AT1G78370

Glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000304
Physical Location & Seq
Reverse (-)
29484120 .. 29485389
1270 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78370.1

Sequence Viewer

Length: 654 bp
ATGGCGAACCTACCGATTCTTTTGGATTACTGGCCAAGTATGTTCGGGATGAGGGCTAGAGTTGCGTTGCGAGAGAAAGGTGTTGAGTTTGAATACAGAGAGGAAGATTTCTCGAACAAGAGCCCTTTACTCCTCCAGAGTAATCCCATTCACAAGAAAATCCCGGTTCTGGTCCACAACGGTAAACCGGTATGTGAATCTCTTAACGTTGTCCAGTACGTCGACGAGGCTTGGCCCGAGAAGAACCCGTTCTTCCCTTCCGATCCTTACGGGAGAGCTCAGGCTCGATTCTGGGCTGATTTCGTGGACAAGAAGTTCACCGACGCCCAATTCAAGGTATGGGGGAAGAAAGGTGAGGAACAAGAAGCAGGCAAGAAGGAATTTATTGAGGCAGTGAAGATTCTTGAATCTGAGCTAGGAGATAAACCTTACTTTGGTGGAGATAGCTTTGGGTATGTAGACATTTCCTTGATTACATTCTCGAGTTGGTTCCAAGCCTATGAGAAGTTTGGTAACTTTAGCATCGAGTCAGAGAGTCCGAAACTGATCGCTTGGGCAAAGCGGTGCATGGAGAAAGAGAGTGTGTCTAAGTCTCTCCCTGACTCTGAGAAGATTGTTGCATATGCTGCTGAGTATAGGAAGAACAATCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

217

Amino Acids

25.01

Weight (kDa)

