Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000304

Physical Location & Seq

Genomic Coordinates Reverse (-)

8426660 .. 8427952

Gene Structure 1293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G147400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 660 bp

ATGGCGGATCAGGTGGTTTTGTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGCTGAGAATTGCTCTGGCTGAGAAGGGCGTTCAGTATGAGTACAAAGACGAGGACTTGAGGAACAAGAGCCCACTCTTGCTCCAGTCGAACCCGGTTCACAAGAAGATCCCGGTGCTCATTCACAATGGCAAAGCGGTCTCTGAGTCCCTCATTGCGGTTCAGTACATTGATGAGGTTTGGAAGGATAAGGCTCCTCTGCTGCCTTCTGATCCTCACCTCCGAGCCCAAGCCAGGTTCTGGGCTGACTACGTTGACAAGAAGATGTATGAGATTGGGAGGAAGGTGTGGACAACTAAAGGAGAAGAACAGGATGCAGCAAAGAAGGAGTTCCTTGAGTGCATTAGTGTGCTAGAAGGTGAGCTTGGAGACAAGCCTTACTTTGGGGGTAAGACTTTCGGATTCGTGGACGTGGCGCTCATTCCTTTTTATACCTGGTTGTCTGTCTATGAGAAGTTTGGCAACTTCAGTGTGGAGGCAGAGCACCCAAAGTTTATTGCATGGGCTAAGAGGTGCCTGGAGAAGGAGAGCGTGTCCAAGTCTATTCCTGACCAGCAAAAGGTCTATGACTTCGTTTTGGAAATGAGGAAAAAACTTGGAATAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

220

Amino Acids

25.29

Weight (kDa)

6.46

Isoelectric Point (pI)

