Rmu_sc0003500.1_g000022

glutathione s-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003500.1
OG0000304
Physical Location & Seq
Forward (+)
96943 .. 99868
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003500.1_g000022.1.cds

Sequence Viewer

Length: 867 bp
atggtcggaaaagttgccggaaagttgactggaaaagtcaccggcggcggccggaatagtggcctaaaagttgatcgaaaacggtcaaccggcgttgacgtggcgctgggtcatactgtaggtttccggccggttcttagggtggggctgccggttctggactcctgtgatagagttcttcaaggtgtgaggtggaggcagaaaaggcttcaagattttgtatttggattcaaggtttttagcttcttgaatcagggtttggctatttgtttcaaggttagcctcgctgcccctgcagcgcccacaagccctgcttgccttctgcccccgcgcaagctctcctttccccgcgaacgctcgccttcccccgtgaacactcgcctgccctcacacacgctcgctcgctgccctcccaaatgcttgccttccccgcaacatccccacaacaactttagggtcgaccactgccggcgaccaattttccagcaatttttcaagttatttgatgcaggcaggaagatatggtttacaaaaggagaagagctgcaggcagcaaagaaggaattcattgaaagcctgaaggtgttggaaggcgagcttggagacaagccttatttcatgggtgagagatttgggttcctggacattgctctcatcacattctacacctggtttcatgcttatgagacacttggaaacttcagtatagaggctgagtgccccaagctgatttcatgggccaagaggtgcttgcagaaggagagtgtttcaaaatctcttactgaccagaaaaaggcttatgagtatcttcttgagatgaagaagaggcttggtgtggaatggtggtataagaaagtcctgaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004364 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006790 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009266 GO:0009404 GO:0009407 GO:0009409 GO:0009414 GO:0009415 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009635 GO:0009636 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0016020 GO:0016740 GO:0016765 GO:0018973 GO:0018974 GO:0019326 GO:0019439 GO:0019748 GO:0019899 GO:0031090 GO:0031668 GO:0033218 GO:0033554 GO:0034641 GO:0042221 GO:0042277 GO:0042537 GO:0042631 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043295 GO:0043603 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046256 GO:0046260 GO:0046263 GO:0046686 GO:0048037 GO:0048046 GO:0048583 GO:0050789 GO:0050896 GO:0051186 GO:0051716 GO:0065007 GO:0070887 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071944 GO:0072341 GO:0072490 GO:0072491 GO:0080167 GO:0098588 GO:0098754 GO:0098805 GO:0104004 GO:1900750 GO:1901360 GO:1901361 GO:1901564 GO:1901575 GO:1901681 GO:1901700 GO:1901701 GO:2000030
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
GST_C GST_C_2 GST_N GST_N_3

Protein Analysis

288

Amino Acids

32.78

Weight (kDa)

