Prupe.4G147000_v2.0.a1

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000304
Physical Location & Seq
Forward (+)
8417314 .. 8418782
1469 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G147000.1

Sequence Viewer

Length: 591 bp
ATGGCGGATGAGGTTGTTCTTTTGGACTTCTGTGCAAGCATGTTTGCGATGAGGGCGAGAGTGGCGCTGGCTGAGAAGGGTGTCAAGTATGAGAACAGAGAGGAGGACTTGAGGAATAAGAGTTCATTGCTTCTGCAGATGAACCCGGTTCACAAGATGATCCCGGTTCTCATCCACAACGGTAAACCGATCTGTGAGTCTCTGATCATTGTGCAGTATGTTGATGAGGTCTGGAGGGACAAAGCTCCTCTGCTTCCCTCGGATCCTTACCAGAGAGCTCGGTCAAGGTTCTGGGCGGACTTCATTGATAAGAAGCTATACGTTGCTTCGAGGAAAATATGGGGCACAAAAGGAGAGGAACAAGAGGCAGGCAAGAAGGAATTCATTGAAGCCCTTAAGCAGTTGGAAGGAGAGCTTGGAGACAGGCCTTATTTTGAGGGTGAGAGCTTTGGGTTCTTGGACATTGCTCTTATCCCATTCTACAGCTGGTACTATGCATATGAGACTTTTGGAAGAGCGTGTCGAAATCTCTTGCAGACCCTAAAAAGGTGTATGAGTCTCTTGTTAATTGGGTATAGAACAGGCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

197

Amino Acids

22.75

Weight (kDa)

