Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000304

Physical Location & Seq

Genomic Coordinates Reverse (-)

8444501 .. 8445404

Gene Structure 904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G147800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 663 bp

ATGGCAGACGAAGTGGTTTTATTGGATTTCTGGCCAAGCCCATTTGGGATGAGAGTGAGGATCGCCTTGGCGGAGAAGGGCATCGACTATGAACCCAGGGAAGAAGATTTGAGCAACAAGAGCCCTCTGCTTCTCAAGATGAACCCGGTTCACAAGCAAATCCCAGTCTTGATCCACAAGGGAAGACCCGTATGCGAATCCCTCATCATTGTTCAATACATTGATGAGGTTTGGAGTCACCAAGCTCCTCTGTTGCCTTCTGATCCTTATCATAGAGCCCATGCCAGGTTCTGGGCTGATTATGTTGACAAGAAGATTTATTCTACAGGAAAGTTGGTGTGGGGAACAAGAGGTGAAATCCAAGAAGCAGCAAAGAAGGAACTGATAGAGTGCTTCAAGCTGTTGGAAAATGAGTTGGGAGACAAGACCTACTTTGGAGGTGAGAGCTTTGGCATAGTTGACGTGGCACTTATCCCTTTCTATAGCTGGTTCTATGCGCTAGAGACCTGTGGAAACCTGTGCATGGTGAAGGAGTGTCCAAGGCTTGTGACTTGGGCTAAGAGGTGCATGCAGAGGGAGAGTGTGTCCAAGTCTCTGCCTGATCAGTACAAAATGTATGACTTCCTTTTGGAGCTTAGGAAAAAGTTTGAGATTCATAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004364 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006518 GO:0006575 GO:0006749 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009404 GO:0009407 GO:0009636 GO:0009987 GO:0016740 GO:0016765 GO:0019748 GO:0034641 GO:0042221 GO:0043603 GO:0044237 GO:0044248 GO:0044424 GO:0044464 GO:0050896 GO:0051186 GO:0071704 GO:0098754 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418

Pfam Domains

Protein Families

GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

221

Amino Acids

25.61

Weight (kDa)

