AT1G78340

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
29472845 .. 29474003
1159 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78340.1

Sequence Viewer

Length: 657 bp
ATGGCGGATGAAGTGATACTTTTGGATTTTTGGCCGAGTCCATTCGGAGTAAGAGCGAGAATCGCGCTGAGAGAGAAAGGAGTTGAGTTTGAGTACAGAGAAGAGAATCTGAGAGACAAGAGCCCTTTGCTTCTCCAGATGAATCCGGTTCACAAGAAGATTCCGGTTCTCATCCACAATGGTAAACCGGTTTGTGAATCCATGAACGTTGTTCAGTACATCGACGAGGTTTGGTCCGACAAAAACCCAATCCTTCCTTCTGATCCTTACCAGAGAGCTCAAGCCAGATTTTGGGTTGATTTCGTGGACACCAAGCTGTTTGAGCCAGCGGATAAGATTTGGCAAACGAAAGGAGAGGAACAAGAGACAGCCAAGAAAGAGTATATAGAAGCACTCAAGATTCTTGAAACTGAGCTTGGAGACAAACCTTACTTTGGTGGAGATACCTTCGGGTTCGTAGACATTGCCATGACTGGATATTACAGCTGGTTCGAAGCATCAGAGAAACTAGCTAACTTCAGCATCGAACCAGAGTGTCCCACACTGATGGCTTCGGCTAAGAGGTGTTTGCAGAGAGAAAGCGTGGTTCAGTCCCTTCATGATTCTGAGAAAATCCTTGCGTTTGCCTATAAGATTAGGAAGATATACTGTGTCTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

218

Amino Acids

25.28

Weight (kDa)

