Prupe.4G146100_v2.0.a1

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000304
Physical Location & Seq
Forward (+)
8395358 .. 8396817
1460 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G146100.1

Sequence Viewer

Length: 663 bp
ATGGCGGACGAGGTTGTTCTTTTGGACTTCTGGCCAAGCATGTTTGGGATGAGGGTGAGAGTTGCGCTGGCTGAGAAGGGTGTCAAGTATGAGTCCAGAGAGGAGGATTTGCTTTACAACAAGAGTCCACTACTTCTGCAGATGAACCCGTTTCACAAGAAAATCCCGGTTCTCATCCACAACGGAAAACCCGTCTGCGAGTCAGCCAACATTGTGCAATACATTGATGAGGCTTGGAAGGACAAAGCTCCTTTGCTTCCCTCTGATCCTTACCAGAGAGCTCAGGCCAGGTTTTGGGTTAGTTACATTGATAAGAATTTATACGAGGCTGGGAAGAATATATGGGCCACAAAAGGAAAAGAACAAGAGGCAGCCAAGAAGAAATTGATCGAAATTCTTAAGCTGTTGGAAGGGCAGCTTGGAGACAATACTTATTTTGGGGGTGAGATATTTGGGTTCTTGGACGTTGCCCTAGTCACATTCTACAGCTGGTTTTTTTCCTATGAGACATGTGGAAACTTTAGCATAGAGGCAGAGTGCCCTAAATTGATTGAATGGGCCAAGAGGTGCATGCAGAAGGAGAGTGTGGCCAAATCTGTTGCTGAACCAAAAAAGGTGTATGAGTTTACTCTTCTGCTGAAGAAGATGTTTGGTAAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

221

Amino Acids

25.42

Weight (kDa)

