pycom05g19620

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
22528365 .. 22529724
1360 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19620.3

Sequence Viewer

Length: 798 bp
ATGTACAAGAAAGGAAGAGAAGTTGAATACCTCCATGTACTCAATCTGCCAATCTGCTTCTTCACCCACTACTCACACTCAGAGTCACCGCTTTTTGTAACCTTAGAAACTTTGTTCAAATCTGATCAGCCTTCAATGGCGGATGAGGTGGTGTTGTTGGATTTCTGGCCAAGCCCATTTGGGATAAGACTGAGGATTGCTCTGGCTGAGAAGGGCATTGTGCATGAGTACAAAGATGAGGACTTGTCGAACAAGAGCCCACTGTTGCTGCAGATGAACCCGGTTCACAAGAAGATCGATCCGGTTCTCATTCACAATGGAAAACCGGTCTCCGAGTCCCTCATTGCGCTTCAGTACATTGACGAAGTTTGGAATCATAAGGCACCACTCTTGCCCTCTGACTCTTACCTCAGAGCCCAGGCCAGGTTCTGGGCTGACTTCGTCGACAAGAAGATTTTTGAGATTGGGAGGAAGCTTTGGGCAACCAAAGGAGAAGAACAGAATGCAGCAAAAAAAGAATTTCTCGACTGCATTGGCGTGTTAGAAAGAGAGCTTGGAGACAAGCCTTTCTTTGGGGGGGATACCCTCGGATTCGTGGACGTGACGCTTATTTCATACTATAGCTGGTTTCTTGTGTATGAGAAATTTGGCAACTTTAGTGTTGAGGCAGAGCACCCAGAATTTATTGCCTGGGTTAAGAGGTGCATGGAGAAGGAGAGCGTGTCCAAGTCGCTTCCCGAGCAGGAAAAGGTCTACGATTACGCCATGCTTTTAAGGAAAAAGCTTGGAATTGAATAG

Protein Analysis

266

Amino Acids

30.74

Weight (kDa)