9.93

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 459
AccII CGCG 2 cut(s) 331, 351
AciI CCGC 5 cut(s) 45, 48, 329, 349, 431
AcoI YGGCCR 2 cut(s) 49, 128
AcsI RAATTY 1 cut(s) 563
AcuI CTGAAG 2 cut(s) 599, 685
AfiI CCNNNNNNNGG 1 cut(s) 793
AgsI TTSAA 8 cut(s) 182, 212, 232, 250, 274, 496, 572, 771
AjiI CACGTC 1 cut(s) 100
AjnI CCWGG 2 cut(s) 639, 668
AjuI GAANNNNNNNTTGG 4 cut(s) 242, 274, 582, 614
AluBI AGCT 5 cut(s) 243, 337, 544, 598, 727
AluI AGCT 5 cut(s) 243, 337, 544, 598, 727
Alw26I GTCTC 2 cut(s) 597, 680
AoxI GGCC 4 cut(s) 49, 61, 128, 738
ApeKI GCWGC 6 cut(s) 148, 287, 296, 405, 544, 551
ApoI RAATTY 1 cut(s) 563
Asp700I GAANNNNTTC 1 cut(s) 563
AspLEI GCGC 3 cut(s) 106, 301, 333
AspS9I GGNCC 1 cut(s) 738
AsuHPI GGTGA 2 cut(s) 31, 635
BaeGI GKGCMC 1 cut(s) 722
BbvI GCAGC 6 cut(s) 135, 274, 308, 392, 531, 563
BciT130I CCWGG 2 cut(s) 641, 670
BcoDI GTCTC 2 cut(s) 597, 680
BfmI CTRYAG 3 cut(s) 117, 294, 545
BfoI RGCGCY 2 cut(s) 107, 302
BisI GCNGC 8 cut(s) 46, 49, 149, 288, 297, 406, 545, 552
BlsI GCNGC 8 cut(s) 47, 50, 150, 289, 298, 407, 546, 553
Bme1390I CCNGG 2 cut(s) 641, 670
BmgBI CACGTC 1 cut(s) 100
BmgT120I GGNCC 1 cut(s) 738
BmiI GGNNCC 1 cut(s) 638
BmrFI CCNGG 2 cut(s) 641, 670
BmsI GCATC 1 cut(s) 496
BpuEI CTTGAG 1 cut(s) 833
Bsc4I CCNNNNNNNGG 1 cut(s) 793
Bse118I RCCGGY 5 cut(s) 41, 89, 130, 151, 468
Bse1I ACTGG 1 cut(s) 34
Bse3DI GCAATG 1 cut(s) 645
BseBI CCWGG 2 cut(s) 641, 670
BseGI GGATG 1 cut(s) 436
BseLI CCNNNNNNNGG 1 cut(s) 793
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 1 cut(s) 705
BseNI ACTGG 1 cut(s) 34
BseSI GKGCMC 1 cut(s) 722
BseX3I CGGCCG 2 cut(s) 49, 128
BseXI GCAGC 6 cut(s) 135, 274, 308, 392, 531, 563
BseYI CCCAGC 1 cut(s) 106
Bsh1236I CGCG 2 cut(s) 331, 351
Bsh1285I CGRYCG 2 cut(s) 52, 131
BshFI GGCC 4 cut(s) 51, 63, 130, 740
BsiEI CGRYCG 2 cut(s) 52, 131
BsiSI CCGG 8 cut(s) 18, 42, 52, 90, 127, 131, 152, 469
BslI CCNNNNNNNGG 1 cut(s) 793
BsmAI GTCTC 2 cut(s) 597, 680
BsnI GGCC 4 cut(s) 51, 63, 130, 740
Bsp1286I GDGCHC 1 cut(s) 722
Bsp143I GATC 1 cut(s) 73
BspACI CCGC 5 cut(s) 45, 48, 329, 349, 431
BspANI GGCC 4 cut(s) 51, 63, 130, 740
BspCNI CTCAG 1 cut(s) 706
BspFNI CGCG 2 cut(s) 331, 351
BspLI GGNNCC 1 cut(s) 638
BspMAI CTGCAG 2 cut(s) 298, 549
BspQI GCTCTTC 1 cut(s) 534
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 5 cut(s) 41, 89, 130, 151, 468
BsrI ACTGG 1 cut(s) 34
BssAI RCCGGY 5 cut(s) 41, 89, 130, 151, 468
BssMI GATC 1 cut(s) 73
Bst2UI CCWGG 2 cut(s) 641, 670
Bst4CI ACNGT 2 cut(s) 84, 118
Bst6I CTCTTC 2 cut(s) 534, 818
BstDEI CTNAG 2 cut(s) 137, 714