7.58

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 294
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 260
AcoI YGGCCR 2 cut(s) 32, 588
AcsI RAATTY 2 cut(s) 316, 393
AcuI CTGAAG 1 cut(s) 659
AfiI CCNNNNNNNGG 1 cut(s) 294
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 1 cut(s) 509
AgsI TTSAA 1 cut(s) 554
AjnI CCWGG 1 cut(s) 287
AjuI GAANNNNNNNTTGG 2 cut(s) 402, 434
AluBI AGCT 5 cut(s) 248, 281, 403, 418, 489
AluI AGCT 5 cut(s) 248, 281, 403, 418, 489
Alw21I GWGCWC 1 cut(s) 283
Alw26I GTCTC 2 cut(s) 417, 500
AlwI GGATC 1 cut(s) 260
AoxI GGCC 5 cut(s) 32, 285, 345, 558, 588
ApeKI GCWGC 2 cut(s) 371, 415
ApoI RAATTY 2 cut(s) 316, 393
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 2 cut(s) 345, 558
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 2 cut(s) 67, 455
BaeGI GKGCMC 1 cut(s) 542
BalI TGGCCA 2 cut(s) 34, 590
BanII GRGCYC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 283
BbvI GCAGC 2 cut(s) 383, 427
BciT130I CCWGG 1 cut(s) 289
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 2 cut(s) 417, 500
BfaI CTAG 1 cut(s) 473
BfmI CTRYAG 2 cut(s) 137, 484
BfrI CTTAAG 1 cut(s) 398
BisI GCNGC 2 cut(s) 372, 416
BlsI GCNGC 2 cut(s) 373, 417
Bme1390I CCNGG 2 cut(s) 167, 289
BmgT120I GGNCC 2 cut(s) 345, 558
BmrFI CCNGG 2 cut(s) 167, 289
Bpu10I CCTNAGC 1 cut(s) 282
BpuMI CCSGG 1 cut(s) 167
Bsc4I CCNNNNNNNGG 1 cut(s) 294
BseBI CCWGG 1 cut(s) 289
BseGI GGATG 2 cut(s) 54, 174
BseLI CCNNNNNNNGG 1 cut(s) 294
BseMII CTCAG 2 cut(s) 63, 296
BseRI GAGGAG 1 cut(s) 116
BseSI GKGCMC 1 cut(s) 542
BseXI GCAGC 2 cut(s) 383, 427
BseYI CCCAGC 1 cut(s) 329
BshFI GGCC 5 cut(s) 34, 287, 347, 560, 590
BsiHKAI GWGCWC 1 cut(s) 283
BsiSI CCGG 1 cut(s) 167
BslI CCNNNNNNNGG 1 cut(s) 294
BsmAI GTCTC 2 cut(s) 417, 500
BsnI GGCC 5 cut(s) 34, 287, 347, 560, 590
Bsp1286I GDGCHC 2 cut(s) 283, 542
Bsp143I GATC 2 cut(s) 265, 387
BspACI CCGC 1 cut(s) 5
BspANI GGCC 5 cut(s) 34, 287, 347, 560, 590
BspCNI CTCAG 2 cut(s) 64, 295
BspMAI CTGCAG 1 cut(s) 141
BspPI GGATC 1 cut(s) 260
BspTI CTTAAG 1 cut(s) 398
BssMI GATC 2 cut(s) 265, 387
Bst2UI CCWGG 1 cut(s) 289
Bst6I CTCTTC 1 cut(s) 636
BstAFI CTTAAG 1 cut(s) 398
BstC8I GCNNGC 2 cut(s) 69, 572
BstDEI CTNAG 2 cut(s) 72, 282
BstF5I GGATG 2 cut(s) 54, 174
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 2 cut(s) 268, 390
BstMAI GTCTC 2 cut(s) 417, 500
BstMBI GATC 2 cut(s) 265, 387
BstNI CCWGG 1 cut(s) 289
BstNSI RCATGY 3 cut(s) 43, 513, 574
BstSCI CCNGG 2 cut(s) 165, 287
BstSFI CTRYAG 2 cut(s) 137, 484
BstSLI GKGCMC 1 cut(s) 542
BstV1I GCAGC 2 cut(s) 383, 427
BsuRI GGCC 5 cut(s) 34, 287, 347, 560, 590
BtsCI GGATG 2 cut(s) 54, 174
Cac8I GCNNGC 2 cut(s) 69, 572
CfoI GCGC 1 cut(s) 67
Cfr13I GGNCC 2 cut(s) 345, 558
CviAII CATG 3 cut(s) 40, 510, 571
DdeI CTNAG 2 cut(s) 72, 282
DpnI GATC 2 cut(s) 267, 389
DpnII GATC 2 cut(s) 265, 387
EaeI YGGCCR 2 cut(s) 32, 588
Eam1104I CTCTTC 1 cut(s) 636
EarI CTCTTC 1 cut(s) 636
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 281
Eco24I GRGCYC 1 cut(s) 283
Eco53kI GAGCTC 1 cut(s) 281
Eco57I CTGAAG 1 cut(s) 659
EcoICRI GAGCTC 1 cut(s) 281
EcoRII CCWGG 1 cut(s) 287
EcoT38I GRGCYC 1 cut(s) 283
FaeI CATG 3 cut(s) 43, 513, 574