5.69

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 382
AccB7I CCANNNNNTGG 1 cut(s) 429
AccI GTMKAC 2 cut(s) 444, 753
AciI CCGC 2 cut(s) 89, 140
AclWI GGATC 1 cut(s) 293
AcoI YGGCCR 1 cut(s) 167
AcsI RAATTY 3 cut(s) 518, 644, 680
AcuI CTGAAG 1 cut(s) 335
AfaI GTAC 4 cut(s) 5, 39, 230, 356
AfiI CCNNNNNNNGG 3 cut(s) 423, 429, 572
AgeI ACCGGT 1 cut(s) 325
AgsI TTSAA 4 cut(s) 26, 118, 135, 794
AjiI CACGTC 1 cut(s) 601
AjnI CCWGG 3 cut(s) 417, 422, 689
AjuI GAANNNNNNNTTGG 2 cut(s) 537, 569
AluBI AGCT 4 cut(s) 475, 553, 624, 784
AluI AGCT 4 cut(s) 475, 553, 624, 784
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 2 cut(s) 334, 552
AlwI GGATC 1 cut(s) 293
AlwNI CAGNNNCTG 1 cut(s) 429
Ama87I CYCGRG 1 cut(s) 737
AoxI GGCC 2 cut(s) 167, 420
ApeKI GCWGC 2 cut(s) 268, 506
ApoI RAATTY 3 cut(s) 518, 644, 680
AsiGI ACCGGT 1 cut(s) 325
AspLEI GCGC 1 cut(s) 349
AsuC2I CCSGG 1 cut(s) 281
AsuHPI GGTGA 2 cut(s) 55, 78
AvaI CYCGRG 1 cut(s) 737
BalI TGGCCA 1 cut(s) 169
BanI GGYRCC 1 cut(s) 382
BanII GRGCYC 2 cut(s) 260, 418
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 2 cut(s) 255, 518
BciT130I CCWGG 3 cut(s) 419, 424, 691
BciVI GTATCC 1 cut(s) 574
BclI TGATCA 1 cut(s) 124
BcnI CCSGG 1 cut(s) 281
BcoDI GTCTC 2 cut(s) 334, 552
BfmI CTRYAG 2 cut(s) 269, 619
BfuI GTATCC 1 cut(s) 574
BisI GCNGC 2 cut(s) 269, 507
BlsI GCNGC 2 cut(s) 270, 508
Bme1390I CCNGG 4 cut(s) 281, 419, 424, 691
BmeT110I CYCGRG 1 cut(s) 737
BmgBI CACGTC 1 cut(s) 601
BmiI GGNNCC 1 cut(s) 384
BmrFI CCNGG 4 cut(s) 281, 419, 424, 691
BplI GAGNNNNNCTC 2 cut(s) 184, 216
BpuMI CCSGG 1 cut(s) 281
Bsa29I ATCGAT 1 cut(s) 297
BsaI GGTCTC 1 cut(s) 334
BsaJI CCNNGG 3 cut(s) 417, 586, 690
BsaWI WCCGGW 2 cut(s) 301, 325
BsaXI ACNNNNNCTCC 2 cut(s) 707, 737
Bsc4I CCNNNNNNNGG 3 cut(s) 423, 429, 572
Bse118I RCCGGY 1 cut(s) 325
Bse3DI GCAATG 1 cut(s) 342
BseBI CCWGG 3 cut(s) 419, 424, 691
BseCI ATCGAT 1 cut(s) 297
BseDI CCNNGG 3 cut(s) 417, 586, 690
BseGI GGATG 1 cut(s) 148
BseLI CCNNNNNNNGG 3 cut(s) 423, 429, 572
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 4 cut(s) 93, 182, 198, 424
BseXI GCAGC 2 cut(s) 255, 518
BshFI GGCC 2 cut(s) 169, 422
BshNI GGYRCC 1 cut(s) 382
BshTI ACCGGT 1 cut(s) 325
BshVI ATCGAT 1 cut(s) 297
BsiHKAI GWGCWC 1 cut(s) 675
BsiHKCI CYCGRG 1 cut(s) 737
BsiSI CCGG 3 cut(s) 281, 302, 326
BslFI GGGAC 1 cut(s) 322
BslI CCNNNNNNNGG 3 cut(s) 423, 429, 572
BsmAI GTCTC 2 cut(s) 334, 552
BsmFI GGGAC 1 cut(s) 322
BsmI GAATGC 1 cut(s) 508
BsnI GGCC 2 cut(s) 169, 422
Bso31I GGTCTC 1 cut(s) 334
BsoBI CYCGRG 1 cut(s) 737
Bsp1286I GDGCHC 3 cut(s) 260, 418, 675
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 3 cut(s) 124, 294, 298
BspACI CCGC 2 cut(s) 89, 140
BspANI GGCC 2 cut(s) 169, 422
