RLG00000033010

glutathione s-transferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
22206873 .. 22208564
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033010

Sequence Viewer

Length: 513 bp
ATGGATGAGCACCCGGATCTTCTTGTGGATCGGGTTCATCTTAAGAAGCAGTTGGCTCTTGTTCCTCAGTATATTGATGAGGTATGGAAGGATAAGGCTCCTCTGCTTCCCTCTGATCCTTACCAGAGAGCCCAGGCCAGATTCTGGGCCGATTTTATTGATAAGAAGTTATATGATGCAGGCAGGAAGATATGGATTACAAAAGGAGAAGAGCTGCAGGCAGCAAAGACGGAATTCATTGAAAGCCTGAAGGTGTTGGAAGGAGAGCTTGGAGACAAGCCTTATTTCATGGGTGAGAGATTTGGGTTCCTGGACATTGCTCTCATCACATTCTACAGCTGGTTTCATGCTTATGAGACACTTGGAAACTTCAGTATAGAGGCCGAGTGCCCCAAGCTGATTTCATGGGCCAAGAGGTGCTTGCAGAAGGAGAGTGTTTCAAAATCTCTTGCTGACCGGAAGAAGGCTTATGAGTATTATCTTGAGATGAAGAAGAGGCTTGGTGTGGAATAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

171

Amino Acids

19.98

Weight (kDa)

6.34

Isoelectric Point (pI)

