pycom05g19570

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
22475360 .. 22476224
865 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19570.1

Sequence Viewer

Length: 663 bp
ATGGAAGATGAAGTGGTTCTGTTGGATTTCTGGCCAAGCCCTTTCGGGATGAGGGTGAGGATTGCCCTGGCGGAGAAGGGCGTCGAGTACGAGTCCCGGGAAGAAGACTTGAGCAACAAGAGCCCTCTGCTGCTCAAGATGAACCCTGTTCACAAGCAAATCCCAGTTCTGATCCACAAGGGAAGACCGATATGCGAATCCCTCATCATTGTTCAGTACATTGATGAGGTTTGGAGTAATAAAGCTCCTCTGCTGCCTTCTGATCCTTACCCTAGAGCCCATGCAAGGTTCTGGGCTGACTATGTTGACAAGAAGATTTATTCGACAGGGAGGTTGGTGTGGGTAACCAAAGGTGAAGTCCAAGAGGCAGCAAAGAAGGAACTGATAGAGTGCTTCAAGCTGCTGGAAAACGAGCTAGGGGACAAGACCTACTTTGGGGGTGAGAGTTTTGGCCTGGTGGACGTGGCACTTATCCCTTTCTATAGCTGGTTCTATGCACTGGAGACCTGTGGAAACCTGTGCATGGTGAAGGAGTGTCCGAGGCTGGTGGGTTGGGCAAAGAGATGCATGCAGAGGGAGAGTGTGTCCAAGTCTCTGCCTGATCAGTACAAAATGTATGACTTCCTTTTGGAGCTTAGAAAGAAGTTTGATGTTCATACCTAA

Protein Analysis

221

Amino Acids

25.58

Weight (kDa)

