pycom05g19600

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
22511832 .. 22512833
1002 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19600.1

Sequence Viewer

Length: 660 bp
ATGGCGAATGAGGTGGTTTTGTTGGATTTCTGGCCCAGCCCATTCGGGATGAGGCTGAGGATCGCTCTGGCTGAGAAGGGCATCGAGTATGAGTATAAAGATGAGGACTTGAGGAACAAGAGCCCACTGTTGCTGCAGATGAACCCGGTTCACAAGAAGATCCCGGTTCTCATTCACAATGGAAAGCCCGTCTGTGAGTCCCTCGTTGCGCTTCAGTACATTGATGAGGTTTGGAATGACAAGGCTCCGCTCTTGCCCTCCGACTCGTACCTCAGAGCCCAGGCCAGGTTCTGGGCTGACTTCGTTGACAAGAAGATATATGATATTGGGAGGAAGCTGTGGACAACCAAAGGAGAAGAACACGATGCAGCAAGCAAAGAATTTCTCGACTGCATCGGCGTGTTGGAAGGAGAGCTCGAAGACAAGCCCTTCTTTGGGGGGGAGACCCTCGGATTCGTGGACGTGGCGCTTATTCCATTCTATAGCTGGTTTCTTGTGTATGAAAAATTTGGCAACTTCAGTGTTGAGGCAGAGCACCCAAAGTTTATTGCCTGGGTTAAGAGGTGCATGGAGAAGGAGAGTGTGTCTAAGTCGCTTCCCGAGCAGGAAAAGGTCTACGATTTTGTCGCACTTATGAGGAAAAAGTTTGGAATTGAGTAG

Protein Analysis

220

Amino Acids

25.39

Weight (kDa)