6.32

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000304)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca	FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica	MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica	Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis	pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis	RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata	RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora	Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii	Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa	Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha	Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana	Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	291
AciI	CCGC	1 cut(s)	71
AclWI	GGATC	3 cut(s)	68, 166, 257
AcoI	YGGCCR	1 cut(s)	32
AfaI	GTAC	1 cut(s)	608
AfiI	CCNNNNNNNGG	3 cut(s)	285, 291, 523
AgsI	TTSAA	2 cut(s)	215, 397
AjiI	CACGTC	1 cut(s)	463
AjnI	CCWGG	2 cut(s)	95, 284
AluBI	AGCT	6 cut(s)	245, 400, 447, 486, 634, 660
AluI	AGCT	6 cut(s)	245, 400, 447, 486, 634, 660
Alw26I	GTCTC	3 cut(s)	414, 497, 597
AlwI	GGATC	3 cut(s)	68, 166, 257
AlwNI	CAGNNNCTG	1 cut(s)	291
AoxI	GGCC	1 cut(s)	32
ApeKI	GCWGC	1 cut(s)	368
AspLEI	GCGC	1 cut(s)	499
AsuC2I	CCSGG	1 cut(s)	146
AsuHPI	GGTGA	4 cut(s)	230, 365, 452, 538
BalI	TGGCCA	1 cut(s)	34
BanII	GRGCYC	2 cut(s)	125, 280
BbsI	GAAGAC	1 cut(s)	190
BbvI	GCAGC	1 cut(s)	380
BciT130I	CCWGG	2 cut(s)	97, 286
BclI	TGATCA	1 cut(s)	601
BcnI	CCSGG	1 cut(s)	146
BcoDI	GTCTC	3 cut(s)	414, 497, 597
BfaI	CTAG	1 cut(s)	500
BfmI	CTRYAG	2 cut(s)	324, 481
BisI	GCNGC	1 cut(s)	369
BlsI	GCNGC	1 cut(s)	370
Bme1390I	CCNGG	3 cut(s)	97, 146, 286
BmgBI	CACGTC	1 cut(s)	463
BmrFI	CCNGG	3 cut(s)	97, 146, 286
BmrI	ACTGGG	1 cut(s)	158
BmsI	GCATC	1 cut(s)	90
BmuI	ACTGGG	1 cut(s)	158
BpiI	GAAGAC	1 cut(s)	190
Bpu10I	CCTNAGC	1 cut(s)	635
BpuEI	CTTGAG	1 cut(s)	119
BpuMI	CCSGG	1 cut(s)	146
BsaBI	GATNNNNATC	1 cut(s)	267
BsaI	GGTCTC	1 cut(s)	497
BsaJI	CCNNGG	4 cut(s)	66, 95, 96, 539
BsaXI	ACNNNNNCTCC	2 cut(s)	569, 599
Bsc4I	CCNNNNNNNGG	3 cut(s)	285, 291, 523
Bse1I	ACTGG	1 cut(s)	164
Bse8I	GATNNNNATC	1 cut(s)	267
BseBI	CCWGG	2 cut(s)	97, 286
BseDI	CCNNGG	4 cut(s)	66, 95, 96, 539
BseGI	GGATG	1 cut(s)	54
BseJI	GATNNNNATC	1 cut(s)	267
BseLI	CCNNNNNNNGG	3 cut(s)	285, 291, 523
BseNI	ACTGG	1 cut(s)	164
BseRI	GAGGAG	1 cut(s)	237
BseXI	GCAGC	1 cut(s)	380
BshFI	GGCC	1 cut(s)	34
BsiSI	CCGG	1 cut(s)	146
BslI	CCNNNNNNNGG	3 cut(s)	285, 291, 523
BsmAI	GTCTC	3 cut(s)	414, 497, 597
BsnI	GGCC	1 cut(s)	34
Bso31I	GGTCTC	1 cut(s)	497
Bsp1286I	GDGCHC	2 cut(s)	125, 280
Bsp143I	GATC	4 cut(s)	60, 171, 262, 601
BspACI	CCGC	1 cut(s)	71
BspANI	GGCC	1 cut(s)	34
BspPI	GGATC	3 cut(s)	68, 166, 257
BspTNI	GGTCTC	1 cut(s)	497
BsrI	ACTGG	1 cut(s)	164
BssECI	CCNNGG	4 cut(s)	66, 95, 96, 539
BssMI	GATC	4 cut(s)	60, 171, 262, 601
BssT1I	CCWWGG	2 cut(s)	66, 539
Bst2UI	CCWGG	2 cut(s)	97, 286
BstC8I	GCNNGC	1 cut(s)	569
BstDEI	CTNAG	2 cut(s)	558, 635
BstF5I	GGATG	1 cut(s)	54
BstHHI	GCGC	1 cut(s)	499
BstKTI	GATC	4 cut(s)	63, 174, 265, 604
BstMAI	GTCTC	3 cut(s)	414, 497, 597
BstMBI	GATC	4 cut(s)	60, 171, 262, 601
BstMWI	GCNNNNNNNGC	1 cut(s)	120
BstNI	CCWGG	2 cut(s)	97, 286
BstNSI	RCATGY	1 cut(s)	571
BstSCI	CCNGG	3 cut(s)	95, 144, 284
BstSFI	CTRYAG	2 cut(s)	324, 481
BstV1I	GCAGC	1 cut(s)	380
BstV2I	GAAGAC	1 cut(s)	190
BsuRI	GGCC	1 cut(s)	34
BtrI	CACGTC	1 cut(s)	463
BtsCI	GGATG	1 cut(s)	54
Cac8I	GCNNGC	1 cut(s)	569
CaiI	CAGNNNCTG	1 cut(s)	291