29.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_C PF00043 67 - 143 9.6e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 71 - 139 3.8e-11 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 144
AclWI GGATC 3 cut(s) 24, 36, 110
AcsI RAATTY 1 cut(s) 233
AcuI CTGAAG 2 cut(s) 269, 355
AfiI CCNNNNNNNGG 2 cut(s) 144, 463
AflII CTTAAG 1 cut(s) 41
AgsI TTSAA 2 cut(s) 242, 441
AjnI CCWGG 2 cut(s) 132, 309
AjuI GAANNNNNNNTTGG 2 cut(s) 252, 284
AluBI AGCT 4 cut(s) 214, 268, 339, 397
AluI AGCT 4 cut(s) 214, 268, 339, 397
Alw21I GWGCWC 1 cut(s) 12
Alw26I GTCTC 2 cut(s) 267, 350
AlwI GGATC 3 cut(s) 24, 36, 110
AlwNI CAGNNNCTG 1 cut(s) 144
AoxI GGCC 4 cut(s) 135, 147, 381, 408
ApeKI GCWGC 2 cut(s) 214, 221
ApoI RAATTY 1 cut(s) 233
AspS9I GGNCC 2 cut(s) 147, 408
AsuC2I CCSGG 1 cut(s) 14
AsuHPI GGTGA 1 cut(s) 305
BaeGI GKGCMC 1 cut(s) 392
BanII GRGCYC 1 cut(s) 133
Bbv12I GWGCWC 1 cut(s) 12
BbvI GCAGC 2 cut(s) 201, 233
BciT130I CCWGG 2 cut(s) 134, 311
BcnI CCSGG 1 cut(s) 14
BcoDI GTCTC 2 cut(s) 267, 350
BfmI CTRYAG 2 cut(s) 215, 334
BfrI CTTAAG 1 cut(s) 41
BisI GCNGC 2 cut(s) 215, 222
BlsI GCNGC 2 cut(s) 216, 223
Bme1390I CCNGG 3 cut(s) 14, 134, 311
BmgT120I GGNCC 2 cut(s) 147, 408
BmiI GGNNCC 2 cut(s) 99, 308
BmrFI CCNGG 3 cut(s) 14, 134, 311
BmsI GCATC 1 cut(s) 166
BpuEI CTTGAG 1 cut(s) 503
BpuMI CCSGG 1 cut(s) 14
BsaJI CCNNGG 1 cut(s) 132
BsaWI WCCGGW 1 cut(s) 456
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 463
Bse3DI GCAATG 1 cut(s) 315
BseBI CCWGG 2 cut(s) 134, 311
BseDI CCNNGG 1 cut(s) 132
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 2 cut(s) 144, 463
BseMI GCAATG 1 cut(s) 315
BseMII CTCAG 1 cut(s) 80
BseRI GAGGAG 1 cut(s) 90
BseSI GKGCMC 1 cut(s) 392
BseXI GCAGC 2 cut(s) 201, 233
BshFI GGCC 4 cut(s) 137, 149, 383, 410
BsiHKAI GWGCWC 1 cut(s) 12
BsiSI CCGG 2 cut(s) 14, 457
BslI CCNNNNNNNGG 2 cut(s) 144, 463
BsmAI GTCTC 2 cut(s) 267, 350
BsnI GGCC 4 cut(s) 137, 149, 383, 410
Bsp1286I GDGCHC 3 cut(s) 12, 133, 392
Bsp143I GATC 3 cut(s) 16, 28, 115
BspANI GGCC 4 cut(s) 137, 149, 383, 410
BspCNI CTCAG 1 cut(s) 79
BspLI GGNNCC 2 cut(s) 99, 308
BspMAI CTGCAG 1 cut(s) 219
BspPI GGATC 3 cut(s) 24, 36, 110
BspQI GCTCTTC 1 cut(s) 204
BspTI CTTAAG 1 cut(s) 41
BsrDI GCAATG 1 cut(s) 315
BssECI CCNNGG 1 cut(s) 132
BssMI GATC 3 cut(s) 16, 28, 115
Bst2UI CCWGG 2 cut(s) 134, 311
Bst6I CTCTTC 2 cut(s) 204, 488
BstAFI CTTAAG 1 cut(s) 41
BstC8I GCNNGC 3 cut(s) 181, 219, 422
BstDEI CTNAG 1 cut(s) 66
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 3 cut(s) 19, 31, 118
BstMAI GTCTC 2 cut(s) 267, 350
BstMBI GATC 3 cut(s) 16, 28, 115
BstNI CCWGG 2 cut(s) 134, 311
BstSCI CCNGG 3 cut(s) 12, 132, 309
BstSFI CTRYAG 2 cut(s) 215, 334
BstSLI GKGCMC 1 cut(s) 392
BstV1I GCAGC 2 cut(s) 201, 233
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BsuRI GGCC 4 cut(s) 137, 149, 383, 410
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 3 cut(s) 181, 219, 422
CaiI CAGNNNCTG 1 cut(s) 144
Cfr13I GGNCC 2 cut(s) 147, 408