BstF5I GGATG 1 cut(s) 436
BstFNI CGCG 2 cut(s) 331, 351
BstH2I RGCGCY 2 cut(s) 107, 302
BstHHI GCGC 3 cut(s) 106, 301, 333
BstKTI GATC 1 cut(s) 76
BstMAI GTCTC 2 cut(s) 597, 680
BstMBI GATC 1 cut(s) 73
BstMCI CGRYCG 2 cut(s) 52, 131
BstMWI GCNNNNNNNGC 5 cut(s) 205, 293, 296, 315, 430
BstNI CCWGG 2 cut(s) 641, 670
BstSCI CCNGG 2 cut(s) 639, 668
BstSFI CTRYAG 3 cut(s) 117, 294, 545
BstSLI GKGCMC 1 cut(s) 722
BstUI CGCG 2 cut(s) 331, 351
BstV1I GCAGC 6 cut(s) 135, 274, 308, 392, 531, 563
BstZI CGGCCG 2 cut(s) 49, 128
BsuRI GGCC 4 cut(s) 51, 63, 130, 740
BtrI CACGTC 1 cut(s) 100
BtsCI GGATG 1 cut(s) 436
BtsI GCAGTG 1 cut(s) 463
BtsIMutI CAGTG 1 cut(s) 463
CfoI GCGC 3 cut(s) 106, 301, 333
Cfr10I RCCGGY 5 cut(s) 41, 89, 130, 151, 468
Cfr13I GGNCC 1 cut(s) 738
CsiI ACCWGGT 1 cut(s) 668
CviAII CATG 3 cut(s) 619, 677, 735
DdeI CTNAG 2 cut(s) 137, 714
DpnI GATC 1 cut(s) 75
DpnII GATC 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 49, 128
EagI CGGCCG 2 cut(s) 49, 128
Eam1104I CTCTTC 2 cut(s) 534, 818
EarI CTCTTC 2 cut(s) 534, 818
EclXI CGGCCG 2 cut(s) 49, 128
Eco52I CGGCCG 2 cut(s) 49, 128
Eco57I CTGAAG 2 cut(s) 599, 685
EcoRI GAATTC 1 cut(s) 563
EcoRII CCWGG 2 cut(s) 639, 668
FaeI CATG 3 cut(s) 622, 680, 738
FaiI YATR 9 cut(s) 114, 523, 620, 678, 684, 707, 736, 801, 849
FalI AAGNNNNNCTT 8 cut(s) 298, 330, 326, 358, 582, 614, 734, 766
FatI CATG 3 cut(s) 618, 676, 734
FauI CCCGC 3 cut(s) 336, 356, 438
FblI GTMKAC 1 cut(s) 459
Fnu4HI GCNGC 8 cut(s) 46, 49, 149, 288, 297, 406, 545, 552
FokI GGATG 1 cut(s) 423
Fsp4HI GCNGC 8 cut(s) 46, 49, 149, 288, 297, 406, 545, 552
GlaI GCGC 3 cut(s) 105, 300, 332
GluI GCNGC 8 cut(s) 46, 49, 149, 288, 297, 406, 545, 552
GsaI CCCAGC 1 cut(s) 110
HaeII RGCGCY 2 cut(s) 107, 302
HaeIII GGCC 4 cut(s) 51, 63, 130, 740
HapII CCGG 8 cut(s) 18, 42, 52, 90, 127, 131, 152, 469
HhaI GCGC 3 cut(s) 106, 301, 333
Hin1II CATG 3 cut(s) 622, 680, 738
Hin6I GCGC 3 cut(s) 104, 299, 331
HinP1I GCGC 3 cut(s) 104, 299, 331
HincII GTYRAC 4 cut(s) 27, 87, 97, 460
HindII GTYRAC 4 cut(s) 27, 87, 97, 460
HinfI GANTC 3 cut(s) 161, 228, 250
HpaII CCGG 8 cut(s) 18, 42, 52, 90, 127, 131, 152, 469
HphI GGTGA 2 cut(s) 31, 635
Hpy166II GTNNAC 6 cut(s) 27, 87, 97, 373, 460, 528
Hpy188I TCNGA 1 cut(s) 8
Hpy188III TCNNGA 5 cut(s) 158, 212, 247, 812, 859
Hpy8I GTNNAC 6 cut(s) 27, 87, 97, 373, 460, 528
HpyAV CCTTC 7 cut(s) 329, 372, 435, 553, 574, 584, 751
HpyCH4III ACNGT 2 cut(s) 84, 118
HpyCH4IV ACGT 1 cut(s) 99
HpyCH4V TGCA 4 cut(s) 296, 509, 547, 754
HpyF10VI GCNNNNNNNGC 5 cut(s) 205, 293, 296, 315, 430
HpyF3I CTNAG 2 cut(s) 137, 714