5.3

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 3.1e-21 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 12 - 76 3.9e-13 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 1.3e-14 Glutathione S-transferase, N-terminal domain
GST_C PF00043 117 - 192 1.5e-09 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 120 - 188 1.3e-09 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 291
AccBSI CCGCTC 1 cut(s) 250
AccI GTMKAC 1 cut(s) 615
AciI CCGC 1 cut(s) 248
AclWI GGATC 2 cut(s) 68, 154
AcsI RAATTY 2 cut(s) 380, 506
AcuI CTGAAG 2 cut(s) 197, 502
AfaI GTAC 2 cut(s) 218, 269
AfiI CCNNNNNNNGG 4 cut(s) 285, 291, 434, 435
AjiI CACGTC 1 cut(s) 463
AjnI CCWGG 3 cut(s) 279, 284, 551
AluBI AGCT 3 cut(s) 337, 415, 486
AluI AGCT 3 cut(s) 337, 415, 486
Alw21I GWGCWC 2 cut(s) 417, 537
Alw26I GTCTC 1 cut(s) 437
AlwI GGATC 2 cut(s) 68, 154
AlwNI CAGNNNCTG 1 cut(s) 291
Ama87I CYCGRG 1 cut(s) 599
AoxI GGCC 2 cut(s) 32, 282
ApeKI GCWGC 2 cut(s) 133, 368
ApoI RAATTY 2 cut(s) 380, 506
AspLEI GCGC 2 cut(s) 211, 469
AspS9I GGNCC 1 cut(s) 33
AsuC2I CCSGG 2 cut(s) 146, 164
AvaI CYCGRG 1 cut(s) 599
BanII GRGCYC 3 cut(s) 125, 280, 417
BbsI GAAGAC 1 cut(s) 426
Bbv12I GWGCWC 2 cut(s) 417, 537
BbvCI CCTCAGC 1 cut(s) 56
BbvI GCAGC 2 cut(s) 120, 380
BciT130I CCWGG 3 cut(s) 281, 286, 553
BcnI CCSGG 2 cut(s) 146, 164
BcoDI GTCTC 1 cut(s) 437
BfmI CTRYAG 2 cut(s) 134, 481
BfoI RGCGCY 1 cut(s) 470
BisI GCNGC 2 cut(s) 134, 369
BlsI GCNGC 2 cut(s) 135, 370
Bme1390I CCNGG 5 cut(s) 146, 164, 281, 286, 553
BmeT110I CYCGRG 1 cut(s) 599
BmgBI CACGTC 1 cut(s) 463
BmgT120I GGNCC 1 cut(s) 33
BmiI GGNNCC 1 cut(s) 246
BmrFI CCNGG 5 cut(s) 146, 164, 281, 286, 553
BmsI GCATC 3 cut(s) 90, 355, 402
BpiI GAAGAC 1 cut(s) 426
BplI GAGNNNNNCTC 2 cut(s) 49, 81
Bpu10I CCTNAGC 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 130
BpuMI CCSGG 2 cut(s) 146, 164
BsaI GGTCTC 1 cut(s) 437
BsaJI CCNNGG 3 cut(s) 279, 448, 552
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 4 cut(s) 285, 291, 434, 435
BseBI CCWGG 3 cut(s) 281, 286, 553
BseDI CCNNGG 3 cut(s) 279, 448, 552
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 4 cut(s) 285, 291, 434, 435
BseMII CTCAG 3 cut(s) 47, 63, 286
BseXI GCAGC 2 cut(s) 120, 380
BseYI CCCAGC 1 cut(s) 35
BshFI GGCC 2 cut(s) 34, 284
BsiHKAI GWGCWC 2 cut(s) 417, 537
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 2 cut(s) 146, 164
BslFI GGGAC 1 cut(s) 184
BslI CCNNNNNNNGG 4 cut(s) 285, 291, 434, 435
BsmAI GTCTC 1 cut(s) 437
BsmFI GGGAC 1 cut(s) 184
BsnI GGCC 2 cut(s) 34, 284
Bso31I GGTCTC 1 cut(s) 437
BsoBI CYCGRG 1 cut(s) 599
Bsp1286I GDGCHC 4 cut(s) 125, 280, 417, 537
Bsp143I GATC 2 cut(s) 60, 159
BspACI CCGC 1 cut(s) 248
BspANI GGCC 2 cut(s) 34, 284
BspCNI CTCAG 3 cut(s) 48, 64, 285
BspLI GGNNCC 1 cut(s) 246
BspMAI CTGCAG 1 cut(s) 138
BspPI GGATC 2 cut(s) 68, 154
BspTNI GGTCTC 1 cut(s) 437
BsrBI CCGCTC 1 cut(s) 250
BssECI CCNNGG 3 cut(s) 279, 448, 552
BssMI GATC 2 cut(s) 60, 159
Bst2UI CCWGG 3 cut(s) 281, 286, 553
Bst4CI ACNGT 1 cut(s) 129
BstC8I GCNNGC 1 cut(s) 373
BstDEI CTNAG 4 cut(s) 56, 72, 272, 588
BstF5I GGATG 1 cut(s) 54
BstH2I RGCGCY 1 cut(s) 470
BstHHI GCGC 2 cut(s) 211, 469
BstKTI GATC 2 cut(s) 63, 162
BstMAI GTCTC 1 cut(s) 437
BstMBI GATC 2 cut(s) 60, 159
BstMWI GCNNNNNNNGC 1 cut(s) 601
BstNI CCWGG 3 cut(s) 281, 286, 553
BstSCI CCNGG 5 cut(s) 144, 162, 279, 284, 551
BstSFI CTRYAG 2 cut(s) 134, 481
BstV1I GCAGC 2 cut(s) 120, 380
BstV2I GAAGAC 1 cut(s) 426
BstX2I RGATCY 1 cut(s) 159
BstYI RGATCY 1 cut(s) 159
BsuRI GGCC 2 cut(s) 34, 284
BtrI CACGTC 1 cut(s) 463
BtsCI GGATG 1 cut(s) 54
BtsIMutI CAGTG 2 cut(s) 125, 526
Cac8I GCNNGC 1 cut(s) 373
CaiI CAGNNNCTG 1 cut(s) 291
CfoI GCGC 2 cut(s) 211, 469
Cfr13I GGNCC 1 cut(s) 33
Csp6I GTAC 2 cut(s) 217, 268
CviAII CATG 1 cut(s) 568
CviQI GTAC 2 cut(s) 217, 268