5.17

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 4e-19 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 76 2.2e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 1.4e-13 Glutathione S-transferase, N-terminal domain
GST_C PF00043 115 - 192 2.7e-07 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 122 - 169 4.3e-07 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 291
AccI GTMKAC 1 cut(s) 459
AccII CGCG 1 cut(s) 65
AciI CCGC 2 cut(s) 5, 329
AclI AACGTT 1 cut(s) 207
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 1 cut(s) 32
AcuI CTGAAG 1 cut(s) 502
AfaI GTAC 2 cut(s) 95, 218
AfiI CCNNNNNNNGG 2 cut(s) 291, 434
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 1 cut(s) 407
AjuI GAANNNNNNNTTGG 4 cut(s) 241, 273, 399, 431
AluBI AGCT 5 cut(s) 278, 316, 415, 486, 512
AluI AGCT 5 cut(s) 278, 316, 415, 486, 512
Alw21I GWGCWC 1 cut(s) 280
Alw26I GTCTC 3 cut(s) 108, 359, 414
AlwI GGATC 1 cut(s) 257
AoxI GGCC 1 cut(s) 32
AsiGI ACCGGT 1 cut(s) 187
AspLEI GCGC 1 cut(s) 67
AspS9I GGNCC 1 cut(s) 234
AsuII TTCGAA 1 cut(s) 492
AvaII GGWCC 1 cut(s) 234
BanII GRGCYC 2 cut(s) 125, 280
Bbv12I GWGCWC 1 cut(s) 280
BccI CCATC 1 cut(s) 541
BcoDI GTCTC 3 cut(s) 108, 359, 414
BfaI CTAG 1 cut(s) 509
Bme18I GGWCC 1 cut(s) 234
BmgT120I GGNCC 1 cut(s) 234
BmsI GCATC 2 cut(s) 506, 531
BpmI CTGGAG 1 cut(s) 119
Bpu14I TTCGAA 1 cut(s) 492
BpuEI CTTGAG 2 cut(s) 264, 380
BsaWI WCCGGW 3 cut(s) 145, 163, 187
Bsc4I CCNNNNNNNGG 2 cut(s) 291, 434
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 1 cut(s) 478
Bse3DI GCAATG 1 cut(s) 462
BseGI GGATG 2 cut(s) 13, 171
BseLI CCNNNNNNNGG 2 cut(s) 291, 434
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 4 cut(s) 59, 101, 402, 597
BseNI ACTGG 1 cut(s) 478
Bsh1236I CGCG 1 cut(s) 65
BshFI GGCC 1 cut(s) 34
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 280
BsiSI CCGG 3 cut(s) 146, 164, 188
BslFI GGGAC 2 cut(s) 522, 577
BslI CCNNNNNNNGG 2 cut(s) 291, 434
BsmAI GTCTC 3 cut(s) 108, 359, 414
BsmFI GGGAC 2 cut(s) 522, 577
BsnI GGCC 1 cut(s) 34
Bsp119I TTCGAA 1 cut(s) 492
Bsp1286I GDGCHC 2 cut(s) 125, 280
Bsp143I GATC 1 cut(s) 262
BspACI CCGC 2 cut(s) 5, 329
BspANI GGCC 1 cut(s) 34
BspCNI CTCAG 4 cut(s) 60, 102, 403, 598
BspFNI CGCG 1 cut(s) 65
BspHI TCATGA 1 cut(s) 598
BspPI GGATC 1 cut(s) 257
BspT104I TTCGAA 1 cut(s) 492
BsrDI GCAATG 1 cut(s) 462
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 1 cut(s) 478
BssAI RCCGGY 1 cut(s) 187
BssMI GATC 1 cut(s) 262
Bst4CI ACNGT 1 cut(s) 650
Bst6I CTCTTC 1 cut(s) 96
BstBI TTCGAA 1 cut(s) 492
BstC8I GCNNGC 1 cut(s) 327
BstDEI CTNAG 5 cut(s) 68, 110, 411, 558, 606
BstF5I GGATG 2 cut(s) 13, 171
BstFNI CGCG 1 cut(s) 65
BstHHI GCGC 1 cut(s) 67
BstKTI GATC 1 cut(s) 265
BstMAI GTCTC 3 cut(s) 108, 359, 414
BstMBI GATC 1 cut(s) 262
BstMWI GCNNNNNNNGC 2 cut(s) 62, 322
BstUI CGCG 1 cut(s) 65
BstXI CCANNNNNNTGG 1 cut(s) 547
BsuRI GGCC 1 cut(s) 34
BtsCI GGATG 2 cut(s) 13, 171
BtsIMutI CAGTG 1 cut(s) 542
Cac8I GCNNGC 1 cut(s) 327
CciI TCATGA 1 cut(s) 598
CfoI GCGC 1 cut(s) 67
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 1 cut(s) 234
Csp6I GTAC 2 cut(s) 94, 217
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 3 cut(s) 202, 469, 599
CviQI GTAC 2 cut(s) 94, 217