35.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000304)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca	FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica	MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica	Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis	pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis	RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata	RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora	Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii	Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa	Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha	Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana	Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	564
AccB7I	CCANNNNNTGG	1 cut(s)	291
AciI	CCGC	3 cut(s)	5, 188, 209
AclWI	GGATC	3 cut(s)	15, 154, 257
AcuI	CTGAAG	1 cut(s)	502
AfaI	GTAC	2 cut(s)	95, 218
AfiI	CCNNNNNNNGG	6 cut(s)	208, 285, 291, 434, 574, 610
AjiI	CACGTC	1 cut(s)	463
AjnI	CCWGG	3 cut(s)	284, 485, 567
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
AluBI	AGCT	1 cut(s)	415
AluI	AGCT	1 cut(s)	415
Alw21I	GWGCWC	2 cut(s)	171, 537
Alw26I	GTCTC	2 cut(s)	196, 414
AlwI	GGATC	3 cut(s)	15, 154, 257
AlwNI	CAGNNNCTG	1 cut(s)	291
AoxI	GGCC	1 cut(s)	32
ApeKI	GCWGC	2 cut(s)	253, 368
Asp700I	GAANNNNTTC	1 cut(s)	380
AspLEI	GCGC	1 cut(s)	469
AspS9I	GGNCC	1 cut(s)	33
AsuC2I	CCSGG	2 cut(s)	146, 164
AsuHPI	GGTGA	2 cut(s)	260, 422
BanI	GGYRCC	1 cut(s)	564
BanII	GRGCYC	2 cut(s)	125, 280
Bbv12I	GWGCWC	2 cut(s)	171, 537
BbvI	GCAGC	2 cut(s)	240, 380
BciT130I	CCWGG	3 cut(s)	286, 487, 569
BcnI	CCSGG	2 cut(s)	146, 164
BcoDI	GTCTC	2 cut(s)	196, 414
BfaI	CTAG	1 cut(s)	404
BfoI	RGCGCY	1 cut(s)	470
BisI	GCNGC	2 cut(s)	254, 369
BlsI	GCNGC	2 cut(s)	255, 370
Bme1390I	CCNGG	5 cut(s)	146, 164, 286, 487, 569
BmgBI	CACGTC	1 cut(s)	463
BmgT120I	GGNCC	1 cut(s)	33
BmiI	GGNNCC	2 cut(s)	246, 566
BmrFI	CCNGG	5 cut(s)	146, 164, 286, 487, 569
BmsI	GCATC	1 cut(s)	355
BplI	GAGNNNNNCTC	2 cut(s)	49, 81
BpmI	CTGGAG	2 cut(s)	119, 590
BpuEI	CTTGAG	2 cut(s)	130, 407
BpuMI	CCSGG	2 cut(s)	146, 164
BsaI	GGTCTC	1 cut(s)	196
BsaXI	ACNNNNNCTCC	4 cut(s)	117, 147, 569, 599
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 285, 291, 434, 574, 610
Bse1I	ACTGG	1 cut(s)	136
Bse3DI	GCAATG	1 cut(s)	204
BseBI	CCWGG	3 cut(s)	286, 487, 569
BseGI	GGATG	2 cut(s)	54, 370
BseLI	CCNNNNNNNGG	6 cut(s)	208, 285, 291, 434, 574, 610
BseMI	GCAATG	1 cut(s)	204
BseMII	CTCAG	3 cut(s)	47, 63, 186
BseNI	ACTGG	1 cut(s)	136
BseRI	GAGGAG	1 cut(s)	237
BseXI	GCAGC	2 cut(s)	240, 380
BseYI	CCCAGC	1 cut(s)	35
BshFI	GGCC	1 cut(s)	34
BshNI	GGYRCC	1 cut(s)	564
BsiHKAI	GWGCWC	2 cut(s)	171, 537
BsiSI	CCGG	2 cut(s)	146, 164
BslFI	GGGAC	1 cut(s)	184
BslI	CCNNNNNNNGG	6 cut(s)	208, 285, 291, 434, 574, 610
BsmAI	GTCTC	2 cut(s)	196, 414
BsmFI	GGGAC	1 cut(s)	184
BsnI	GGCC	1 cut(s)	34
Bso31I	GGTCTC	1 cut(s)	196
Bsp1286I	GDGCHC	4 cut(s)	125, 171, 280, 537
Bsp143I	GATC	3 cut(s)	7, 159, 262
BspACI	CCGC	3 cut(s)	5, 188, 209
BspANI	GGCC	1 cut(s)	34
BspCNI	CTCAG	3 cut(s)	48, 64, 187
BspLI	GGNNCC	2 cut(s)	246, 566
BspPI	GGATC	3 cut(s)	15, 154, 257
BspT107I	GGYRCC	1 cut(s)	564
BspTNI	GGTCTC	1 cut(s)	196
BsrDI	GCAATG	1 cut(s)	204
BsrI	ACTGG	1 cut(s)	136
BssMI	GATC	3 cut(s)	7, 159, 262
Bst2UI	CCWGG	3 cut(s)	286, 487, 569
BstDEI	CTNAG	4 cut(s)	56, 72, 195, 558
BstENI	CCTNNNNNAGG	1 cut(s)	572
BstF5I	GGATG	2 cut(s)	54, 370
BstH2I	RGCGCY	1 cut(s)	470
BstHHI	GCGC	1 cut(s)	469
BstKTI	GATC	3 cut(s)	10, 162, 265
BstMAI	GTCTC	2 cut(s)	196, 414
BstMBI	GATC	3 cut(s)	7, 159, 262
BstNI	CCWGG	3 cut(s)	286, 487, 569
BstSCI	CCNGG	5 cut(s)	144, 162, 284, 485, 567
BstV1I	GCAGC	2 cut(s)	240, 380
BstX2I	RGATCY	1 cut(s)	159
BstYI	RGATCY	1 cut(s)	159