6.14

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 4.6e-21 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 76 1.4e-14 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 5.1e-15 Glutathione S-transferase, N-terminal domain
GST_C PF00043 117 - 193 1.2e-10 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 120 - 188 5.9e-10 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 71
AclWI GGATC 2 cut(s) 166, 257
AcoI YGGCCR 1 cut(s) 32
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 3 cut(s) 89, 218, 608
AfiI CCNNNNNNNGG 3 cut(s) 285, 435, 523
AgsI TTSAA 1 cut(s) 397
AjiI CACGTC 1 cut(s) 463
AjnI CCWGG 2 cut(s) 66, 453
AluBI AGCT 5 cut(s) 245, 400, 415, 486, 634
AluI AGCT 5 cut(s) 245, 400, 415, 486, 634
Alw26I GTCTC 2 cut(s) 497, 597
AlwI GGATC 2 cut(s) 166, 257
Ama87I CYCGRG 1 cut(s) 96
AoxI GGCC 2 cut(s) 32, 451
ApeKI GCWGC 4 cut(s) 130, 253, 368, 400
ArsI GACNNNNNNTTYG 2 cut(s) 342, 374
Asp700I GAANNNNTTC 1 cut(s) 15
AsuC2I CCSGG 2 cut(s) 97, 98
AsuHPI GGTGA 4 cut(s) 67, 365, 452, 538
AvaI CYCGRG 1 cut(s) 96
BalI TGGCCA 1 cut(s) 34
BanII GRGCYC 2 cut(s) 125, 280
BbsI GAAGAC 2 cut(s) 111, 190
BbvI GCAGC 4 cut(s) 117, 240, 380, 387
BciT130I CCWGG 2 cut(s) 68, 455
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 2 cut(s) 97, 98
BcoDI GTCTC 2 cut(s) 497, 597
BfaI CTAG 2 cut(s) 273, 416
BfmI CTRYAG 1 cut(s) 481
BisI GCNGC 4 cut(s) 131, 254, 369, 401
BlsI GCNGC 4 cut(s) 132, 255, 370, 402
Bme1390I CCNGG 4 cut(s) 68, 97, 98, 455
BmeT110I CYCGRG 1 cut(s) 96
BmgBI CACGTC 1 cut(s) 463
BmrFI CCNGG 4 cut(s) 68, 97, 98, 455
BmrI ACTGGG 1 cut(s) 158
BmsI GCATC 1 cut(s) 554
BmuI ACTGGG 1 cut(s) 158
BpiI GAAGAC 2 cut(s) 111, 190
BpmI CTGGAG 1 cut(s) 521
BpuEI CTTGAG 2 cut(s) 119, 130
BpuMI CCSGG 2 cut(s) 97, 98
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 3 cut(s) 66, 96, 539
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 435, 523
Bse1I ACTGG 2 cut(s) 164, 504
BseBI CCWGG 2 cut(s) 68, 455
BseDI CCNNGG 3 cut(s) 66, 96, 539
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 3 cut(s) 285, 435, 523
BseNI ACTGG 2 cut(s) 164, 504
BseRI GAGGAG 1 cut(s) 237
BseXI GCAGC 4 cut(s) 117, 240, 380, 387
BshFI GGCC 2 cut(s) 34, 453
BsiHKCI CYCGRG 1 cut(s) 96
BsiSI CCGG 1 cut(s) 97
BslFI GGGAC 2 cut(s) 79, 434
BslI CCNNNNNNNGG 3 cut(s) 285, 435, 523
BsmAI GTCTC 2 cut(s) 497, 597
BsmFI GGGAC 2 cut(s) 79, 434
BsnI GGCC 2 cut(s) 34, 453
Bso31I GGTCTC 1 cut(s) 497
BsoBI CYCGRG 1 cut(s) 96
Bsp1286I GDGCHC 2 cut(s) 125, 280
Bsp143I GATC 3 cut(s) 171, 262, 601
BspACI CCGC 1 cut(s) 71
BspANI GGCC 2 cut(s) 34, 453
BspPI GGATC 2 cut(s) 166, 257
BspTNI GGTCTC 1 cut(s) 497
BsrI ACTGG 2 cut(s) 164, 504
BssECI CCNNGG 3 cut(s) 66, 96, 539
BssMI GATC 3 cut(s) 171, 262, 601
BssNI GRCGYC 1 cut(s) 81
Bst2UI CCWGG 2 cut(s) 68, 455
BstACI GRCGYC 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 569
BstDEI CTNAG 1 cut(s) 635
BstEII GGTNACC 1 cut(s) 343
BstF5I GGATG 1 cut(s) 54
BstKTI GATC 3 cut(s) 174, 265, 604
BstMAI GTCTC 2 cut(s) 497, 597
BstMBI GATC 3 cut(s) 171, 262, 601
BstMWI GCNNNNNNNGC 1 cut(s) 120
BstNI CCWGG 2 cut(s) 68, 455
BstNSI RCATGY 1 cut(s) 571
BstPI GGTNACC 1 cut(s) 343
BstSCI CCNGG 4 cut(s) 66, 95, 96, 453
BstSFI CTRYAG 1 cut(s) 481
BstV1I GCAGC 4 cut(s) 117, 240, 380, 387
BstV2I GAAGAC 2 cut(s) 111, 190
BsuRI GGCC 2 cut(s) 34, 453
BtrI CACGTC 1 cut(s) 463
BtsCI GGATG 1 cut(s) 54
BtsIMutI CAGTG 1 cut(s) 497
Cac8I GCNNGC 1 cut(s) 569
Cfr9I CCCGGG 1 cut(s) 96
CseI GACGC 1 cut(s) 70
Csp6I GTAC 3 cut(s) 88, 217, 607
CviAII CATG 3 cut(s) 281, 523, 568
CviQI GTAC 3 cut(s) 88, 217, 607
DdeI CTNAG 1 cut(s) 635