FalI AAGNNNNNCTT 2 cut(s) 402, 434
FatI CATG 3 cut(s) 39, 509, 570
Fnu4HI GCNGC 2 cut(s) 372, 416
FokI GGATG 2 cut(s) 61, 161
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 2 cut(s) 372, 416
FspBI CTAG 1 cut(s) 473
GlaI GCGC 1 cut(s) 66
GluI GCNGC 2 cut(s) 372, 416
GsaI CCCAGC 1 cut(s) 333
HaeIII GGCC 5 cut(s) 34, 287, 347, 560, 590
HapII CCGG 1 cut(s) 167
HhaI GCGC 1 cut(s) 67
Hin1II CATG 3 cut(s) 43, 513, 574
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HinfI GANTC 3 cut(s) 92, 124, 200
HpaII CCGG 1 cut(s) 167
HphI GGTGA 2 cut(s) 67, 455
Hpy166II GTNNAC 2 cut(s) 128, 627
Hpy188I TCNGA 1 cut(s) 265
Hpy188III TCNNGA 1 cut(s) 96
Hpy8I GTNNAC 2 cut(s) 128, 627
HpyAV CCTTC 4 cut(s) 70, 232, 404, 571
HpyCH4IV ACGT 1 cut(s) 465
HpyCH4V TGCA 4 cut(s) 139, 217, 570, 574
HpyF3I CTNAG 2 cut(s) 72, 282
HpySE526I ACGT 1 cut(s) 465
Hsp92II CATG 3 cut(s) 43, 513, 574
HspAI GCGC 1 cut(s) 65
Kzo9I GATC 2 cut(s) 265, 387
LmnI GCTCC 1 cut(s) 253
Lsp1109I GCAGC 2 cut(s) 383, 427
MaeI CTAG 1 cut(s) 473
MaeII ACGT 1 cut(s) 465
MaeIII GTNAC 2 cut(s) 302, 475
MalI GATC 2 cut(s) 267, 389
MboI GATC 2 cut(s) 265, 387
MboII GAAGA 5 cut(s) 346, 391, 623, 652, 655
MhlI GDGCHC 2 cut(s) 283, 542
MlsI TGGCCA 2 cut(s) 34, 590
MluCI AATT 4 cut(s) 316, 383, 393, 545
MluNI TGGCCA 2 cut(s) 34, 590
MlyI GAGTC 3 cut(s) 101, 133, 209
MmeI TCCRAC 1 cut(s) 387
Mox20I TGGCCA 2 cut(s) 34, 590
MscI TGGCCA 2 cut(s) 34, 590
MseI TTAA 1 cut(s) 399
Msp20I TGGCCA 2 cut(s) 34, 590
MspA1I CMGCKG 1 cut(s) 489
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 1 cut(s) 167
MspR9I CCNGG 2 cut(s) 167, 289
MvaI CCWGG 1 cut(s) 289
NciI CCSGG 1 cut(s) 167
NdeII GATC 2 cut(s) 265, 387
NlaIII CATG 3 cut(s) 43, 513, 574
NmuCI GTSAC 1 cut(s) 475
NspI RCATGY 3 cut(s) 43, 513, 574
PaeI GCATGC 1 cut(s) 574
PciI ACATGT 1 cut(s) 509
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PflMI CCANNNNNTGG 1 cut(s) 294
PkrI GCNGC 2 cut(s) 373, 417
PleI GAGTC 3 cut(s) 100, 132, 208
PpsI GAGTC 3 cut(s) 100, 132, 208
PscI ACATGT 1 cut(s) 509
Psp124BI GAGCTC 1 cut(s) 283
Psp6I CCWGG 1 cut(s) 287
PspFI CCCAGC 1 cut(s) 329
PspGI CCWGG 1 cut(s) 287
PspPI GGNCC 2 cut(s) 345, 558
PstI CTGCAG 1 cut(s) 141
PvuII CAGCTG 1 cut(s) 489
SacI GAGCTC 1 cut(s) 283
SaqAI TTAA 1 cut(s) 399
SatI GCNGC 2 cut(s) 372, 416
Sau3AI GATC 2 cut(s) 265, 387
Sau96I GGNCC 2 cut(s) 345, 558
SchI GAGTC 3 cut(s) 101, 133, 209
ScrFI CCNGG 2 cut(s) 167, 289
SduI GDGCHC 2 cut(s) 283, 542
SfcI CTRYAG 2 cut(s) 137, 484
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SphI GCATGC 1 cut(s) 574
Sse9I AATT 4 cut(s) 316, 383, 393, 545
SsiI CCGC 1 cut(s) 5
SspMI CTAG 1 cut(s) 473
SstI GAGCTC 1 cut(s) 283
StyD4I CCNGG 2 cut(s) 165, 287
TaiI ACGT 1 cut(s) 468
TaqI TCGA 1 cut(s) 390
TasI AATT 4 cut(s) 316, 383, 393, 545
Tru1I TTAA 1 cut(s) 399
Tru9I TTAA 1 cut(s) 399
TseFI GTSAC 1 cut(s) 475
TseI GCWGC 2 cut(s) 371, 415
Tsp45I GTSAC 1 cut(s) 475
TspDTI ATGAA 1 cut(s) 158
TspGWI ACGGA 1 cut(s) 198
Van91I CCANNNNNTGG 1 cut(s) 294
Vha464I CTTAAG 1 cut(s) 398
XapI RAATTY 2 cut(s) 316, 393
XceI RCATGY 3 cut(s) 43, 513, 574
XspI CTAG 1 cut(s) 473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.