Rmu_sc0001526.1_g000022

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001526.1
Physical Location & Seq
Forward (+)
81083 .. 81469
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001526.1_g000022.1.cds

Sequence Viewer

Length: 387 bp
atggatcatgaagttgtgcttcttgggttctggactattccttatgtcatgagagtgaaaattgctctggaggagaagggagtccactacaagtatttggaagaagatcttttccataataagagccccttgcttctgagaaagaaccctgtgcataagaaagttccagttttcatccataatgataagctcatatgtgaatccctcaacatccttgaatacatagatcatgtttggaatgacaaagcagctggaaagttactttctgaggatccttatcacagagctacagctagattttgggttgattttttcgacaagaaggtacatgtgtatgtcgattgtttcattggaaatctttttctttctttctttggtatggaatga

Protein Analysis

128

Amino Acids

15.22

Weight (kDa)

6.44

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 12, 266, 279
AfaI GTAC 1 cut(s) 327
AflIII ACRYGT 1 cut(s) 328
AgsI TTSAA 1 cut(s) 218
AluBI AGCT 4 cut(s) 190, 251, 287, 293
AluI AGCT 4 cut(s) 190, 251, 287, 293
AlwI GGATC 3 cut(s) 12, 266, 279
ApeKI GCWGC 1 cut(s) 248
BaeI ACNNNNGTAYC 2 cut(s) 317, 350
BamHI GGATCC 1 cut(s) 271
BanII GRGCYC 1 cut(s) 128
BbvI GCAGC 1 cut(s) 260
BfaI CTAG 1 cut(s) 294
BfmI CTRYAG 1 cut(s) 288
BglII AGATCT 1 cut(s) 106
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
BmiI GGNNCC 1 cut(s) 273
BpmI CTGGAG 1 cut(s) 89
BsaBI GATNNNNATC 1 cut(s) 276
Bse1I ACTGG 1 cut(s) 167
Bse8I GATNNNNATC 1 cut(s) 276
BseGI GGATG 2 cut(s) 174, 210
BseJI GATNNNNATC 1 cut(s) 276
BseMII CTCAG 2 cut(s) 128, 258
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 1 cut(s) 260
Bsp1286I GDGCHC 1 cut(s) 128
Bsp143I GATC 4 cut(s) 4, 106, 226, 271
BspCNI CTCAG 2 cut(s) 129, 259
BspHI TCATGA 2 cut(s) 7, 48
BspLI GGNNCC 1 cut(s) 273
BspPI GGATC 3 cut(s) 12, 266, 279
BsrI ACTGG 1 cut(s) 167
BssMI GATC 4 cut(s) 4, 106, 226, 271
BstDEI CTNAG 2 cut(s) 137, 267
BstF5I GGATG 2 cut(s) 174, 210
BstKTI GATC 4 cut(s) 7, 109, 229, 274
BstMBI GATC 4 cut(s) 4, 106, 226, 271
BstNSI RCATGY 1 cut(s) 332
BstSFI CTRYAG 1 cut(s) 288
BstV1I GCAGC 1 cut(s) 260
BstX2I RGATCY 2 cut(s) 106, 271
BstYI RGATCY 2 cut(s) 106, 271
BtsCI GGATG 2 cut(s) 174, 210
CciI TCATGA 2 cut(s) 7, 48
Csp6I GTAC 1 cut(s) 326
CviAII CATG 4 cut(s) 8, 49, 230, 329
CviJI RGCY 5 cut(s) 126, 190, 251, 287, 293
CviKI_1 RGCY 5 cut(s) 126, 190, 251, 287, 293
CviQI GTAC 1 cut(s) 326
DdeI CTNAG 2 cut(s) 137, 267
DpnI GATC 4 cut(s) 6, 108, 228, 273
DpnII GATC 4 cut(s) 4, 106, 226, 271
Eco24I GRGCYC 1 cut(s) 128
EcoT38I GRGCYC 1 cut(s) 128
FaeI CATG 4 cut(s) 11, 52, 233, 332
FalI AAGNNNNNCTT 5 cut(s) 35, 93, 125, 113, 145
FatI CATG 4 cut(s) 7, 48, 229, 328
FauNDI CATATG 1 cut(s) 194
Fnu4HI GCNGC 1 cut(s) 249
FokI GGATG 2 cut(s) 161, 197
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 1 cut(s) 294
GluI GCNGC 1 cut(s) 249
GsuI CTGGAG 1 cut(s) 89
Hin1II CATG 4 cut(s) 11, 52, 233, 332
HinfI GANTC 2 cut(s) 81, 200
Hpy166II GTNNAC 1 cut(s) 85
Hpy188I TCNGA 2 cut(s) 138, 268
Hpy188III TCNNGA 4 cut(s) 8, 31, 49, 68
Hpy8I GTNNAC 1 cut(s) 85
HpyAV CCTTC 2 cut(s) 70, 316
HpyCH4V TGCA 1 cut(s) 154
HpyF3I CTNAG 2 cut(s) 137, 267
Hsp92II CATG 4 cut(s) 11, 52, 233, 332
Kzo9I GATC 4 cut(s) 4, 106, 226, 271
LpnPI CCDG 5 cut(s) 16, 53, 162, 180, 237
Lsp1109I GCAGC 1 cut(s) 260
MaeI CTAG 1 cut(s) 294
MaeIII GTNAC 1 cut(s) 258
MalI GATC 4 cut(s) 6, 108, 228, 273
MboI GATC 4 cut(s) 4, 106, 226, 271
MboII GAAGA 2 cut(s) 113, 116
MflI RGATCY 2 cut(s) 106, 271
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 1 cut(s) 60
MlyI GAGTC 1 cut(s) 90
MnlI CCTC 3 cut(s) 64, 215, 262
MslI CAYNNNNRTG 2 cut(s) 53, 333
MspA1I CMGCKG 1 cut(s) 251
NdeI CATATG 1 cut(s) 194
NdeII GATC 4 cut(s) 4, 106, 226, 271
NlaIII CATG 4 cut(s) 11, 52, 233, 332
NlaIV GGNNCC 1 cut(s) 273
NspI RCATGY 1 cut(s) 332
PagI TCATGA 2 cut(s) 7, 48
PciI ACATGT 1 cut(s) 328
PfeI GAWTC 1 cut(s) 200
PkrI GCNGC 1 cut(s) 250
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
PscI ACATGT 1 cut(s) 328
PspN4I GGNNCC 1 cut(s) 273
PsuI RGATCY 2 cut(s) 106, 271
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 1 cut(s) 327
RsaNI GTAC 1 cut(s) 326
RseI CAYNNNNRTG 2 cut(s) 53, 333
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 4 cut(s) 4, 106, 226, 271
SchI GAGTC 1 cut(s) 90
SduI GDGCHC 1 cut(s) 128
SetI ASST 5 cut(s) 192, 253, 289, 295, 327
SfcI CTRYAG 1 cut(s) 288
SmiMI CAYNNNNRTG 2 cut(s) 53, 333
Sse9I AATT 1 cut(s) 60
SspMI CTAG 1 cut(s) 294
TaqI TCGA 2 cut(s) 315, 339
TasI AATT 1 cut(s) 60
TfiI GAWTC 1 cut(s) 200
TseI GCWGC 1 cut(s) 248
TspDTI ATGAA 3 cut(s) 24, 163, 337
XceI RCATGY 1 cut(s) 332
XspI CTAG 1 cut(s) 294
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.