pycom05g19630

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
22532945 .. 22534113
1169 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19630.1

Sequence Viewer

Length: 660 bp
ATGGCGGATGAGGTGGTGTTGTTGGATTTCTGGCCAAGCCCATTTGGGATAAGACTGAGGATTGCTCTGGCTGAGAAGGGCATTGTGTATGAGTACAAAGAAGAGGACGTGTGGAACAAGAGCCCACTGTTGCTGCAGATGAACCCGGTTCACAAGAAGATCCCGGTTCTCATTCACAATGGAAAACCGGTCTCCGAGTCCCTCATTGCTCTTCAGTACATTGACGAAGTTTGGAATCATAAGGCTCCACTCTTGCCCTCTGATTCTTACCTCAGAGCGCAGGCCAGGTTCTGGGCTGACTTCGTCGACAAGAAGATTTTTGAGATTGGGAGGCAGCTTTGGGCAACCAAAGGAGAAGAACAGAATGCAGCAATAAAAGAATTTCTCAACTGCATTGGCGTGTTAGAAAGAGAGCTTGGAGACAAGCCTTTCTTTGGGGGGGATACCCTCGGATTCGTGGACGTAACGCTTATTTCGCACTACAGATGGTTTCTTGTGTATGAGAAATTTGGCAACTTTAGTGTTGAGGCAGAGCACCCAGAATTTATTGCCTGGGTTAAGAGGTGCATGGAGAAGGAGAGCGTGTCCAAGTCGCTTCCCGAGCAGGAAAAGGTCTACGATTACGCCATGCTTTTAAGGAAAAAGTTTGGAATTGAATAG

Protein Analysis

220

Amino Acids

25.5

Weight (kDa)

5.66

Isoelectric Point (pI)