HpySE526I ACGT 1 cut(s) 99
Hsp92II CATG 3 cut(s) 622, 680, 738
HspAI GCGC 3 cut(s) 104, 299, 331
KroI GCCGGC 1 cut(s) 468
KroNI GCCGGC 1 cut(s) 470
Kzo9I GATC 1 cut(s) 73
LguI GCTCTTC 1 cut(s) 534
Lsp1109I GCAGC 6 cut(s) 135, 274, 308, 392, 531, 563
LweI GCATC 1 cut(s) 496
MabI ACCWGGT 1 cut(s) 668
MaeII ACGT 1 cut(s) 99
MaeIII GTNAC 1 cut(s) 37
MalI GATC 1 cut(s) 75
MboI GATC 1 cut(s) 73
MboII GAAGA 6 cut(s) 170, 529, 551, 800, 832, 835
MhlI GDGCHC 1 cut(s) 722
MluCI AATT 3 cut(s) 477, 488, 563
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 567
MnlI CCTC 8 cut(s) 183, 189, 293, 397, 420, 703, 738, 819
MroNI GCCGGC 1 cut(s) 468
MroXI GAANNNNTTC 1 cut(s) 563
MslI CAYNNNNRTG 1 cut(s) 681
MspI CCGG 8 cut(s) 18, 42, 52, 90, 127, 131, 152, 469
MspR9I CCNGG 2 cut(s) 641, 670
MvaI CCWGG 2 cut(s) 641, 670
MvnI CGCG 2 cut(s) 331, 351
MwoI GCNNNNNNNGC 5 cut(s) 205, 293, 296, 315, 430
NaeI GCCGGC 1 cut(s) 470
NdeII GATC 1 cut(s) 73
NgoMIV GCCGGC 1 cut(s) 468
NlaIII CATG 3 cut(s) 622, 680, 738
NlaIV GGNNCC 1 cut(s) 638
NmuCI GTSAC 1 cut(s) 37
PciSI GCTCTTC 1 cut(s) 534
PdiI GCCGGC 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 563
PfeI GAWTC 2 cut(s) 228, 250
PfoI TCCNGGA 1 cut(s) 639
PkrI GCNGC 8 cut(s) 47, 50, 150, 289, 298, 407, 546, 553
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
Psp6I CCWGG 2 cut(s) 639, 668
PspFI CCCAGC 1 cut(s) 106
PspGI CCWGG 2 cut(s) 639, 668
PspN4I GGNNCC 1 cut(s) 638
PspPI GGNCC 1 cut(s) 738
PstI CTGCAG 2 cut(s) 298, 549
RseI CAYNNNNRTG 1 cut(s) 681
SalI GTCGAC 1 cut(s) 458
SapI GCTCTTC 1 cut(s) 534
SatI GCNGC 8 cut(s) 46, 49, 149, 288, 297, 406, 545, 552
Sau3AI GATC 1 cut(s) 73
Sau96I GGNCC 1 cut(s) 738
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 2 cut(s) 641, 670
SduI GDGCHC 1 cut(s) 722
SexAI ACCWGGT 1 cut(s) 668
SfaNI GCATC 1 cut(s) 496
SfcI CTRYAG 3 cut(s) 117, 294, 545
SgrAI CRCCGGYG 1 cut(s) 41
SmiMI CAYNNNNRTG 1 cut(s) 681
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
Sse9I AATT 3 cut(s) 477, 488, 563
SsiI CCGC 5 cut(s) 45, 48, 329, 349, 431
StyD4I CCNGG 2 cut(s) 639, 668
TaaI ACNGT 2 cut(s) 84, 118
TaiI ACGT 1 cut(s) 102
TaqI TCGA 2 cut(s) 76, 459
TasI AATT 3 cut(s) 477, 488, 563
TauI GCSGC 2 cut(s) 48, 51
TfiI GAWTC 2 cut(s) 228, 250
TscAI CASTG 1 cut(s) 470
TseFI GTSAC 1 cut(s) 37
TseI GCWGC 6 cut(s) 148, 287, 296, 405, 544, 551
Tsp45I GTSAC 1 cut(s) 37
TspDTI ATGAA 5 cut(s) 556, 607, 665, 723, 833
TspRI CASTG 1 cut(s) 470
XapI RAATTY 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 459
XmnI GAANNNNTTC 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.