5.63

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 7 - 76 3.5e-18 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 13 - 80 7.5e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 1.9e-11 Glutathione S-transferase, N-terminal domain
GST_C PF00043 116 - 192 6.3e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 121 - 188 8.6e-11 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 222, 459
AciI CCGC 1 cut(s) 562
AclI AACGTT 1 cut(s) 207
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 1 cut(s) 380
AcyI GRCGYC 1 cut(s) 324
AfaI GTAC 1 cut(s) 218
AfiI CCNNNNNNNGG 3 cut(s) 169, 334, 434
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 3 cut(s) 92, 334, 407
AloI GAACNNNNNNTCC 2 cut(s) 299, 331
AluBI AGCT 3 cut(s) 278, 415, 447
AluI AGCT 3 cut(s) 278, 415, 447
Alw21I GWGCWC 1 cut(s) 280
Alw26I GTCTC 1 cut(s) 597
AlwI GGATC 1 cut(s) 257
Ama87I CYCGRG 2 cut(s) 236, 481
AoxI GGCC 2 cut(s) 32, 233
ApeKI GCWGC 1 cut(s) 626
ApoI RAATTY 1 cut(s) 380
AsiGI ACCGGT 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 248
AspS9I GGNCC 2 cut(s) 172, 234
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 2 cut(s) 310, 365
AvaI CYCGRG 2 cut(s) 236, 481
AvaII GGWCC 1 cut(s) 172
BalI TGGCCA 1 cut(s) 34
BanII GRGCYC 2 cut(s) 125, 280
Bbv12I GWGCWC 1 cut(s) 280
BbvI GCAGC 1 cut(s) 613
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 1 cut(s) 597
BfaI CTAG 2 cut(s) 57, 416
BisI GCNGC 1 cut(s) 627
BlsI GCNGC 1 cut(s) 628
Bme1390I CCNGG 1 cut(s) 164
Bme18I GGWCC 1 cut(s) 172
BmeT110I CYCGRG 2 cut(s) 236, 481
BmgT120I GGNCC 2 cut(s) 172, 234
BmiI GGNNCC 1 cut(s) 491
BmrFI CCNGG 1 cut(s) 164
BmsI GCATC 1 cut(s) 531
BpmI CTGGAG 1 cut(s) 119
Bpu10I CCTNAGC 1 cut(s) 279
BpuMI CCSGG 1 cut(s) 164
BsaHI GRCGYC 1 cut(s) 324
BsaWI WCCGGW 1 cut(s) 187
Bsc4I CCNNNNNNNGG 3 cut(s) 169, 334, 434
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 2 cut(s) 35, 214
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 3 cut(s) 169, 334, 434
BseMII CTCAG 4 cut(s) 293, 402, 597, 621
BseNI ACTGG 2 cut(s) 35, 214
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 1 cut(s) 613
BshFI GGCC 2 cut(s) 34, 235
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 280
BsiHKCI CYCGRG 2 cut(s) 236, 481
BsiSI CCGG 2 cut(s) 164, 188
BslI CCNNNNNNNGG 3 cut(s) 169, 334, 434
BsmAI GTCTC 1 cut(s) 597
BsnI GGCC 2 cut(s) 34, 235
BsoBI CYCGRG 2 cut(s) 236, 481
Bsp1286I GDGCHC 2 cut(s) 125, 280
Bsp143I GATC 2 cut(s) 262, 546
BspACI CCGC 1 cut(s) 562
BspANI GGCC 2 cut(s) 34, 235
BspCNI CTCAG 4 cut(s) 292, 403, 598, 622
BspLI GGNNCC 1 cut(s) 491
BspPI GGATC 1 cut(s) 257
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 2 cut(s) 35, 214
BssAI RCCGGY 1 cut(s) 187
BssMI GATC 2 cut(s) 262, 546
BssNI GRCGYC 1 cut(s) 324
Bst4CI ACNGT 1 cut(s) 182
BstACI GRCGYC 1 cut(s) 324
BstAPI GCANNNNNTGC 1 cut(s) 626
BstC8I GCNNGC 1 cut(s) 370
BstDEI CTNAG 5 cut(s) 279, 411, 588, 606, 630
BstF5I GGATG 1 cut(s) 54
BstKTI GATC 2 cut(s) 265, 549
BstMAI GTCTC 1 cut(s) 597
BstMBI GATC 2 cut(s) 262, 546
BstMWI GCNNNNNNNGC 2 cut(s) 62, 626
BstSCI CCNGG 1 cut(s) 162
BstV1I GCAGC 1 cut(s) 613
BsuRI GGCC 2 cut(s) 34, 235
BtsCI GGATG 1 cut(s) 54
BtsI GCAGTG 1 cut(s) 399
BtsIMutI CAGTG 1 cut(s) 399
Cac8I GCNNGC 1 cut(s) 370
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 2 cut(s) 172, 234
CseI GACGC 1 cut(s) 332
Csp6I GTAC 1 cut(s) 217
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 1 cut(s) 568
CviQI GTAC 1 cut(s) 217
DdeI CTNAG 5 cut(s) 279, 411, 588, 606, 630
DpnI GATC 2 cut(s) 264, 548
DpnII GATC 2 cut(s) 262, 546
EaeI YGGCCR 1 cut(s) 32
Ecl136II GAGCTC 1 cut(s) 278
Eco24I GRGCYC 2 cut(s) 125, 280