44.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 9.7e-18 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 76 1.6e-10 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 7.4e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 117 - 192 9.2e-08 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 122 - 188 7.8e-10 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 291
AccI GTMKAC 2 cut(s) 306, 615
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 154
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 3 cut(s) 380, 506, 542
AcuI CTGAAG 1 cut(s) 197
AfaI GTAC 2 cut(s) 95, 218
AfiI CCNNNNNNNGG 2 cut(s) 291, 434
AflIII ACRYGT 1 cut(s) 108
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 1 cut(s) 656
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 2 cut(s) 284, 551
AjuI GAANNNNNNNTTGG 2 cut(s) 399, 431
AluBI AGCT 2 cut(s) 337, 415
AluI AGCT 2 cut(s) 337, 415
Alw21I GWGCWC 1 cut(s) 537
Alw26I GTCTC 2 cut(s) 196, 414
AlwI GGATC 1 cut(s) 154
AlwNI CAGNNNCTG 1 cut(s) 291
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 2 cut(s) 32, 282
ApeKI GCWGC 3 cut(s) 133, 334, 368
ApoI RAATTY 3 cut(s) 380, 506, 542
AsiGI ACCGGT 1 cut(s) 187
AspLEI GCGC 1 cut(s) 280
AsuC2I CCSGG 2 cut(s) 146, 164
AvaI CYCGRG 1 cut(s) 599
BalI TGGCCA 1 cut(s) 34
BanII GRGCYC 1 cut(s) 125
Bbv12I GWGCWC 1 cut(s) 537
BbvI GCAGC 3 cut(s) 120, 346, 380
BccI CCATC 1 cut(s) 480
BciT130I CCWGG 2 cut(s) 286, 553
BciVI GTATCC 1 cut(s) 436
BcnI CCSGG 2 cut(s) 146, 164
BcoDI GTCTC 2 cut(s) 196, 414
BfmI CTRYAG 2 cut(s) 134, 481
BfuI GTATCC 1 cut(s) 436
BisI GCNGC 3 cut(s) 134, 335, 369
BlsI GCNGC 3 cut(s) 135, 336, 370
Bme1390I CCNGG 4 cut(s) 146, 164, 286, 553
BmeT110I CYCGRG 1 cut(s) 599
BmgBI CACGTC 1 cut(s) 109
BmiI GGNNCC 1 cut(s) 246
BmrFI CCNGG 4 cut(s) 146, 164, 286, 553
BplI GAGNNNNNCTC 2 cut(s) 49, 81
BpuMI CCSGG 2 cut(s) 146, 164
BsaI GGTCTC 1 cut(s) 196
BsaJI CCNNGG 2 cut(s) 448, 552
BsaWI WCCGGW 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 2 cut(s) 291, 434
Bse118I RCCGGY 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 204
BseBI CCWGG 2 cut(s) 286, 553
BseDI CCNNGG 2 cut(s) 448, 552
BseGI GGATG 1 cut(s) 13
BseLI CCNNNNNNNGG 2 cut(s) 291, 434
BseMI GCAATG 1 cut(s) 204
BseMII CTCAG 3 cut(s) 47, 63, 286
BseXI GCAGC 3 cut(s) 120, 346, 380
BshFI GGCC 2 cut(s) 34, 284
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 537
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 3 cut(s) 146, 164, 188
BslFI GGGAC 1 cut(s) 184
BslI CCNNNNNNNGG 2 cut(s) 291, 434
BsmAI GTCTC 2 cut(s) 196, 414
BsmFI GGGAC 1 cut(s) 184
BsmI GAATGC 1 cut(s) 370
BsnI GGCC 2 cut(s) 34, 284
Bso31I GGTCTC 1 cut(s) 196
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 2 cut(s) 125, 537
Bsp143I GATC 1 cut(s) 159
BspACI CCGC 1 cut(s) 5
BspANI GGCC 2 cut(s) 34, 284
BspCNI CTCAG 3 cut(s) 48, 64, 285
BspLI GGNNCC 1 cut(s) 246
BspMAI CTGCAG 1 cut(s) 138
BspPI GGATC 1 cut(s) 154
BspQI GCTCTTC 1 cut(s) 216
BspTNI GGTCTC 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 204
BsrFI RCCGGY 1 cut(s) 187
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 2 cut(s) 448, 552
BssMI GATC 1 cut(s) 159
Bst2UI CCWGG 2 cut(s) 286, 553
Bst4CI ACNGT 1 cut(s) 129
Bst6I CTCTTC 2 cut(s) 96, 216
BstC8I GCNNGC 1 cut(s) 282
BstDEI CTNAG 3 cut(s) 56, 72, 272
BstF5I GGATG 1 cut(s) 13
BstHHI GCGC 1 cut(s) 280
BstKTI GATC 1 cut(s) 162
BstMAI GTCTC 2 cut(s) 196, 414
BstMBI GATC 1 cut(s) 159
BstMWI GCNNNNNNNGC 2 cut(s) 475, 601
BstNI CCWGG 2 cut(s) 286, 553
BstSCI CCNGG 4 cut(s) 144, 162, 284, 551
BstSFI CTRYAG 2 cut(s) 134, 481
BstV1I GCAGC 3 cut(s) 120, 346, 380
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 2 cut(s) 34, 284
BtrI CACGTC 1 cut(s) 109
BtsCI GGATG 1 cut(s) 13
BtsIMutI CAGTG 1 cut(s) 125
Cac8I GCNNGC 1 cut(s) 282
CaiI CAGNNNCTG 1 cut(s) 291
CfoI GCGC 1 cut(s) 280
Cfr10I RCCGGY 1 cut(s) 187
Csp6I GTAC 2 cut(s) 94, 217
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 2 cut(s) 568, 628
CviQI GTAC 2 cut(s) 94, 217