7.58

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 296
AclWI GGATC 3 cut(s) 154, 257, 270
AcsI RAATTY 1 cut(s) 380
AfaI GTAC 1 cut(s) 491
AfiI CCNNNNNNNGG 1 cut(s) 546
AflII CTTAAG 1 cut(s) 395
AgsI TTSAA 1 cut(s) 389
AjuI GAANNNNNNNTTGG 2 cut(s) 399, 431
AloI GAACNNNNNNTCC 2 cut(s) 106, 138
AluBI AGCT 6 cut(s) 245, 278, 316, 415, 447, 486
AluI AGCT 6 cut(s) 245, 278, 316, 415, 447, 486
Alw21I GWGCWC 1 cut(s) 280
Alw26I GTCTC 4 cut(s) 204, 414, 497, 563
AlwI GGATC 3 cut(s) 154, 257, 270
AoxI GGCC 1 cut(s) 425
ApeKI GCWGC 1 cut(s) 585
ApoI RAATTY 1 cut(s) 380
Asp700I GAANNNNTTC 1 cut(s) 380
AspLEI GCGC 1 cut(s) 67
AsuC2I CCSGG 2 cut(s) 146, 164
AsuHPI GGTGA 1 cut(s) 452
BaeGI GKGCMC 1 cut(s) 347
BamHI GGATCC 1 cut(s) 262
BanII GRGCYC 1 cut(s) 280
Bbv12I GWGCWC 1 cut(s) 280
BbvI GCAGC 1 cut(s) 572
BclI TGATCA 1 cut(s) 204
BcnI CCSGG 2 cut(s) 146, 164
BcoDI GTCTC 4 cut(s) 204, 414, 497, 563
BfaI CTAG 1 cut(s) 589
BfmI CTRYAG 2 cut(s) 134, 481
BfoI RGCGCY 1 cut(s) 68
BfrI CTTAAG 1 cut(s) 395
BisI GCNGC 1 cut(s) 586
BlsI GCNGC 1 cut(s) 587
Bme1390I CCNGG 2 cut(s) 146, 164
BmiI GGNNCC 1 cut(s) 264
BmrFI CCNGG 2 cut(s) 146, 164
BpmI CTGGAG 1 cut(s) 253
BpuEI CTTGAG 1 cut(s) 130
BpuMI CCSGG 2 cut(s) 146, 164
BsaJI CCNNGG 1 cut(s) 258
Bsc4I CCNNNNNNNGG 1 cut(s) 546
Bse3DI GCAATG 2 cut(s) 125, 462
BseDI CCNNGG 1 cut(s) 258
BseGI GGATG 2 cut(s) 13, 171
BseLI CCNNNNNNNGG 1 cut(s) 546
BseMI GCAATG 2 cut(s) 125, 462
BseMII CTCAG 1 cut(s) 63
BseRI GAGGAG 2 cut(s) 116, 237
BseSI GKGCMC 1 cut(s) 347
BseXI GCAGC 1 cut(s) 572
BsgI GTGCAG 1 cut(s) 233
BshFI GGCC 1 cut(s) 427
BsiHKAI GWGCWC 1 cut(s) 280
BsiSI CCGG 2 cut(s) 146, 164
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 1 cut(s) 546
BsmAI GTCTC 4 cut(s) 204, 414, 497, 563
BsmFI GGGAC 1 cut(s) 251
BsnI GGCC 1 cut(s) 427
Bsp1286I GDGCHC 2 cut(s) 280, 347
Bsp143I GATC 4 cut(s) 159, 189, 204, 262
BspACI CCGC 2 cut(s) 5, 296
BspANI GGCC 1 cut(s) 427
BspCNI CTCAG 1 cut(s) 64
BspLI GGNNCC 1 cut(s) 264
BspMAI CTGCAG 1 cut(s) 138
BspPI GGATC 3 cut(s) 154, 257, 270
BspQI GCTCTTC 1 cut(s) 508
BspTI CTTAAG 1 cut(s) 395
BsrDI GCAATG 2 cut(s) 125, 462
BssECI CCNNGG 1 cut(s) 258
BssMI GATC 4 cut(s) 159, 189, 204, 262
Bst4CI ACNGT 1 cut(s) 182
Bst6I CTCTTC 1 cut(s) 508
BstAFI CTTAAG 1 cut(s) 395
BstC8I GCNNGC 3 cut(s) 37, 69, 370
BstDEI CTNAG 1 cut(s) 72
BstF5I GGATG 2 cut(s) 13, 171
BstH2I RGCGCY 1 cut(s) 68
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 4 cut(s) 162, 192, 207, 265
BstMAI GTCTC 4 cut(s) 204, 414, 497, 563
BstMBI GATC 4 cut(s) 159, 189, 204, 262
BstMWI GCNNNNNNNGC 2 cut(s) 53, 62
BstNSI RCATGY 1 cut(s) 43
BstSCI CCNGG 2 cut(s) 144, 162
BstSFI CTRYAG 2 cut(s) 134, 481
BstSLI GKGCMC 1 cut(s) 347
BstV1I GCAGC 1 cut(s) 572
BstX2I RGATCY 1 cut(s) 262
BstYI RGATCY 1 cut(s) 262
BsuRI GGCC 1 cut(s) 427
BtgZI GCGATG 1 cut(s) 62
BtsCI GGATG 2 cut(s) 13, 171
Cac8I GCNNGC 3 cut(s) 37, 69, 370
CfoI GCGC 1 cut(s) 67
Csp6I GTAC 1 cut(s) 490
CviAII CATG 1 cut(s) 40
CviQI GTAC 1 cut(s) 490
DdeI CTNAG 1 cut(s) 72
DpnI GATC 4 cut(s) 161, 191, 206, 264
DpnII GATC 4 cut(s) 159, 189, 204, 262
Eam1104I CTCTTC 1 cut(s) 508
EarI CTCTTC 1 cut(s) 508
EciI GGCGGA 2 cut(s) 20, 311
Ecl136II GAGCTC 1 cut(s) 278
Eco147I AGGCCT 1 cut(s) 427
Eco24I GRGCYC 1 cut(s) 280
Eco53kI GAGCTC 1 cut(s) 278
EcoICRI GAGCTC 1 cut(s) 278
EcoRI GAATTC 1 cut(s) 380