BspCNI CTCAG 4 cut(s) 92, 183, 199, 423
BspDI ATCGAT 1 cut(s) 297
BspLI GGNNCC 1 cut(s) 384
BspMAI CTGCAG 1 cut(s) 273
BspPI GGATC 1 cut(s) 293
BspT107I GGYRCC 1 cut(s) 382
BspTNI GGTCTC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 342
BsrFI RCCGGY 1 cut(s) 325
BsrGI TGTACA 1 cut(s) 3
BssAI RCCGGY 1 cut(s) 325
BssECI CCNNGG 3 cut(s) 417, 586, 690
BssMI GATC 3 cut(s) 124, 294, 298
Bst2UI CCWGG 3 cut(s) 419, 424, 691
Bst4CI ACNGT 1 cut(s) 264
Bst6I CTCTTC 1 cut(s) 10
BstAUI TGTACA 1 cut(s) 3
BstDEI CTNAG 5 cut(s) 79, 103, 191, 207, 410
BstF5I GGATG 1 cut(s) 148
BstHHI GCGC 1 cut(s) 349
BstKTI GATC 3 cut(s) 127, 297, 301
BstMAI GTCTC 2 cut(s) 334, 552
BstMBI GATC 3 cut(s) 124, 294, 298
BstMWI GCNNNNNNNGC 1 cut(s) 739
BstNI CCWGG 3 cut(s) 419, 424, 691
BstSCI CCNGG 4 cut(s) 279, 417, 422, 689
BstSFI CTRYAG 2 cut(s) 269, 619
BstV1I GCAGC 2 cut(s) 255, 518
Bsu15I ATCGAT 1 cut(s) 297
BsuI GTATCC 1 cut(s) 574
BsuRI GGCC 2 cut(s) 169, 422
BsuTUI ATCGAT 1 cut(s) 297
BtrI CACGTC 1 cut(s) 601
BtsCI GGATG 1 cut(s) 148
BtsIMutI CAGTG 1 cut(s) 260
CaiI CAGNNNCTG 1 cut(s) 429
CfoI GCGC 1 cut(s) 349
Cfr10I RCCGGY 1 cut(s) 325
ClaI ATCGAT 1 cut(s) 297
CseI GACGC 1 cut(s) 613
Csp6I GTAC 4 cut(s) 4, 38, 229, 355
CspAI ACCGGT 1 cut(s) 325
CviAII CATG 4 cut(s) 35, 224, 706, 766
CviQI GTAC 4 cut(s) 4, 38, 229, 355
DdeI CTNAG 5 cut(s) 79, 103, 191, 207, 410
DpnI GATC 3 cut(s) 126, 296, 300
DpnII GATC 3 cut(s) 124, 294, 298
EaeI YGGCCR 1 cut(s) 167
Eam1104I CTCTTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 10
EciI GGCGGA 1 cut(s) 155
Eco24I GRGCYC 2 cut(s) 260, 418
Eco31I GGTCTC 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 335
Eco88I CYCGRG 1 cut(s) 737
EcoRII CCWGG 3 cut(s) 417, 422, 689
EcoT38I GRGCYC 2 cut(s) 260, 418
FaeI CATG 4 cut(s) 38, 227, 709, 769
FaiI YATR 8 cut(s) 36, 225, 378, 616, 621, 639, 707, 767
FalI AAGNNNNNCTT 2 cut(s) 554, 586
FaqI GGGAC 1 cut(s) 322
FatI CATG 4 cut(s) 34, 223, 705, 765
FbaI TGATCA 1 cut(s) 124
FblI GTMKAC 2 cut(s) 444, 753
Fnu4HI GCNGC 2 cut(s) 269, 507
FokI GGATG 1 cut(s) 155
FriOI GRGCYC 2 cut(s) 260, 418
Fsp4HI GCNGC 2 cut(s) 269, 507
GlaI GCGC 1 cut(s) 348
GluI GCNGC 2 cut(s) 269, 507
HaeIII GGCC 2 cut(s) 169, 422
HapII CCGG 3 cut(s) 281, 302, 326
HgaI GACGC 1 cut(s) 613
HhaI GCGC 1 cut(s) 349
Hin1II CATG 4 cut(s) 38, 227, 709, 769
Hin6I GCGC 1 cut(s) 347
HinP1I GCGC 1 cut(s) 347
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HindIII AAGCTT 2 cut(s) 473, 782
HinfI GANTC 5 cut(s) 83, 335, 373, 401, 591
HpaII CCGG 3 cut(s) 281, 302, 326
HphI GGTGA 2 cut(s) 55, 78
Hpy166II GTNNAC 4 cut(s) 286, 445, 598, 754
Hpy188I TCNGA 6 cut(s) 82, 124, 334, 400, 413, 590
Hpy188III TCNNGA 2 cut(s) 524, 737
Hpy8I GTNNAC 4 cut(s) 286, 445, 598, 754
Hpy99I CGWCG 1 cut(s) 446