CfoI	GCGC	1 cut(s)	499
Csp6I	GTAC	1 cut(s)	607
CviAII	CATG	3 cut(s)	281, 523, 568
CviQI	GTAC	1 cut(s)	607
DdeI	CTNAG	2 cut(s)	558, 635
DpnI	GATC	4 cut(s)	62, 173, 264, 603
DpnII	GATC	4 cut(s)	60, 171, 262, 601
EaeI	YGGCCR	1 cut(s)	32
EciI	GGCGGA	1 cut(s)	86
Eco130I	CCWWGG	2 cut(s)	66, 539
Eco24I	GRGCYC	2 cut(s)	125, 280
Eco31I	GGTCTC	1 cut(s)	497
EcoRII	CCWGG	2 cut(s)	95, 284
EcoT14I	CCWWGG	2 cut(s)	66, 539
EcoT38I	GRGCYC	2 cut(s)	125, 280
ErhI	CCWWGG	2 cut(s)	66, 539
FaeI	CATG	3 cut(s)	284, 526, 571
FalI	AAGNNNNNCTT	2 cut(s)	416, 448
FatI	CATG	3 cut(s)	280, 522, 567
FbaI	TGATCA	1 cut(s)	601
Fnu4HI	GCNGC	1 cut(s)	369
FokI	GGATG	1 cut(s)	61
FriOI	GRGCYC	2 cut(s)	125, 280
Fsp4HI	GCNGC	1 cut(s)	369
FspBI	CTAG	1 cut(s)	500
GlaI	GCGC	1 cut(s)	498
GluI	GCNGC	1 cut(s)	369
HaeIII	GGCC	1 cut(s)	34
HapII	CCGG	1 cut(s)	146
HhaI	GCGC	1 cut(s)	499
Hin1II	CATG	3 cut(s)	284, 526, 571
Hin6I	GCGC	1 cut(s)	497
HinP1I	GCGC	1 cut(s)	497
HincII	GTYRAC	2 cut(s)	307, 460
HindII	GTYRAC	2 cut(s)	307, 460
HinfI	GANTC	3 cut(s)	197, 235, 652
HpaII	CCGG	1 cut(s)	146
HphI	GGTGA	4 cut(s)	230, 365, 452, 538
Hpy166II	GTNNAC	3 cut(s)	151, 307, 460
Hpy188I	TCNGA	1 cut(s)	262
Hpy188III	TCNNGA	2 cut(s)	136, 169
Hpy8I	GTNNAC	3 cut(s)	151, 307, 460
HpyAV	CCTTC	4 cut(s)	70, 267, 370, 523
HpyCH4IV	ACGT	1 cut(s)	462
HpyCH4V	TGCA	3 cut(s)	522, 567, 571
HpyF10VI	GCNNNNNNNGC	1 cut(s)	120
HpyF3I	CTNAG	2 cut(s)	558, 635
HpySE526I	ACGT	1 cut(s)	462
Hsp92II	CATG	3 cut(s)	284, 526, 571
HspAI	GCGC	1 cut(s)	497
Ksp22I	TGATCA	1 cut(s)	601
Kzo9I	GATC	4 cut(s)	60, 171, 262, 601
LmnI	GCTCC	2 cut(s)	250, 631
Lsp1109I	GCAGC	1 cut(s)	380
LweI	GCATC	1 cut(s)	90
MaeI	CTAG	1 cut(s)	500
MaeII	ACGT	1 cut(s)	462
MaeIII	GTNAC	2 cut(s)	236, 547
MalI	GATC	4 cut(s)	62, 173, 264, 603
MboI	GATC	4 cut(s)	60, 171, 262, 601
MboII	GAAGA	4 cut(s)	113, 116, 195, 325
MhlI	GDGCHC	2 cut(s)	125, 280
MlsI	TGGCCA	1 cut(s)	34
MluNI	TGGCCA	1 cut(s)	34
MlyI	GAGTC	1 cut(s)	244
MmeI	TCCRAC	1 cut(s)	384
MnlI	CCTC	9 cut(s)	51, 135, 212, 220, 258, 344, 431, 555, 567
Mox20I	TGGCCA	1 cut(s)	34
MscI	TGGCCA	1 cut(s)	34
Msp20I	TGGCCA	1 cut(s)	34
MspI	CCGG	1 cut(s)	146
MspR9I	CCNGG	3 cut(s)	97, 146, 286
MvaI	CCWGG	2 cut(s)	97, 286
MwoI	GCNNNNNNNGC	1 cut(s)	120
NciI	CCSGG	1 cut(s)	146
NdeII	GATC	4 cut(s)	60, 171, 262, 601
NlaIII	CATG	3 cut(s)	284, 526, 571
NmuCI	GTSAC	2 cut(s)	236, 547
NspI	RCATGY	1 cut(s)	571
PaeI	GCATGC	1 cut(s)	571
PasI	CCCWGGG	1 cut(s)	96
PfeI	GAWTC	2 cut(s)	197, 652
PflMI	CCANNNNNTGG	1 cut(s)	291
PkrI	GCNGC	1 cut(s)	370
PleI	GAGTC	1 cut(s)	243
PpsI	GAGTC	1 cut(s)	243
Psp6I	CCWGG	2 cut(s)	95, 284
PspGI	CCWGG	2 cut(s)	95, 284
PstNI	CAGNNNCTG	1 cut(s)	291
RsaI	GTAC	1 cut(s)	608
RsaNI	GTAC	1 cut(s)	607
SatI	GCNGC	1 cut(s)	369
Sau3AI	GATC	4 cut(s)	60, 171, 262, 601
SchI	GAGTC	1 cut(s)	244
ScrFI	CCNGG	3 cut(s)	97, 146, 286
SduI	GDGCHC	2 cut(s)	125, 280
SfaNI	GCATC	1 cut(s)	90
SfcI	CTRYAG	2 cut(s)	324, 481
SmlI	CTYRAG	1 cut(s)	134
SmoI	CTYRAG	1 cut(s)	134
SphI	GCATGC	1 cut(s)	571
SsiI	CCGC	1 cut(s)	71
SspMI	CTAG	1 cut(s)	500
StyD4I	CCNGG	3 cut(s)	95, 144, 284
StyI	CCWWGG	2 cut(s)	66, 539
TaiI	ACGT	1 cut(s)	465
TaqI	TCGA	1 cut(s)	84
TatI	WGTACW	1 cut(s)	606
TfiI	GAWTC	2 cut(s)	197, 652
TseFI	GTSAC	2 cut(s)	236, 547
TseI	GCWGC	1 cut(s)	368
Tsp45I	GTSAC	2 cut(s)	236, 547
TspDTI	ATGAA	3 cut(s)	105, 155, 644
Van91I	CCANNNNNTGG	1 cut(s)	291
XceI	RCATGY	1 cut(s)	571
XspI	CTAG	1 cut(s)	500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.