1 cut(s) 498
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 3 cut(s) 234, 294, 552
CseI GACGC 2 cut(s) 406, 568
Csp6I GTAC 4 cut(s) 88, 217, 427, 496
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 1 cut(s) 281
CviQI GTAC 4 cut(s) 88, 217, 427, 496
DdeI CTNAG 3 cut(s) 408, 528, 597
DpnI GATC 4 cut(s) 93, 108, 212, 264
DpnII GATC 4 cut(s) 91, 106, 210, 262
DrdI GACNNNNNNGTC 1 cut(s) 403
DseDI GACNNNNNNGTC 1 cut(s) 403
EciI GGCGGA 1 cut(s) 86
Ecl136II GAGCTC 2 cut(s) 123, 278
Eco130I CCWWGG 1 cut(s) 372
Eco24I GRGCYC 2 cut(s) 125, 280
Eco53kI GAGCTC 2 cut(s) 123, 278
Eco88I CYCGRG 1 cut(s) 134
EcoICRI GAGCTC 2 cut(s) 123, 278
EcoT14I CCWWGG 1 cut(s) 372
EcoT38I GRGCYC 2 cut(s) 125, 280
ErhI CCWWGG 1 cut(s) 372
Esp3I CGTCTC 1 cut(s) 429
FaeI CATG 1 cut(s) 284
FaiI YATR 9 cut(s) 41, 112, 153, 193, 221, 282, 453, 461, 480
FalI AAGNNNNNCTT 2 cut(s) 110, 142
FatI CATG 1 cut(s) 280
Fnu4HI GCNGC 1 cut(s) 369
FokI GGATG 2 cut(s) 61, 158
FriOI GRGCYC 2 cut(s) 125, 280
Fsp4HI GCNGC 1 cut(s) 369
FspBI CTAG 1 cut(s) 401
GluI GCNGC 1 cut(s) 369
HaeIII GGCC 3 cut(s) 235, 296, 554
HapII CCGG 3 cut(s) 146, 164, 188
HgaI GACGC 2 cut(s) 406, 568
Hin1II CATG 1 cut(s) 284
HinfI GANTC 6 cut(s) 16, 197, 404, 474, 524, 599
HpaII CCGG 3 cut(s) 146, 164, 188
HphI GGTGA 3 cut(s) 25, 328, 365
Hpy166II GTNNAC 2 cut(s) 185, 496
Hpy188I TCNGA 6 cut(s) 210, 262, 409, 529, 604, 628
Hpy188III TCNNGA 3 cut(s) 23, 136, 394
Hpy8I GTNNAC 2 cut(s) 185, 496
Hpy99I CGWCG 1 cut(s) 584
HpyAV CCTTC 3 cut(s) 263, 327, 601
HpyCH4IV ACGT 1 cut(s) 631
HpyCH4V TGCA 1 cut(s) 491
HpyF3I CTNAG 3 cut(s) 408, 528, 597
HpySE526I ACGT 1 cut(s) 631
Hsp92II CATG 1 cut(s) 284
Kzo9I GATC 4 cut(s) 91, 106, 210, 262
LmnI GCTCC 3 cut(s) 128, 135, 358
Lsp1109I GCAGC 1 cut(s) 380
MaeI CTAG 1 cut(s) 401
MaeII ACGT 1 cut(s) 631
MaeIII GTNAC 1 cut(s) 322
MalI GATC 4 cut(s) 93, 108, 212, 264
MboI GATC 4 cut(s) 91, 106, 210, 262
MboII GAAGA 4 cut(s) 11, 113, 116, 649
MflI RGATCY 1 cut(s) 106
MhlI GDGCHC 2 cut(s) 125, 280
MluCI AATT 4 cut(s) 60, 159, 287, 539
MlyI GAGTC 2 cut(s) 413, 608
MmeI TCCRAC 1 cut(s) 630
MnlI CCTC 6 cut(s) 4, 45, 143, 258, 268, 349
MseI TTAA 2 cut(s) 84, 380
MspI CCGG 3 cut(s) 146, 164, 188
MspR9I CCNGG 1 cut(s) 146
NciI CCSGG 1 cut(s) 146
NdeII GATC 4 cut(s) 91, 106, 210, 262
NlaIII CATG 1 cut(s) 284
NspV TTCGAA 1 cut(s) 536
PaeR7I CTCGAG 1 cut(s) 134
PfeI GAWTC 4 cut(s) 16, 197, 474, 524
PflMI CCANNNNNTGG 1 cut(s) 291
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 1 cut(s) 370
PleI GAGTC 2 cut(s) 412, 607
PpsI GAGTC 2 cut(s) 412, 607
Psp124BI GAGCTC 2 cut(s) 125, 280
PspPI GGNCC 3 cut(s) 234, 294, 552
PsuI RGATCY 1 cut(s) 106
RsaI GTAC 4 cut(s) 89, 218, 428, 497
RsaNI GTAC 4 cut(s) 88, 217, 427, 496
SacI GAGCTC 2 cut(s) 125, 280
SaqAI TTAA 2 cut(s) 84, 380
SatI GCNGC 1 cut(s) 369
Sau3AI GATC 4 cut(s) 91, 106, 210, 262
Sau96I GGNCC 3 cut(s) 234, 294, 552
ScaI AGTACT 1 cut(s) 428
SchI GAGTC 2 cut(s) 413, 608
ScrFI CCNGG 1 cut(s) 146
SduI GDGCHC 2 cut(s) 125, 280
Sfr274I CTCGAG 1 cut(s) 134
SfuI TTCGAA 1 cut(s) 536
SlaI CTCGAG 1 cut(s) 134
SmlI CTYRAG 2 cut(s) 134, 392
SmoI CTYRAG 2 cut(s) 134, 392
Sse9I AATT 4 cut(s) 60, 159, 287, 539
SsiI CCGC 2 cut(s) 71, 344
SspMI CTAG 1 cut(s) 401
SstI GAGCTC 2 cut(s) 125, 280
StyD4I CCNGG 1 cut(s) 144
StyI CCWWGG 1 cut(s) 372
TaiI ACGT 1 cut(s) 634
TaqI TCGA 6 cut(s) 135, 213, 306, 384, 522, 536
TasI AATT 4 cut(s) 60, 159, 287, 539
TatI WGTACW 2 cut(s) 216, 426
TfiI GAWTC 4 cut(s) 16, 197, 474, 524
Tru1I TTAA 2 cut(s) 84, 380
Tru9I TTAA 2 cut(s) 84, 380
TscAI CASTG 1 cut(s) 498
TseI GCWGC 1 cut(s) 368
TspDTI ATGAA 4 cut(s) 140, 155, 292, 610
TspRI CASTG 1 cut(s) 498
Van91I CCANNNNNTGG 1 cut(s) 291
XapI RAATTY 2 cut(s) 159, 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XhoI CTCGAG 1 cut(s) 134
XspI CTAG 1 cut(s) 401
ZrmI AGTACT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.