DdeI CTNAG 4 cut(s) 56, 72, 272, 588
DpnI GATC 2 cut(s) 62, 161
DpnII GATC 2 cut(s) 60, 159
Ecl136II GAGCTC 1 cut(s) 415
Eco24I GRGCYC 3 cut(s) 125, 280, 417
Eco31I GGTCTC 1 cut(s) 437
Eco53kI GAGCTC 1 cut(s) 415
Eco57I CTGAAG 2 cut(s) 197, 502
Eco88I CYCGRG 1 cut(s) 599
EcoICRI GAGCTC 1 cut(s) 415
EcoRII CCWGG 3 cut(s) 279, 284, 551
EcoT38I GRGCYC 3 cut(s) 125, 280, 417
FaeI CATG 1 cut(s) 571
FaiI YATR 8 cut(s) 90, 96, 319, 321, 483, 501, 569, 635
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FaqI GGGAC 1 cut(s) 184
FatI CATG 1 cut(s) 567
FblI GTMKAC 1 cut(s) 615
Fnu4HI GCNGC 2 cut(s) 134, 369
FokI GGATG 1 cut(s) 61
FriOI GRGCYC 3 cut(s) 125, 280, 417
Fsp4HI GCNGC 2 cut(s) 134, 369
GlaI GCGC 2 cut(s) 210, 468
GluI GCNGC 2 cut(s) 134, 369
GsaI CCCAGC 1 cut(s) 39
HaeII RGCGCY 1 cut(s) 470
HaeIII GGCC 2 cut(s) 34, 284
HapII CCGG 2 cut(s) 146, 164
HhaI GCGC 2 cut(s) 211, 469
Hin1II CATG 1 cut(s) 571
Hin6I GCGC 2 cut(s) 209, 467
HinP1I GCGC 2 cut(s) 209, 467
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 3 cut(s) 197, 263, 453
HpaII CCGG 2 cut(s) 146, 164
Hpy166II GTNNAC 5 cut(s) 151, 307, 342, 460, 616
Hpy188I TCNGA 3 cut(s) 262, 275, 452
Hpy188III TCNNGA 3 cut(s) 46, 386, 599
Hpy8I GTNNAC 5 cut(s) 151, 307, 342, 460, 616
HpyAV CCTTC 4 cut(s) 70, 401, 439, 568
HpyCH4III ACNGT 1 cut(s) 129
HpyCH4IV ACGT 1 cut(s) 462
HpyCH4V TGCA 4 cut(s) 136, 368, 393, 567
HpyF10VI GCNNNNNNNGC 1 cut(s) 601
HpyF3I CTNAG 4 cut(s) 56, 72, 272, 588
HpySE526I ACGT 1 cut(s) 462
Hsp92II CATG 1 cut(s) 571
HspAI GCGC 2 cut(s) 209, 467
Kzo9I GATC 2 cut(s) 60, 159
LmnI GCTCC 1 cut(s) 250
Lsp1109I GCAGC 2 cut(s) 120, 380
LweI GCATC 3 cut(s) 90, 355, 402
MaeII ACGT 1 cut(s) 462
MalI GATC 2 cut(s) 62, 161
MbiI CCGCTC 1 cut(s) 250
MboI GATC 2 cut(s) 60, 159
MboII GAAGA 4 cut(s) 169, 325, 368, 431
MflI RGATCY 1 cut(s) 159
MhlI GDGCHC 4 cut(s) 125, 280, 417, 537
MluCI AATT 3 cut(s) 380, 506, 651
MlyI GAGTC 2 cut(s) 206, 257
MmeI TCCRAC 2 cut(s) 285, 384
MseI TTAA 1 cut(s) 558
MslI CAYNNNNRTG 1 cut(s) 398
MspI CCGG 2 cut(s) 146, 164
MspR9I CCNGG 5 cut(s) 146, 164, 281, 286, 553
MvaI CCWGG 3 cut(s) 281, 286, 553
MwoI GCNNNNNNNGC 1 cut(s) 601
NciI CCSGG 2 cut(s) 146, 164
NdeII GATC 2 cut(s) 60, 159
NlaIII CATG 1 cut(s) 571
NlaIV GGNNCC 1 cut(s) 246
PfeI GAWTC 1 cut(s) 453
PflMI CCANNNNNTGG 1 cut(s) 291
PkrI GCNGC 2 cut(s) 135, 370
PleI GAGTC 2 cut(s) 205, 257
PpsI GAGTC 2 cut(s) 205, 257
Psp124BI GAGCTC 1 cut(s) 417
Psp6I CCWGG 3 cut(s) 279, 284, 551
PspFI CCCAGC 1 cut(s) 35
PspGI CCWGG 3 cut(s) 279, 284, 551
PspN4I GGNNCC 1 cut(s) 246
PspPI GGNCC 1 cut(s) 33
PstI CTGCAG 1 cut(s) 138
PstNI CAGNNNCTG 1 cut(s) 291
PsuI RGATCY 1 cut(s) 159
RsaI GTAC 2 cut(s) 218, 269
RsaNI GTAC 2 cut(s) 217, 268
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 1 cut(s) 417
SaqAI TTAA 1 cut(s) 558
SatI GCNGC 2 cut(s) 134, 369
Sau3AI GATC 2 cut(s) 60, 159
Sau96I GGNCC 1 cut(s) 33
SchI GAGTC 2 cut(s) 206, 257
ScrFI CCNGG 5 cut(s) 146, 164, 281, 286, 553
SduI GDGCHC 4 cut(s) 125, 280, 417, 537
SfaNI GCATC 3 cut(s) 90, 355, 402
SfcI CTRYAG 2 cut(s) 134, 481
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 1 cut(s) 109
SmoI CTYRAG 1 cut(s) 109
Sse9I AATT 3 cut(s) 380, 506, 651
SsiI CCGC 1 cut(s) 248
SstI GAGCTC 1 cut(s) 417
StyD4I CCNGG 5 cut(s) 144, 162, 279, 284, 551
TaaI ACNGT 1 cut(s) 129
TaiI ACGT 1 cut(s) 465
TaqI TCGA 3 cut(s) 84, 387, 417
TasI AATT 3 cut(s) 380, 506, 651
TatI WGTACW 1 cut(s) 216
TfiI GAWTC 1 cut(s) 453
Tru1I TTAA 1 cut(s) 558
Tru9I TTAA 1 cut(s) 558
TscAI CASTG 2 cut(s) 132, 526
TseI GCWGC 2 cut(s) 133, 368
TspDTI ATGAA 2 cut(s) 155, 516
TspRI CASTG 2 cut(s) 132, 526
Van91I CCANNNNNTGG 1 cut(s) 291
XapI RAATTY 2 cut(s) 380, 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 483
XmiI GTMKAC 1 cut(s) 615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.