DdeI CTNAG 3 cut(s) 56, 72, 272
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
EaeI YGGCCR 1 cut(s) 32
Eam1104I CTCTTC 2 cut(s) 96, 216
EarI CTCTTC 2 cut(s) 96, 216
EciI GGCGGA 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 125
Eco31I GGTCTC 1 cut(s) 196
Eco57I CTGAAG 1 cut(s) 197
Eco88I CYCGRG 1 cut(s) 599
EcoRII CCWGG 2 cut(s) 284, 551
EcoT38I GRGCYC 1 cut(s) 125
FaeI CATG 2 cut(s) 571, 631
FaiI YATR 5 cut(s) 90, 240, 501, 569, 629
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 1 cut(s) 184
FatI CATG 2 cut(s) 567, 627
FblI GTMKAC 2 cut(s) 306, 615
Fnu4HI GCNGC 3 cut(s) 134, 335, 369
FokI GGATG 1 cut(s) 20
FriOI GRGCYC 1 cut(s) 125
Fsp4HI GCNGC 3 cut(s) 134, 335, 369
GlaI GCGC 1 cut(s) 279
GluI GCNGC 3 cut(s) 134, 335, 369
HaeIII GGCC 2 cut(s) 34, 284
HapII CCGG 3 cut(s) 146, 164, 188
HhaI GCGC 1 cut(s) 280
Hin1II CATG 2 cut(s) 571, 631
Hin6I GCGC 1 cut(s) 278
HinP1I GCGC 1 cut(s) 278
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 4 cut(s) 197, 235, 263, 453
HpaII CCGG 3 cut(s) 146, 164, 188
Hpy166II GTNNAC 4 cut(s) 151, 307, 460, 616
Hpy188I TCNGA 4 cut(s) 196, 262, 275, 452
Hpy188III TCNNGA 1 cut(s) 599
Hpy8I GTNNAC 4 cut(s) 151, 307, 460, 616
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 2 cut(s) 70, 568
HpyCH4III ACNGT 1 cut(s) 129
HpyCH4IV ACGT 2 cut(s) 108, 462
HpyCH4V TGCA 4 cut(s) 136, 368, 393, 567
HpyF10VI GCNNNNNNNGC 2 cut(s) 475, 601
HpyF3I CTNAG 3 cut(s) 56, 72, 272
HpySE526I ACGT 2 cut(s) 108, 462
Hsp92II CATG 2 cut(s) 571, 631
HspAI GCGC 1 cut(s) 278
Kzo9I GATC 1 cut(s) 159
LguI GCTCTTC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 3 cut(s) 120, 346, 380
MaeII ACGT 2 cut(s) 108, 462
MaeIII GTNAC 1 cut(s) 463
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 5 cut(s) 113, 169, 203, 325, 368
MflI RGATCY 1 cut(s) 159
MhlI GDGCHC 2 cut(s) 125, 537
MlsI TGGCCA 1 cut(s) 34
MluCI AATT 4 cut(s) 380, 506, 542, 651
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 1 cut(s) 206
Mox20I TGGCCA 1 cut(s) 34
MscI TGGCCA 1 cut(s) 34
MseI TTAA 2 cut(s) 558, 635
MslI CAYNNNNRTG 1 cut(s) 398
Msp20I TGGCCA 1 cut(s) 34
MspI CCGG 3 cut(s) 146, 164, 188
MspR9I CCNGG 4 cut(s) 146, 164, 286, 553
Mva1269I GAATGC 1 cut(s) 370
MvaI CCWGG 2 cut(s) 286, 553
MwoI GCNNNNNNNGC 2 cut(s) 475, 601
NciI CCSGG 2 cut(s) 146, 164
NdeII GATC 1 cut(s) 159
NlaIII CATG 2 cut(s) 571, 631
NlaIV GGNNCC 1 cut(s) 246
PciSI GCTCTTC 1 cut(s) 216
PctI GAATGC 1 cut(s) 370
PfeI GAWTC 3 cut(s) 235, 263, 453
PflFI GACNNNGTC 1 cut(s) 302
PflMI CCANNNNNTGG 1 cut(s) 291
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 3 cut(s) 135, 336, 370
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
Psp6I CCWGG 2 cut(s) 284, 551
PspGI CCWGG 2 cut(s) 284, 551
PspN4I GGNNCC 1 cut(s) 246
PstI CTGCAG 1 cut(s) 138
PstNI CAGNNNCTG 1 cut(s) 291
PsuI RGATCY 1 cut(s) 159
PsyI GACNNNGTC 1 cut(s) 302
RsaI GTAC 2 cut(s) 95, 218
RsaNI GTAC 2 cut(s) 94, 217
RseI CAYNNNNRTG 1 cut(s) 398
SalI GTCGAC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 216
SaqAI TTAA 2 cut(s) 558, 635
SatI GCNGC 3 cut(s) 134, 335, 369
Sau3AI GATC 1 cut(s) 159
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 4 cut(s) 146, 164, 286, 553
SduI GDGCHC 2 cut(s) 125, 537
SetI ASST 9 cut(s) 15, 111, 273, 290, 339, 417, 465, 566, 615
SfcI CTRYAG 2 cut(s) 134, 481
SmiMI CAYNNNNRTG 1 cut(s) 398
Sse9I AATT 4 cut(s) 380, 506, 542, 651
SsiI CCGC 1 cut(s) 5
StyD4I CCNGG 4 cut(s) 144, 162, 284, 551
TaaI ACNGT 1 cut(s) 129
TaiI ACGT 2 cut(s) 111, 465
TaqI TCGA 1 cut(s) 306
TasI AATT 4 cut(s) 380, 506, 542, 651
TatI WGTACW 2 cut(s) 93, 216
TfiI GAWTC 3 cut(s) 235, 263, 453
Tru1I TTAA 2 cut(s) 558, 635
Tru9I TTAA 2 cut(s) 558, 635
TscAI CASTG 1 cut(s) 132
TseI GCWGC 3 cut(s) 133, 334, 368
TspDTI ATGAA 1 cut(s) 155
TspRI CASTG 1 cut(s) 132
Tth111I GACNNNGTC 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 291
XapI RAATTY 3 cut(s) 380, 506, 542
XmiI GTMKAC 2 cut(s) 306, 615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.