Prupe.4G146500_v2.0.a1

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
8402072 .. 8403608
1537 bp
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UTR
Exon/CDS
Intron
Prupe.4G146500.1

Sequence Viewer

Length: 330 bp
ATGGAGCTGTGGAGGGTGGTGATGTGTGTCAGTGGTCGGGGACCCGTCCCCGTGGGAATTTCTGTCATCCCTAGTTTTGATAAACTGAATAGTCATGGGGGAGCTGGAAGCCCTATAAGCTTCGCAGAAACAGTGTTTTTTTTTTTTTTTTGGGCTTGGTTCTATGAATTTGAGACCTGTGGAAACTTCAGCATAGAGGCAGAGAGTCCCAAGCTGATTGCATGGGCCAAGAGGTGCATGCAGAAGGACAGTGTGTGCAAAACACTTCCTGACCATAAAAAGGTGTATGAGTCTGTTATTGGCATGAAGAAGATGTTTGGTATGGAGTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.36

Weight (kDa)

7.66

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 57, 167
AcuI CTGAAG 1 cut(s) 172
AfiI CCNNNNNNNGG 1 cut(s) 280
AluBI AGCT 4 cut(s) 7, 104, 120, 214
AluI AGCT 4 cut(s) 7, 104, 120, 214
Alw26I GTCTC 1 cut(s) 167
AoxI GGCC 1 cut(s) 225
ApoI RAATTY 2 cut(s) 57, 167
AspS9I GGNCC 2 cut(s) 41, 225
AsuHPI GGTGA 1 cut(s) 31
AvaII GGWCC 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 167
BfaI CTAG 1 cut(s) 72
Bme18I GGWCC 1 cut(s) 41
BmgT120I GGNCC 2 cut(s) 41, 225
BmiI GGNNCC 2 cut(s) 42, 43
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 1 cut(s) 51
Bsc4I CCNNNNNNNGG 1 cut(s) 280
BseDI CCNNGG 1 cut(s) 51
BseGI GGATG 1 cut(s) 66
BseLI CCNNNNNNNGG 1 cut(s) 280
BshFI GGCC 1 cut(s) 227
BslFI GGGAC 3 cut(s) 32, 54, 192
BslI CCNNNNNNNGG 1 cut(s) 280
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 3 cut(s) 32, 54, 192
BsnI GGCC 1 cut(s) 227
Bso31I GGTCTC 1 cut(s) 167
BspANI GGCC 1 cut(s) 227
BspLI GGNNCC 2 cut(s) 42, 43
BspTNI GGTCTC 1 cut(s) 167
BssECI CCNNGG 1 cut(s) 51
Bst4CI ACNGT 2 cut(s) 133, 251
BstC8I GCNNGC 1 cut(s) 239
BstDSI CCRYGG 1 cut(s) 51
BstF5I GGATG 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 167
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstNSI RCATGY 1 cut(s) 241
BsuRI GGCC 1 cut(s) 227
BtgI CCRYGG 1 cut(s) 51
BtsCI GGATG 1 cut(s) 66
BtsIMutI CAGTG 3 cut(s) 37, 138, 256
Cac8I GCNNGC 1 cut(s) 239
Cfr13I GGNCC 2 cut(s) 41, 225
CviAII CATG 4 cut(s) 95, 222, 238, 304
CviJI RGCY 7 cut(s) 7, 104, 111, 120, 155, 214, 227
CviKI_1 RGCY 7 cut(s) 7, 104, 111, 120, 155, 214, 227
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 172
EcoO109I RGGNCCY 1 cut(s) 41
FaeI CATG 4 cut(s) 98, 225, 241, 307
FaqI GGGAC 3 cut(s) 32, 54, 192
FatI CATG 4 cut(s) 94, 221, 237, 303
FokI GGATG 1 cut(s) 53
FspBI CTAG 1 cut(s) 72
HaeIII GGCC 1 cut(s) 227
Hin1II CATG 4 cut(s) 98, 225, 241, 307
HindIII AAGCTT 1 cut(s) 118
HinfI GANTC 2 cut(s) 205, 290
HphI GGTGA 1 cut(s) 31
Hpy188III TCNNGA 1 cut(s) 269
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 2 cut(s) 133, 251
HpyCH4V TGCA 4 cut(s) 221, 237, 241, 258
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
Hsp92II CATG 4 cut(s) 98, 225, 241, 307
KflI GGGWCCC 1 cut(s) 41
LmnI GCTCC 2 cut(s) 4, 101
LpnPI CCDG 3 cut(s) 90, 190, 282
MaeI CTAG 1 cut(s) 72
MboII GAAGA 2 cut(s) 319, 322
MluCI AATT 2 cut(s) 57, 167
MlyI GAGTC 2 cut(s) 214, 299
MnlI CCTC 3 cut(s) 6, 190, 225
MwoI GCNNNNNNNGC 1 cut(s) 117
NlaIII CATG 4 cut(s) 98, 225, 241, 307
NlaIV GGNNCC 2 cut(s) 42, 43
NspI RCATGY 1 cut(s) 241
PaeI GCATGC 1 cut(s) 241
PleI GAGTC 2 cut(s) 213, 298
PpsI GAGTC 2 cut(s) 213, 298
PpuMI RGGWCCY 1 cut(s) 41
Psp5II RGGWCCY 1 cut(s) 41
PspN4I GGNNCC 2 cut(s) 42, 43
PspPI GGNCC 2 cut(s) 41, 225
PspPPI RGGWCCY 1 cut(s) 41
Sau96I GGNCC 2 cut(s) 41, 225
SchI GAGTC 2 cut(s) 214, 299
SetI ASST 7 cut(s) 9, 106, 122, 179, 216, 236, 285
SinI GGWCC 1 cut(s) 41
SphI GCATGC 1 cut(s) 241
Sse9I AATT 2 cut(s) 57, 167
SspMI CTAG 1 cut(s) 72
TaaI ACNGT 2 cut(s) 133, 251
TasI AATT 2 cut(s) 57, 167
TscAI CASTG 3 cut(s) 37, 138, 256
TspDTI ATGAA 2 cut(s) 180, 320
TspRI CASTG 3 cut(s) 37, 138, 256
VpaK11BI GGWCC 1 cut(s) 41
XapI RAATTY 2 cut(s) 57, 167
XceI RCATGY 1 cut(s) 241
XspI CTAG 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.