DpnI GATC 3 cut(s) 173, 264, 603
DpnII GATC 3 cut(s) 171, 262, 601
EaeI YGGCCR 1 cut(s) 32
EciI GGCGGA 1 cut(s) 86
Eco24I GRGCYC 2 cut(s) 125, 280
Eco31I GGTCTC 1 cut(s) 497
Eco88I CYCGRG 1 cut(s) 96
Eco91I GGTNACC 1 cut(s) 343
EcoO65I GGTNACC 1 cut(s) 343
EcoRII CCWGG 2 cut(s) 66, 453
EcoT22I ATGCAT 1 cut(s) 569
EcoT38I GRGCYC 2 cut(s) 125, 280
FaeI CATG 3 cut(s) 284, 526, 571
FaiI YATR 9 cut(s) 193, 282, 303, 483, 495, 524, 569, 618, 657
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 2 cut(s) 79, 434
FatI CATG 3 cut(s) 280, 522, 567
FbaI TGATCA 1 cut(s) 601
Fnu4HI GCNGC 4 cut(s) 131, 254, 369, 401
FokI GGATG 1 cut(s) 61
FriOI GRGCYC 2 cut(s) 125, 280
Fsp4HI GCNGC 4 cut(s) 131, 254, 369, 401
FspBI CTAG 2 cut(s) 273, 416
GluI GCNGC 4 cut(s) 131, 254, 369, 401
GsuI CTGGAG 1 cut(s) 521
HaeIII GGCC 2 cut(s) 34, 453
HapII CCGG 1 cut(s) 97
HgaI GACGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 3 cut(s) 284, 526, 571
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 2 cut(s) 92, 197
HpaII CCGG 1 cut(s) 97
HphI GGTGA 4 cut(s) 67, 365, 452, 538
Hpy166II GTNNAC 3 cut(s) 151, 307, 460
Hpy188I TCNGA 3 cut(s) 171, 262, 540
Hpy188III TCNNGA 2 cut(s) 46, 136
Hpy8I GTNNAC 3 cut(s) 151, 307, 460
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 4 cut(s) 70, 267, 370, 523
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 5 cut(s) 284, 497, 522, 567, 571
HpyF10VI GCNNNNNNNGC 1 cut(s) 120
HpyF3I CTNAG 1 cut(s) 635
HpySE526I ACGT 1 cut(s) 462
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 3 cut(s) 284, 526, 571
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 3 cut(s) 171, 262, 601
LmnI GCTCC 2 cut(s) 250, 631
Lsp1109I GCAGC 4 cut(s) 117, 240, 380, 387
LweI GCATC 1 cut(s) 554
MaeI CTAG 2 cut(s) 273, 416
MaeII ACGT 1 cut(s) 462
MaeIII GTNAC 1 cut(s) 343
MalI GATC 3 cut(s) 173, 264, 603
MboI GATC 3 cut(s) 171, 262, 601
MboII GAAGA 5 cut(s) 17, 113, 116, 195, 325
MhlI GDGCHC 2 cut(s) 125, 280
MlsI TGGCCA 1 cut(s) 34
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 1 cut(s) 101
Mox20I TGGCCA 1 cut(s) 34
Mph1103I ATGCAT 1 cut(s) 569
MroXI GAANNNNTTC 1 cut(s) 15
MscI TGGCCA 1 cut(s) 34
Msp20I TGGCCA 1 cut(s) 34
MspI CCGG 1 cut(s) 97
MspR9I CCNGG 4 cut(s) 68, 97, 98, 455
MvaI CCWGG 2 cut(s) 68, 455
MwoI GCNNNNNNNGC 1 cut(s) 120
NciI CCSGG 2 cut(s) 97, 98
NdeII GATC 3 cut(s) 171, 262, 601
NlaIII CATG 3 cut(s) 284, 526, 571
NsiI ATGCAT 1 cut(s) 569
NspI RCATGY 1 cut(s) 571
PaeI GCATGC 1 cut(s) 571
PdmI GAANNNNTTC 1 cut(s) 15
PfeI GAWTC 1 cut(s) 197
PkrI GCNGC 4 cut(s) 132, 255, 370, 402
PleI GAGTC 1 cut(s) 100
PpsI GAGTC 1 cut(s) 100
Psp6I CCWGG 2 cut(s) 66, 453
PspEI GGTNACC 1 cut(s) 343
PspGI CCWGG 2 cut(s) 66, 453
RsaI GTAC 3 cut(s) 89, 218, 608
RsaNI GTAC 3 cut(s) 88, 217, 607
SatI GCNGC 4 cut(s) 131, 254, 369, 401
Sau3AI GATC 3 cut(s) 171, 262, 601
SchI GAGTC 1 cut(s) 101
ScrFI CCNGG 4 cut(s) 68, 97, 98, 455
SduI GDGCHC 2 cut(s) 125, 280
SfaNI GCATC 1 cut(s) 554
SfcI CTRYAG 1 cut(s) 481
SmaI CCCGGG 1 cut(s) 98
SmlI CTYRAG 2 cut(s) 109, 134
SmoI CTYRAG 2 cut(s) 109, 134
SphI GCATGC 1 cut(s) 571
SsiI CCGC 1 cut(s) 71
SspMI CTAG 2 cut(s) 273, 416
StyD4I CCNGG 4 cut(s) 66, 95, 96, 453
TaiI ACGT 1 cut(s) 465
TaqI TCGA 2 cut(s) 84, 323
TaqII GACCGA 1 cut(s) 202
TatI WGTACW 2 cut(s) 216, 606
TfiI GAWTC 1 cut(s) 197
TscAI CASTG 1 cut(s) 504
TseI GCWGC 4 cut(s) 130, 253, 368, 400
TspDTI ATGAA 3 cut(s) 24, 155, 644
TspMI CCCGGG 1 cut(s) 96
TspRI CASTG 1 cut(s) 504
XceI RCATGY 1 cut(s) 571
XmaI CCCGGG 1 cut(s) 96
XmnI GAANNNNTTC 1 cut(s) 15
XspI CTAG 2 cut(s) 273, 416
Zsp2I ATGCAT 1 cut(s) 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.