CviAII CATG 3 cut(s) 289, 347, 405
DdeI CTNAG 1 cut(s) 66
DpnI GATC 3 cut(s) 18, 30, 117
DpnII GATC 3 cut(s) 16, 28, 115
Eam1104I CTCTTC 2 cut(s) 204, 488
EarI CTCTTC 2 cut(s) 204, 488
Eco24I GRGCYC 1 cut(s) 133
Eco57I CTGAAG 2 cut(s) 269, 355
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 2 cut(s) 132, 309
EcoT38I GRGCYC 1 cut(s) 133
FaeI CATG 3 cut(s) 292, 350, 408
FalI AAGNNNNNCTT 4 cut(s) 252, 284, 404, 436
FatI CATG 3 cut(s) 288, 346, 404
Fnu4HI GCNGC 2 cut(s) 215, 222
FokI GGATG 1 cut(s) 17
FriOI GRGCYC 1 cut(s) 133
Fsp4HI GCNGC 2 cut(s) 215, 222
GluI GCNGC 2 cut(s) 215, 222
HaeIII GGCC 4 cut(s) 137, 149, 383, 410
HapII CCGG 2 cut(s) 14, 457
Hin1II CATG 3 cut(s) 292, 350, 408
HinfI GANTC 1 cut(s) 141
HpaII CCGG 2 cut(s) 14, 457
HphI GGTGA 1 cut(s) 305
Hpy188I TCNGA 1 cut(s) 115
Hpy188III TCNNGA 1 cut(s) 482
HpyAV CCTTC 5 cut(s) 82, 244, 254, 421, 457
HpyCH4V TGCA 3 cut(s) 179, 217, 424
HpyF3I CTNAG 1 cut(s) 66
Hsp92II CATG 3 cut(s) 292, 350, 408
Kzo9I GATC 3 cut(s) 16, 28, 115
LguI GCTCTTC 1 cut(s) 204
LmnI GCTCC 1 cut(s) 103
Lsp1109I GCAGC 2 cut(s) 201, 233
LweI GCATC 1 cut(s) 166
MalI GATC 3 cut(s) 18, 30, 117
MboI GATC 3 cut(s) 16, 28, 115
MboII GAAGA 6 cut(s) 11, 199, 221, 472, 502, 505
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 3 cut(s) 12, 133, 392
MluCI AATT 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 237
MnlI CCTC 7 cut(s) 73, 75, 111, 121, 373, 408, 489
MseI TTAA 1 cut(s) 42
MslI CAYNNNNRTG 1 cut(s) 351
MspA1I CMGCKG 1 cut(s) 339
MspCI CTTAAG 1 cut(s) 41
MspI CCGG 2 cut(s) 14, 457
MspR9I CCNGG 3 cut(s) 14, 134, 311
MvaI CCWGG 2 cut(s) 134, 311
NciI CCSGG 1 cut(s) 14
NdeII GATC 3 cut(s) 16, 28, 115
NlaIII CATG 3 cut(s) 292, 350, 408
NlaIV GGNNCC 2 cut(s) 99, 308
NmeAIII GCCGAG 1 cut(s) 409
PciSI GCTCTTC 1 cut(s) 204
PfeI GAWTC 1 cut(s) 141
PflMI CCANNNNNTGG 1 cut(s) 144
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 2 cut(s) 216, 223
Psp6I CCWGG 2 cut(s) 132, 309
PspGI CCWGG 2 cut(s) 132, 309
PspN4I GGNNCC 2 cut(s) 99, 308
PspPI GGNCC 2 cut(s) 147, 408
PstI CTGCAG 1 cut(s) 219
PstNI CAGNNNCTG 1 cut(s) 144
PsuI RGATCY 1 cut(s) 16
PvuII CAGCTG 1 cut(s) 339
RseI CAYNNNNRTG 1 cut(s) 351
SapI GCTCTTC 1 cut(s) 204
SaqAI TTAA 1 cut(s) 42
SatI GCNGC 2 cut(s) 215, 222
Sau3AI GATC 3 cut(s) 16, 28, 115
Sau96I GGNCC 2 cut(s) 147, 408
ScrFI CCNGG 3 cut(s) 14, 134, 311
SduI GDGCHC 3 cut(s) 12, 133, 392
SetI ASST 7 cut(s) 84, 216, 255, 270, 341, 399, 419
SfaNI GCATC 1 cut(s) 166
SfcI CTRYAG 2 cut(s) 215, 334
SmiMI CAYNNNNRTG 1 cut(s) 351
SmlI CTYRAG 2 cut(s) 41, 482
SmoI CTYRAG 2 cut(s) 41, 482
Sse9I AATT 1 cut(s) 233
StyD4I CCNGG 3 cut(s) 12, 132, 309
TasI AATT 1 cut(s) 233
TfiI GAWTC 1 cut(s) 141
Tru1I TTAA 1 cut(s) 42
Tru9I TTAA 1 cut(s) 42
TseI GCWGC 2 cut(s) 214, 221
TspDTI ATGAA 6 cut(s) 26, 226, 277, 335, 393, 503
TspGWI ACGGA 1 cut(s) 245
Van91I CCANNNNNTGG 1 cut(s) 144
Vha464I CTTAAG 1 cut(s) 41
XapI RAATTY 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.