DdeI CTNAG 5 cut(s) 68, 110, 411, 558, 606
DpnI GATC 1 cut(s) 264
DpnII GATC 1 cut(s) 262
EaeI YGGCCR 1 cut(s) 32
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 278
Eco24I GRGCYC 2 cut(s) 125, 280
Eco47I GGWCC 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 278
Eco57I CTGAAG 1 cut(s) 502
EcoICRI GAGCTC 1 cut(s) 278
EcoT38I GRGCYC 2 cut(s) 125, 280
FaeI CATG 3 cut(s) 205, 472, 602
FaiI YATR 7 cut(s) 203, 384, 386, 470, 600, 630, 646
FalI AAGNNNNNCTT 1 cut(s) 35
FaqI GGGAC 2 cut(s) 522, 577
FatI CATG 3 cut(s) 201, 468, 598
FblI GTMKAC 1 cut(s) 459
FokI GGATG 2 cut(s) 20, 158
FriOI GRGCYC 2 cut(s) 125, 280
FspBI CTAG 1 cut(s) 509
GlaI GCGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 119
HaeIII GGCC 1 cut(s) 34
HapII CCGG 3 cut(s) 146, 164, 188
HhaI GCGC 1 cut(s) 67
Hin1II CATG 3 cut(s) 205, 472, 602
Hin6I GCGC 1 cut(s) 65
HinP1I GCGC 1 cut(s) 65
HinfI GANTC 8 cut(s) 37, 60, 106, 142, 160, 197, 400, 602
HpaII CCGG 3 cut(s) 146, 164, 188
Hpy166II GTNNAC 4 cut(s) 151, 185, 307, 460
Hpy188I TCNGA 6 cut(s) 47, 111, 238, 262, 502, 607
Hpy188III TCNNGA 4 cut(s) 136, 397, 404, 599
Hpy8I GTNNAC 4 cut(s) 151, 185, 307, 460
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 4 cut(s) 263, 267, 457, 605
HpyCH4III ACNGT 1 cut(s) 650
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 1 cut(s) 571
HpyF10VI GCNNNNNNNGC 2 cut(s) 62, 322
HpyF3I CTNAG 5 cut(s) 68, 110, 411, 558, 606
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 3 cut(s) 205, 472, 602
HspAI GCGC 1 cut(s) 65
Kzo9I GATC 1 cut(s) 262
LweI GCATC 2 cut(s) 506, 531
MaeI CTAG 1 cut(s) 509
MaeII ACGT 1 cut(s) 207
MalI GATC 1 cut(s) 264
MboI GATC 1 cut(s) 262
MboII GAAGA 3 cut(s) 113, 169, 652
MhlI GDGCHC 2 cut(s) 125, 280
MlyI GAGTC 1 cut(s) 46
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 3 cut(s) 220, 349, 555
MslI CAYNNNNRTG 2 cut(s) 467, 545
MspA1I CMGCKG 2 cut(s) 329, 486
MspI CCGG 3 cut(s) 146, 164, 188
MvnI CGCG 1 cut(s) 65
MwoI GCNNNNNNNGC 2 cut(s) 62, 322
NdeII GATC 1 cut(s) 262
NlaIII CATG 3 cut(s) 205, 472, 602
NmeAIII GCCGAG 1 cut(s) 60
NspV TTCGAA 1 cut(s) 492
PagI TCATGA 1 cut(s) 598
PfeI GAWTC 7 cut(s) 60, 106, 142, 160, 197, 400, 602
PflMI CCANNNNNTGG 1 cut(s) 291
PinAI ACCGGT 1 cut(s) 187
PleI GAGTC 1 cut(s) 45
PpsI GAGTC 1 cut(s) 45
Psp124BI GAGCTC 1 cut(s) 280
Psp1406I AACGTT 1 cut(s) 207
PspPI GGNCC 1 cut(s) 234
PvuII CAGCTG 1 cut(s) 486
RsaI GTAC 2 cut(s) 95, 218
RsaNI GTAC 2 cut(s) 94, 217
RseI CAYNNNNRTG 2 cut(s) 467, 545
SacI GAGCTC 1 cut(s) 280
Sau3AI GATC 1 cut(s) 262
Sau96I GGNCC 1 cut(s) 234
SchI GAGTC 1 cut(s) 46
SduI GDGCHC 2 cut(s) 125, 280
SfaNI GCATC 2 cut(s) 506, 531
SfuI TTCGAA 1 cut(s) 492
SinI GGWCC 1 cut(s) 234
SmiMI CAYNNNNRTG 2 cut(s) 467, 545
SmlI CTYRAG 2 cut(s) 279, 395
SmoI CTYRAG 2 cut(s) 279, 395
SsiI CCGC 2 cut(s) 5, 329
SspMI CTAG 1 cut(s) 509
SstI GAGCTC 1 cut(s) 280
TaaI ACNGT 1 cut(s) 650
TaiI ACGT 1 cut(s) 210
TaqI TCGA 3 cut(s) 222, 492, 525
TatI WGTACW 2 cut(s) 93, 216
TfiI GAWTC 7 cut(s) 60, 106, 142, 160, 197, 400, 602
TscAI CASTG 1 cut(s) 549
TspDTI ATGAA 4 cut(s) 24, 155, 218, 587
TspRI CASTG 1 cut(s) 549
Van91I CCANNNNNTGG 1 cut(s) 291
VpaK11BI GGWCC 1 cut(s) 234
XmiI GTMKAC 1 cut(s) 459
XspI CTAG 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.