MD10G1196600.v1.1

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
29460983 .. 29461586
604 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1196600.v1.1.491

Sequence Viewer

Length: 225 bp
ATGGTTGTGAAATTTGGGTTCTTGGACATTGCTCTCATCACGTTCTACTGCTGGTTCCATGCATATGAGACCTGTGGAAACTTCAGCATCGAAGCCGAGTGTCCCAAGCTCATTGCATGGGCCAAGAGGTGCATGCAGAGAGAGAGTGTTTCGAAATCTCTTGCTGACAAAAAGAAGGTGTATGAGCTTGTTCTTGGCGTGCAGAAGATGCTTGGTGTGGATTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.5

Weight (kDa)

8.39

Isoelectric Point (pI)

33.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 11
AcuI CTGAAG 1 cut(s) 67
AluBI AGCT 2 cut(s) 109, 187
AluI AGCT 2 cut(s) 109, 187
Alw26I GTCTC 1 cut(s) 62
AoxI GGCC 1 cut(s) 120
ApoI RAATTY 1 cut(s) 11
AspS9I GGNCC 1 cut(s) 120
AsuII TTCGAA 1 cut(s) 152
BcoDI GTCTC 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 120
BmiI GGNNCC 1 cut(s) 56
BmsI GCATC 2 cut(s) 96, 198
Bpu14I TTCGAA 1 cut(s) 152
BsaI GGTCTC 1 cut(s) 62
Bse3DI GCAATG 2 cut(s) 27, 111
BseMI GCAATG 2 cut(s) 27, 111
BsgI GTGCAG 1 cut(s) 221
BshFI GGCC 1 cut(s) 122
BslFI GGGAC 1 cut(s) 87
BsmAI GTCTC 1 cut(s) 62
BsmFI GGGAC 1 cut(s) 87
BsnI GGCC 1 cut(s) 122
Bso31I GGTCTC 1 cut(s) 62
Bsp119I TTCGAA 1 cut(s) 152
BspANI GGCC 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 56
BspT104I TTCGAA 1 cut(s) 152
BspTNI GGTCTC 1 cut(s) 62
BsrDI GCAATG 2 cut(s) 27, 111
BstAPI GCANNNNNTGC 1 cut(s) 208
BstBI TTCGAA 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 134, 200
BstMAI GTCTC 1 cut(s) 62
BstMWI GCNNNNNNNGC 1 cut(s) 208
BstNSI RCATGY 1 cut(s) 136
BsuRI GGCC 1 cut(s) 122
Cac8I GCNNGC 2 cut(s) 134, 200
Cfr13I GGNCC 1 cut(s) 120
CviAII CATG 3 cut(s) 59, 117, 133
CviJI RGCY 4 cut(s) 95, 109, 122, 187
CviKI_1 RGCY 4 cut(s) 95, 109, 122, 187
Eco31I GGTCTC 1 cut(s) 62
Eco57I CTGAAG 1 cut(s) 67
EcoT22I ATGCAT 1 cut(s) 64
FaeI CATG 3 cut(s) 62, 120, 136
FaiI YATR 6 cut(s) 60, 64, 66, 118, 134, 183
FaqI GGGAC 1 cut(s) 87
FatI CATG 3 cut(s) 58, 116, 132
FauNDI CATATG 1 cut(s) 64
HaeIII GGCC 1 cut(s) 122
Hin1II CATG 3 cut(s) 62, 120, 136
HpyAV CCTTC 1 cut(s) 169
HpyCH4IV ACGT 1 cut(s) 41
HpyCH4V TGCA 5 cut(s) 62, 116, 132, 136, 202
HpyF10VI GCNNNNNNNGC 1 cut(s) 208
HpySE526I ACGT 1 cut(s) 41
Hsp92II CATG 3 cut(s) 62, 120, 136
LpnPI CCDG 2 cut(s) 37, 85
LweI GCATC 2 cut(s) 96, 198
MaeII ACGT 1 cut(s) 41
MboII GAAGA 1 cut(s) 217
MluCI AATT 1 cut(s) 11
MnlI CCTC 1 cut(s) 120
Mph1103I ATGCAT 1 cut(s) 64
MslI CAYNNNNRTG 1 cut(s) 63
MwoI GCNNNNNNNGC 1 cut(s) 208
NdeI CATATG 1 cut(s) 64
NlaIII CATG 3 cut(s) 62, 120, 136
NlaIV GGNNCC 1 cut(s) 56
NmeAIII GCCGAG 1 cut(s) 121
NsiI ATGCAT 1 cut(s) 64
NspI RCATGY 1 cut(s) 136
NspV TTCGAA 1 cut(s) 152
PaeI GCATGC 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 56
PspPI GGNCC 1 cut(s) 120
RseI CAYNNNNRTG 1 cut(s) 63
Sau96I GGNCC 1 cut(s) 120
SetI ASST 6 cut(s) 44, 74, 111, 131, 180, 189
SfaNI GCATC 2 cut(s) 96, 198
SfuI TTCGAA 1 cut(s) 152
SmiMI CAYNNNNRTG 1 cut(s) 63
SphI GCATGC 1 cut(s) 136
Sse9I AATT 1 cut(s) 11
TaiI ACGT 1 cut(s) 44
TaqI TCGA 2 cut(s) 90, 152
TasI AATT 1 cut(s) 11
XapI RAATTY 1 cut(s) 11
XceI RCATGY 1 cut(s) 136
Zsp2I ATGCAT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.