Eco47I GGWCC 1 cut(s) 172
Eco53kI GAGCTC 1 cut(s) 278
Eco88I CYCGRG 2 cut(s) 236, 481
EcoICRI GAGCTC 1 cut(s) 278
EcoT38I GRGCYC 2 cut(s) 125, 280
FaeI CATG 1 cut(s) 571
FaiI YATR 9 cut(s) 41, 193, 340, 456, 501, 569, 622, 624, 636
FatI CATG 1 cut(s) 567
FauNDI CATATG 1 cut(s) 622
FblI GTMKAC 2 cut(s) 222, 459
Fnu4HI GCNGC 1 cut(s) 627
FokI GGATG 1 cut(s) 61
FriOI GRGCYC 2 cut(s) 125, 280
Fsp4HI GCNGC 1 cut(s) 627
FspBI CTAG 2 cut(s) 57, 416
GluI GCNGC 1 cut(s) 627
GsuI CTGGAG 1 cut(s) 119
HaeIII GGCC 2 cut(s) 34, 235
HapII CCGG 2 cut(s) 164, 188
HgaI GACGC 1 cut(s) 332
Hin1I GRCGYC 1 cut(s) 324
Hin1II CATG 1 cut(s) 571
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HinfI GANTC 8 cut(s) 16, 197, 288, 400, 407, 527, 535, 602
HpaII CCGG 2 cut(s) 164, 188
HphI GGTGA 2 cut(s) 310, 365
Hpy166II GTNNAC 6 cut(s) 175, 185, 223, 307, 318, 460
Hpy188I TCNGA 6 cut(s) 262, 412, 532, 540, 607, 653
Hpy188III TCNNGA 5 cut(s) 46, 112, 136, 404, 481
Hpy8I GTNNAC 6 cut(s) 175, 185, 223, 307, 318, 460
Hpy99I CGWCG 3 cut(s) 224, 227, 326
HpyAV CCTTC 2 cut(s) 267, 370
HpyCH4III ACNGT 1 cut(s) 182
HpyCH4IV ACGT 2 cut(s) 207, 219
HpyCH4V TGCA 2 cut(s) 567, 620
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 626
HpyF3I CTNAG 5 cut(s) 279, 411, 588, 606, 630
HpySE526I ACGT 2 cut(s) 207, 219
Hsp92I GRCGYC 1 cut(s) 324
Hsp92II CATG 1 cut(s) 571
Kzo9I GATC 2 cut(s) 262, 546
Lsp1109I GCAGC 1 cut(s) 613
LweI GCATC 1 cut(s) 531
MaeI CTAG 2 cut(s) 57, 416
MaeII ACGT 2 cut(s) 207, 219
MaeIII GTNAC 1 cut(s) 512
MalI GATC 2 cut(s) 264, 548
MboI GATC 2 cut(s) 262, 546
MboII GAAGA 7 cut(s) 116, 244, 253, 358, 409, 622, 652
MhlI GDGCHC 2 cut(s) 125, 280
MlsI TGGCCA 1 cut(s) 34
MluCI AATT 2 cut(s) 329, 380
MluNI TGGCCA 1 cut(s) 34
MlyI GAGTC 3 cut(s) 536, 544, 596
MnlI CCTC 6 cut(s) 45, 94, 143, 220, 349, 382
Mox20I TGGCCA 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 248
MscI TGGCCA 1 cut(s) 34
MseI TTAA 1 cut(s) 204
Msp20I TGGCCA 1 cut(s) 34
MspI CCGG 2 cut(s) 164, 188
MspR9I CCNGG 1 cut(s) 164
MwoI GCNNNNNNNGC 2 cut(s) 62, 626
NciI CCSGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 622
NdeII GATC 2 cut(s) 262, 546
NlaIII CATG 1 cut(s) 571
NlaIV GGNNCC 1 cut(s) 491
PaeR7I CTCGAG 1 cut(s) 481
PdmI GAANNNNTTC 1 cut(s) 248
PfeI GAWTC 5 cut(s) 16, 197, 288, 400, 407
PinAI ACCGGT 1 cut(s) 187
PkrI GCNGC 1 cut(s) 628
PleI GAGTC 3 cut(s) 535, 543, 596
PpsI GAGTC 3 cut(s) 535, 543, 596
Psp124BI GAGCTC 1 cut(s) 280
Psp1406I AACGTT 1 cut(s) 207
PspN4I GGNNCC 1 cut(s) 491
PspPI GGNCC 2 cut(s) 172, 234
RsaI GTAC 1 cut(s) 218
RsaNI GTAC 1 cut(s) 217
SacI GAGCTC 1 cut(s) 280
SalI GTCGAC 1 cut(s) 221
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 1 cut(s) 627
Sau3AI GATC 2 cut(s) 262, 546
Sau96I GGNCC 2 cut(s) 172, 234
SchI GAGTC 3 cut(s) 536, 544, 596
ScrFI CCNGG 1 cut(s) 164
SduI GDGCHC 2 cut(s) 125, 280
SfaNI GCATC 1 cut(s) 531
Sfr274I CTCGAG 1 cut(s) 481
SgrDI CGTCGACG 1 cut(s) 221
SinI GGWCC 1 cut(s) 172
SlaI CTCGAG 1 cut(s) 481
SmlI CTYRAG 1 cut(s) 481
SmoI CTYRAG 1 cut(s) 481
Sse9I AATT 2 cut(s) 329, 380
SsiI CCGC 1 cut(s) 562
SspMI CTAG 2 cut(s) 57, 416
SstI GAGCTC 1 cut(s) 280
StyD4I CCNGG 1 cut(s) 162
TaaI ACNGT 1 cut(s) 182
TaiI ACGT 2 cut(s) 210, 222
TaqI TCGA 5 cut(s) 113, 222, 286, 482, 525
TasI AATT 2 cut(s) 329, 380
TfiI GAWTC 5 cut(s) 16, 197, 288, 400, 407
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 1 cut(s) 399
TseI GCWGC 1 cut(s) 626
TspRI CASTG 1 cut(s) 399
VpaK11BI GGWCC 1 cut(s) 172
XapI RAATTY 1 cut(s) 380
XhoI CTCGAG 1 cut(s) 481
XmiI GTMKAC 2 cut(s) 222, 459
XmnI GAANNNNTTC 1 cut(s) 248
XspI CTAG 2 cut(s) 57, 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.