BsuRI	GGCC	1 cut(s)	34
BtrI	CACGTC	1 cut(s)	463
BtsCI	GGATG	2 cut(s)	54, 370
BtsIMutI	CAGTG	1 cut(s)	526
CaiI	CAGNNNCTG	1 cut(s)	291
CfoI	GCGC	1 cut(s)	469
Cfr13I	GGNCC	1 cut(s)	33
CsiI	ACCWGGT	1 cut(s)	485
Csp6I	GTAC	2 cut(s)	94, 217
CviAII	CATG	1 cut(s)	552
CviQI	GTAC	2 cut(s)	94, 217
DdeI	CTNAG	4 cut(s)	56, 72, 195, 558
DpnI	GATC	3 cut(s)	9, 161, 264
DpnII	GATC	3 cut(s)	7, 159, 262
EciI	GGCGGA	1 cut(s)	20
Eco24I	GRGCYC	2 cut(s)	125, 280
Eco31I	GGTCTC	1 cut(s)	196
Eco57I	CTGAAG	1 cut(s)	502
EcoNI	CCTNNNNNAGG	1 cut(s)	572
EcoRII	CCWGG	3 cut(s)	284, 485, 567
EcoT38I	GRGCYC	2 cut(s)	125, 280
FaeI	CATG	1 cut(s)	555
FaiI	YATR	6 cut(s)	90, 321, 483, 501, 553, 618
FalI	AAGNNNNNCTT	4 cut(s)	399, 431, 416, 448
FaqI	GGGAC	1 cut(s)	184
FatI	CATG	1 cut(s)	551
Fnu4HI	GCNGC	2 cut(s)	254, 369
FokI	GGATG	2 cut(s)	61, 377
FriOI	GRGCYC	2 cut(s)	125, 280
Fsp4HI	GCNGC	2 cut(s)	254, 369
FspBI	CTAG	1 cut(s)	404
GlaI	GCGC	1 cut(s)	468
GluI	GCNGC	2 cut(s)	254, 369
GsaI	CCCAGC	1 cut(s)	39
GsuI	CTGGAG	2 cut(s)	119, 590
HaeII	RGCGCY	1 cut(s)	470
HaeIII	GGCC	1 cut(s)	34
HapII	CCGG	2 cut(s)	146, 164
HhaI	GCGC	1 cut(s)	469
Hin1II	CATG	1 cut(s)	555
Hin6I	GCGC	1 cut(s)	467
HinP1I	GCGC	1 cut(s)	467
HincII	GTYRAC	1 cut(s)	307
HindII	GTYRAC	1 cut(s)	307
HinfI	GANTC	2 cut(s)	197, 453
HpaII	CCGG	2 cut(s)	146, 164
HphI	GGTGA	2 cut(s)	260, 422
Hpy166II	GTNNAC	4 cut(s)	151, 307, 342, 460
Hpy188I	TCNGA	4 cut(s)	196, 262, 275, 452
Hpy188III	TCNNGA	1 cut(s)	599
Hpy8I	GTNNAC	4 cut(s)	151, 307, 342, 460
HpyAV	CCTTC	7 cut(s)	70, 229, 267, 328, 370, 401, 568
HpyCH4IV	ACGT	2 cut(s)	303, 462
HpyCH4V	TGCA	3 cut(s)	368, 393, 551
HpyF3I	CTNAG	4 cut(s)	56, 72, 195, 558
HpySE526I	ACGT	2 cut(s)	303, 462
Hsp92II	CATG	1 cut(s)	555
HspAI	GCGC	1 cut(s)	467
Kzo9I	GATC	3 cut(s)	7, 159, 262
LmnI	GCTCC	2 cut(s)	138, 250
Lsp1109I	GCAGC	2 cut(s)	240, 380
LweI	GCATC	1 cut(s)	355
MabI	ACCWGGT	1 cut(s)	485
MaeI	CTAG	1 cut(s)	404
MaeII	ACGT	2 cut(s)	303, 462
MalI	GATC	3 cut(s)	9, 161, 264
MboI	GATC	3 cut(s)	7, 159, 262
MboII	GAAGA	3 cut(s)	169, 325, 368
MflI	RGATCY	1 cut(s)	159
MhlI	GDGCHC	4 cut(s)	125, 171, 280, 537
MluCI	AATT	1 cut(s)	60
MlyI	GAGTC	1 cut(s)	206
MroXI	GAANNNNTTC	1 cut(s)	380
MslI	CAYNNNNRTG	1 cut(s)	398
MspI	CCGG	2 cut(s)	146, 164
MspR9I	CCNGG	5 cut(s)	146, 164, 286, 487, 569
MvaI	CCWGG	3 cut(s)	286, 487, 569
NciI	CCSGG	2 cut(s)	146, 164
NdeII	GATC	3 cut(s)	7, 159, 262
NlaIII	CATG	1 cut(s)	555
NlaIV	GGNNCC	2 cut(s)	246, 566
PdmI	GAANNNNTTC	1 cut(s)	380
PfeI	GAWTC	1 cut(s)	453
PflMI	CCANNNNNTGG	1 cut(s)	291
PkrI	GCNGC	2 cut(s)	255, 370
PleI	GAGTC	1 cut(s)	205
PpsI	GAGTC	1 cut(s)	205
Psp6I	CCWGG	3 cut(s)	284, 485, 567
PspFI	CCCAGC	1 cut(s)	35
PspGI	CCWGG	3 cut(s)	284, 485, 567
PspN4I	GGNNCC	2 cut(s)	246, 566
PspPI	GGNCC	1 cut(s)	33
PstNI	CAGNNNCTG	1 cut(s)	291
PsuI	RGATCY	1 cut(s)	159
RsaI	GTAC	2 cut(s)	95, 218
RsaNI	GTAC	2 cut(s)	94, 217
RseI	CAYNNNNRTG	1 cut(s)	398
SatI	GCNGC	2 cut(s)	254, 369
Sau3AI	GATC	3 cut(s)	7, 159, 262
Sau96I	GGNCC	1 cut(s)	33
SchI	GAGTC	1 cut(s)	206
ScrFI	CCNGG	5 cut(s)	146, 164, 286, 487, 569
SduI	GDGCHC	4 cut(s)	125, 171, 280, 537
SexAI	ACCWGGT	1 cut(s)	485
SfaNI	GCATC	1 cut(s)	355
SmiMI	CAYNNNNRTG	1 cut(s)	398
SmlI	CTYRAG	2 cut(s)	109, 386
SmoI	CTYRAG	2 cut(s)	109, 386
Sse9I	AATT	1 cut(s)	60
SsiI	CCGC	3 cut(s)	5, 188, 209
SspMI	CTAG	1 cut(s)	404
StyD4I	CCNGG	5 cut(s)	144, 162, 284, 485, 567
TaiI	ACGT	2 cut(s)	306, 465
TaqI	TCGA	1 cut(s)	140
TasI	AATT	1 cut(s)	60
TatI	WGTACW	2 cut(s)	93, 216
TfiI	GAWTC	1 cut(s)	453
TscAI	CASTG	1 cut(s)	526
TseI	GCWGC	2 cut(s)	253, 368
TspRI	CASTG	1 cut(s)	526
Van91I	CCANNNNNTGG	1 cut(s)	291
XagI	CCTNNNNNAGG	1 cut(s)	572
XmnI	GAANNNNTTC	1 cut(s)	380
XspI	CTAG	1 cut(s)	404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.