Rmu_sc0001348.1_g000012

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001348.1
Physical Location & Seq
Forward (+)
58246 .. 58596
351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001348.1_g000012.1.cds

Sequence Viewer

Length: 351 bp
atgcagatagtagattgtgggagaaggatgtgggctagcaagggagcagaccaagaagcagcagcgactgaatttatagaatgtttgaaactattagaagttgagcttggggagatgccctttttcgaaggcgagcatttcggcctcttggatattgcccttataccattctcgggcaggttttatacatatgagacgtgttgcaatttcagcgtagagaaagaatgctctaagataatggaatgggtgaagagatgttatcagagggagagtgtttccactagcattccagacccatataaagtctatgacttcgttttggaagtgaagaagatgtatggaattagttag

Protein Analysis

116

Amino Acids

13.45

Weight (kDa)

4.81

Isoelectric Point (pI)

31.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 168
AcsI RAATTY 1 cut(s) 71
AfiI CCNNNNNNNGG 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 197
AgsI TTSAA 1 cut(s) 88
AjiI CACGTC 1 cut(s) 198
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
AluBI AGCT 1 cut(s) 106
AluI AGCT 1 cut(s) 106
Alw26I GTCTC 1 cut(s) 188
AlwNI CAGNNNCTG 1 cut(s) 68
Ama87I CYCGRG 1 cut(s) 172
AoxI GGCC 1 cut(s) 142
ApeKI GCWGC 2 cut(s) 59, 62
ApoI RAATTY 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 259
AsuII TTCGAA 1 cut(s) 126
AsuNHI GCTAGC 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 172
BbvI GCAGC 2 cut(s) 71, 74
BcoDI GTCTC 1 cut(s) 188
BfaI CTAG 2 cut(s) 36, 282
BfuAI ACCTGC 1 cut(s) 168
BisI GCNGC 2 cut(s) 60, 63
BlsI GCNGC 2 cut(s) 61, 64
BmeT110I CYCGRG 1 cut(s) 172
BmgBI CACGTC 1 cut(s) 198
BmsI GCATC 1 cut(s) 105
BmtI GCTAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 126
Bsc4I CCNNNNNNNGG 1 cut(s) 173
BseGI GGATG 1 cut(s) 33
BseLI CCNNNNNNNGG 1 cut(s) 173
BseXI GCAGC 2 cut(s) 71, 74
BshFI GGCC 1 cut(s) 144
BsiHKCI CYCGRG 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 173
BsmAI GTCTC 1 cut(s) 188
BsmBI CGTCTC 1 cut(s) 188
BsmI GAATGC 2 cut(s) 230, 285
BsnI GGCC 1 cut(s) 144
BsoBI CYCGRG 1 cut(s) 172
Bsp119I TTCGAA 1 cut(s) 126
BspANI GGCC 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 168
BspOI GCTAGC 1 cut(s) 39
BspT104I TTCGAA 1 cut(s) 126
Bst6I CTCTTC 1 cut(s) 245
BstBI TTCGAA 1 cut(s) 126
BstC8I GCNNGC 2 cut(s) 37, 134
BstDEI CTNAG 1 cut(s) 231
BstF5I GGATG 1 cut(s) 33
BstMAI GTCTC 1 cut(s) 188
BstMWI GCNNNNNNNGC 1 cut(s) 210
BstV1I GCAGC 2 cut(s) 71, 74
BsuRI GGCC 1 cut(s) 144
BtrI CACGTC 1 cut(s) 198
BtsCI GGATG 1 cut(s) 33
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 2 cut(s) 37, 134
CaiI CAGNNNCTG 1 cut(s) 68
CviJI RGCY 3 cut(s) 35, 106, 144
CviKI_1 RGCY 3 cut(s) 35, 106, 144
DdeI CTNAG 1 cut(s) 231
Eam1104I CTCTTC 1 cut(s) 245
EarI CTCTTC 1 cut(s) 245
Eco88I CYCGRG 1 cut(s) 172
Esp3I CGTCTC 1 cut(s) 188
FaiI YATR 9 cut(s) 77, 164, 186, 190, 192, 298, 300, 309, 339
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FauNDI CATATG 1 cut(s) 190
Fnu4HI GCNGC 2 cut(s) 60, 63
FokI GGATG 1 cut(s) 40
Fsp4HI GCNGC 2 cut(s) 60, 63
FspBI CTAG 2 cut(s) 36, 282
GluI GCNGC 2 cut(s) 60, 63
HaeIII GGCC 1 cut(s) 144
HphI GGTGA 1 cut(s) 259
Hpy188I TCNGA 1 cut(s) 264
Hpy188III TCNNGA 1 cut(s) 290
HpyAV CCTTC 2 cut(s) 18, 122
HpyCH4IV ACGT 1 cut(s) 197
HpyCH4V TGCA 2 cut(s) 4, 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 210
HpyF3I CTNAG 1 cut(s) 231
HpySE526I ACGT 1 cut(s) 197
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 2 cut(s) 163, 303
Lsp1109I GCAGC 2 cut(s) 71, 74
LweI GCATC 1 cut(s) 105
MaeI CTAG 2 cut(s) 36, 282
MaeII ACGT 1 cut(s) 197
MboII GAAGA 3 cut(s) 262, 340, 343
MluCI AATT 3 cut(s) 71, 205, 342
MnlI CCTC 2 cut(s) 155, 258
Mva1269I GAATGC 2 cut(s) 230, 285
MwoI GCNNNNNNNGC 1 cut(s) 210
NdeI CATATG 1 cut(s) 190
NheI GCTAGC 1 cut(s) 35
NspV TTCGAA 1 cut(s) 126
PctI GAATGC 2 cut(s) 230, 285
PkrI GCNGC 2 cut(s) 61, 64
PstNI CAGNNNCTG 1 cut(s) 68
SatI GCNGC 2 cut(s) 60, 63
SetI ASST 3 cut(s) 108, 182, 200
SfaNI GCATC 1 cut(s) 105
SfuI TTCGAA 1 cut(s) 126
Sse9I AATT 3 cut(s) 71, 205, 342
SspMI CTAG 2 cut(s) 36, 282
TaiI ACGT 1 cut(s) 200
TaqI TCGA 1 cut(s) 126
TasI AATT 3 cut(s) 71, 205, 342
TseI GCWGC 2 cut(s) 59, 62
XapI RAATTY 1 cut(s) 71
XspI CTAG 2 cut(s) 36, 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.