HpyAV CCTTC 3 cut(s) 141, 205, 706
HpyCH4III ACNGT 1 cut(s) 264
HpyCH4IV ACGT 1 cut(s) 600
HpyCH4V TGCA 5 cut(s) 223, 271, 506, 531, 705
HpyF10VI GCNNNNNNNGC 1 cut(s) 739
HpyF3I CTNAG 5 cut(s) 79, 103, 191, 207, 410
HpySE526I ACGT 1 cut(s) 600
Hsp92II CATG 4 cut(s) 38, 227, 709, 769
HspAI GCGC 1 cut(s) 347
Ksp22I TGATCA 1 cut(s) 124
Kzo9I GATC 3 cut(s) 124, 294, 298
Lsp1109I GCAGC 2 cut(s) 255, 518
MaeII ACGT 1 cut(s) 600
MaeIII GTNAC 3 cut(s) 84, 97, 601
MalI GATC 3 cut(s) 126, 296, 300
MboI GATC 3 cut(s) 124, 294, 298
MboII GAAGA 5 cut(s) 27, 52, 304, 463, 506
MhlI GDGCHC 3 cut(s) 260, 418, 675
MlsI TGGCCA 1 cut(s) 169
MluCI AATT 4 cut(s) 518, 644, 680, 789
MluNI TGGCCA 1 cut(s) 169
MlyI GAGTC 3 cut(s) 92, 344, 395
MmeI TCCRAC 1 cut(s) 138
Mox20I TGGCCA 1 cut(s) 169
MscI TGGCCA 1 cut(s) 169
MseI TTAA 2 cut(s) 696, 773
MslI CAYNNNNRTG 1 cut(s) 536
Msp20I TGGCCA 1 cut(s) 169
MspI CCGG 3 cut(s) 281, 302, 326
MspR9I CCNGG 4 cut(s) 281, 419, 424, 691
Mva1269I GAATGC 1 cut(s) 508
MvaI CCWGG 3 cut(s) 419, 424, 691
MwoI GCNNNNNNNGC 1 cut(s) 739
NciI CCSGG 1 cut(s) 281
NdeII GATC 3 cut(s) 124, 294, 298
NlaIII CATG 4 cut(s) 38, 227, 709, 769
NlaIV GGNNCC 1 cut(s) 384
NmuCI GTSAC 2 cut(s) 84, 601
PctI GAATGC 1 cut(s) 508
PfeI GAWTC 2 cut(s) 373, 591
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 1 cut(s) 429
PinAI ACCGGT 1 cut(s) 325
PkrI GCNGC 2 cut(s) 270, 508
PleI GAGTC 3 cut(s) 91, 343, 395
PpsI GAGTC 3 cut(s) 91, 343, 395
Psp6I CCWGG 3 cut(s) 417, 422, 689
PspGI CCWGG 3 cut(s) 417, 422, 689
PspN4I GGNNCC 1 cut(s) 384
PstI CTGCAG 1 cut(s) 273
PstNI CAGNNNCTG 1 cut(s) 429
PsyI GACNNNGTC 1 cut(s) 440
RsaI GTAC 4 cut(s) 5, 39, 230, 356
RsaNI GTAC 4 cut(s) 4, 38, 229, 355
RseI CAYNNNNRTG 1 cut(s) 536
SalI GTCGAC 1 cut(s) 443
SaqAI TTAA 2 cut(s) 696, 773
SatI GCNGC 2 cut(s) 269, 507
Sau3AI GATC 3 cut(s) 124, 294, 298
SchI GAGTC 3 cut(s) 92, 344, 395
ScrFI CCNGG 4 cut(s) 281, 419, 424, 691
SduI GDGCHC 3 cut(s) 260, 418, 675
SfcI CTRYAG 2 cut(s) 269, 619
SmiMI CAYNNNNRTG 1 cut(s) 536
Sse9I AATT 4 cut(s) 518, 644, 680, 789
SsiI CCGC 2 cut(s) 89, 140
StyD4I CCNGG 4 cut(s) 279, 417, 422, 689
TaaI ACNGT 1 cut(s) 264
TaiI ACGT 1 cut(s) 603
TaqI TCGA 4 cut(s) 248, 297, 444, 525
TasI AATT 4 cut(s) 518, 644, 680, 789
TatI WGTACW 4 cut(s) 3, 37, 228, 354
TfiI GAWTC 2 cut(s) 373, 591
Tru1I TTAA 2 cut(s) 696, 773
Tru9I TTAA 2 cut(s) 696, 773
TscAI CASTG 1 cut(s) 267
TseFI GTSAC 2 cut(s) 84, 601
TseI GCWGC 2 cut(s) 268, 506
Tsp45I GTSAC 2 cut(s) 84, 601
TspDTI ATGAA 2 cut(s) 290, 603
TspRI CASTG 1 cut(s) 267
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 1 cut(s) 429
XapI RAATTY 3 cut(s) 518, 644, 680
XmiI GTMKAC 2 cut(s) 444, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.