EcoT22I ATGCAT 1 cut(s) 499
EcoT38I GRGCYC 1 cut(s) 280
FaeI CATG 1 cut(s) 43
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 1 cut(s) 251
FatI CATG 1 cut(s) 39
FauNDI CATATG 1 cut(s) 499
FbaI TGATCA 1 cut(s) 204
Fnu4HI GCNGC 1 cut(s) 586
FokI GGATG 2 cut(s) 20, 158
FriOI GRGCYC 1 cut(s) 280
Fsp4HI GCNGC 1 cut(s) 586
FspBI CTAG 1 cut(s) 589
GlaI GCGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 586
GsuI CTGGAG 1 cut(s) 253
HaeII RGCGCY 1 cut(s) 68
HaeIII GGCC 1 cut(s) 427
HapII CCGG 2 cut(s) 146, 164
HhaI GCGC 1 cut(s) 67
Hin1II CATG 1 cut(s) 43
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HinfI GANTC 2 cut(s) 197, 556
HpaII CCGG 2 cut(s) 146, 164
HphI GGTGA 1 cut(s) 452
Hpy166II GTNNAC 2 cut(s) 151, 185
Hpy188I TCNGA 2 cut(s) 204, 262
Hpy188III TCNNGA 1 cut(s) 232
Hpy8I GTNNAC 2 cut(s) 151, 185
HpyAV CCTTC 3 cut(s) 70, 370, 401
HpyCH4III ACNGT 1 cut(s) 182
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 5 cut(s) 35, 136, 214, 497, 535
HpyF10VI GCNNNNNNNGC 2 cut(s) 53, 62
HpyF3I CTNAG 1 cut(s) 72
HpySE526I ACGT 1 cut(s) 321
Hsp92II CATG 1 cut(s) 43
HspAI GCGC 1 cut(s) 65
Ksp22I TGATCA 1 cut(s) 204
Kzo9I GATC 4 cut(s) 159, 189, 204, 262
LguI GCTCTTC 1 cut(s) 508
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 1 cut(s) 572
MaeI CTAG 1 cut(s) 589
MaeII ACGT 1 cut(s) 321
MalI GATC 4 cut(s) 161, 191, 206, 264
MboI GATC 4 cut(s) 159, 189, 204, 262
MboII GAAGA 1 cut(s) 525
MflI RGATCY 1 cut(s) 262
MhlI GDGCHC 2 cut(s) 280, 347
MluCI AATT 2 cut(s) 380, 567
MlyI GAGTC 2 cut(s) 206, 565
MmeI TCCRAC 1 cut(s) 384
Mph1103I ATGCAT 1 cut(s) 499
MroXI GAANNNNTTC 1 cut(s) 380
MseI TTAA 2 cut(s) 396, 566
MspA1I CMGCKG 1 cut(s) 486
MspCI CTTAAG 1 cut(s) 395
MspI CCGG 2 cut(s) 146, 164
MspR9I CCNGG 2 cut(s) 146, 164
MwoI GCNNNNNNNGC 2 cut(s) 53, 62
NciI CCSGG 2 cut(s) 146, 164
NdeI CATATG 1 cut(s) 499
NdeII GATC 4 cut(s) 159, 189, 204, 262
NlaIII CATG 1 cut(s) 43
NlaIV GGNNCC 1 cut(s) 264
NsiI ATGCAT 1 cut(s) 499
NspI RCATGY 1 cut(s) 43
PceI AGGCCT 1 cut(s) 427
PciSI GCTCTTC 1 cut(s) 508
PdmI GAANNNNTTC 1 cut(s) 380
PkrI GCNGC 1 cut(s) 587
PleI GAGTC 2 cut(s) 205, 564
PpsI GAGTC 2 cut(s) 205, 564
Psp124BI GAGCTC 1 cut(s) 280
PspN4I GGNNCC 1 cut(s) 264
PstI CTGCAG 1 cut(s) 138
PsuI RGATCY 1 cut(s) 262
PvuII CAGCTG 1 cut(s) 486
RsaI GTAC 1 cut(s) 491
RsaNI GTAC 1 cut(s) 490
SacI GAGCTC 1 cut(s) 280
SapI GCTCTTC 1 cut(s) 508
SaqAI TTAA 2 cut(s) 396, 566
SatI GCNGC 1 cut(s) 586
Sau3AI GATC 4 cut(s) 159, 189, 204, 262
SchI GAGTC 2 cut(s) 206, 565
ScrFI CCNGG 2 cut(s) 146, 164
SduI GDGCHC 2 cut(s) 280, 347
SfcI CTRYAG 2 cut(s) 134, 481
SmlI CTYRAG 2 cut(s) 109, 395
SmoI CTYRAG 2 cut(s) 109, 395
Sse9I AATT 2 cut(s) 380, 567
SseBI AGGCCT 1 cut(s) 427
SsiI CCGC 2 cut(s) 5, 296
SspMI CTAG 1 cut(s) 589
SstI GAGCTC 1 cut(s) 280
StuI AGGCCT 1 cut(s) 427
StyD4I CCNGG 2 cut(s) 144, 162
TaaI ACNGT 1 cut(s) 182
TaiI ACGT 1 cut(s) 324
TaqI TCGA 2 cut(s) 329, 523
TaqII GACCGA 1 cut(s) 270
TasI AATT 2 cut(s) 380, 567
Tru1I TTAA 2 cut(s) 396, 566
Tru9I TTAA 2 cut(s) 396, 566
TseI GCWGC 1 cut(s) 585
TspDTI ATGAA 4 cut(s) 114, 155, 292, 373
Vha464I CTTAAG 1 cut(s) 395
XapI RAATTY 1 cut(s) 380
XceI RCATGY 1 cut(s) 43
XcmI CCANNNNNNNNNTGG 1 cut(s) 483
XmnI GAANNNNTTC 1 cut(s) 380
XspI CTAG 1 cut(s) 589
Zsp2I ATGCAT 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.