Rmu_ssc0000372.1_g000062

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000372.1
Physical Location & Seq
Reverse (-)
228294 .. 232350
4057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000372.1_g000062.1.cds

Sequence Viewer

Length: 666 bp
atggatcatgaagttgtgcttcttgggttctggactattccttatgtcatgagagtgaaaattgctctggaggagaagggagtccactacaagtatttggaagaagatcttttccataataagagccccttgcttctgaaaacgaaccctgtgcataagaaagttccagttttcatccataatgataagcccatatgtgaatccctcaacatccttgaatacatagatcatgtttggaatgacaaagcagctggaaagttactttctgaggatccttatcacagagctacagctagatttttggttgattttttcgacaagaagattgtagattgtgggagaaggatgtggggtagcaaaggagcagaccaagaagcagcagcaactgaatttatagaatgtttgaaactattagaagttgagcttggggagatgccctttttcgaaggcgagcatttcggcctcttggatattgcccttataccgttctcgggcaggttttatacatacgagacatgttgcaatttcagcgtagataaagaatgccccaagataatggaatgggtgaagaggtgttatcagagggacaatgtttccactagcattccagacccatataaagtctatgacttcgttttggaagtgaagatgtatggaattagttag

Protein Analysis

221

Amino Acids

25.8

Weight (kDa)

5.52

Isoelectric Point (pI)

35.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 486
AclWI GGATC 3 cut(s) 12, 266, 279
AcsI RAATTY 1 cut(s) 389
AfiI CCNNNNNNNGG 1 cut(s) 491
AflIII ACRYGT 1 cut(s) 515
AgsI TTSAA 2 cut(s) 218, 406
AjuI GAANNNNNNNTTGG 2 cut(s) 408, 440
AluBI AGCT 4 cut(s) 251, 287, 293, 424
AluI AGCT 4 cut(s) 251, 287, 293, 424
Alw26I GTCTC 1 cut(s) 506
AlwI GGATC 3 cut(s) 12, 266, 279
AlwNI CAGNNNCTG 1 cut(s) 386
Ama87I CYCGRG 1 cut(s) 490
AoxI GGCC 1 cut(s) 460
ApeKI GCWGC 3 cut(s) 248, 377, 380
ApoI RAATTY 1 cut(s) 389
AsuHPI GGTGA 1 cut(s) 577
AsuII TTCGAA 1 cut(s) 444
AvaI CYCGRG 1 cut(s) 490
BamHI GGATCC 1 cut(s) 271
BanII GRGCYC 1 cut(s) 128
BbvI GCAGC 3 cut(s) 260, 389, 392
BcgI CGANNNNNNTGC 2 cut(s) 133, 167
BcoDI GTCTC 1 cut(s) 506
BfaI CTAG 2 cut(s) 294, 600
BfmI CTRYAG 1 cut(s) 288
BfuAI ACCTGC 1 cut(s) 486
BglII AGATCT 1 cut(s) 106
BisI GCNGC 3 cut(s) 249, 378, 381
BlsI GCNGC 3 cut(s) 250, 379, 382
BmeT110I CYCGRG 1 cut(s) 490
BmiI GGNNCC 1 cut(s) 273
BmsI GCATC 1 cut(s) 423
BpmI CTGGAG 1 cut(s) 89
Bpu14I TTCGAA 1 cut(s) 444
BsaBI GATNNNNATC 1 cut(s) 276
Bsc4I CCNNNNNNNGG 1 cut(s) 491
Bse1I ACTGG 1 cut(s) 167
Bse8I GATNNNNATC 1 cut(s) 276
BseGI GGATG 3 cut(s) 174, 210, 351
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 491
BseMII CTCAG 1 cut(s) 258
BseNI ACTGG 1 cut(s) 167
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 3 cut(s) 260, 389, 392
BshFI GGCC 1 cut(s) 462
BsiHKCI CYCGRG 1 cut(s) 490
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 1 cut(s) 491
BsmAI GTCTC 1 cut(s) 506
BsmFI GGGAC 1 cut(s) 599
BsmI GAATGC 2 cut(s) 548, 603
BsnI GGCC 1 cut(s) 462
BsoBI CYCGRG 1 cut(s) 490
Bsp119I TTCGAA 1 cut(s) 444
Bsp1286I GDGCHC 1 cut(s) 128
Bsp143I GATC 4 cut(s) 4, 106, 226, 271
BspANI GGCC 1 cut(s) 462
BspCNI CTCAG 1 cut(s) 259
BspHI TCATGA 2 cut(s) 7, 48
BspLI GGNNCC 1 cut(s) 273
BspMI ACCTGC 1 cut(s) 486
BspPI GGATC 3 cut(s) 12, 266, 279
BspT104I TTCGAA 1 cut(s) 444
BsrI ACTGG 1 cut(s) 167
BssMI GATC 4 cut(s) 4, 106, 226, 271
Bst4CI ACNGT 1 cut(s) 486
Bst6I CTCTTC 1 cut(s) 563
BstBI TTCGAA 1 cut(s) 444
BstC8I GCNNGC 1 cut(s) 452
BstDEI CTNAG 1 cut(s) 267
BstF5I GGATG 3 cut(s) 174, 210, 351
BstKTI GATC 4 cut(s) 7, 109, 229, 274
BstMAI GTCTC 1 cut(s) 506
BstMBI GATC 4 cut(s) 4, 106, 226, 271
BstMWI GCNNNNNNNGC 1 cut(s) 528
BstNSI RCATGY 1 cut(s) 519
BstSFI CTRYAG 1 cut(s) 288
BstV1I GCAGC 3 cut(s) 260, 389, 392
BstX2I RGATCY 2 cut(s) 106, 271
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 2 cut(s) 106, 271
BsuRI GGCC 1 cut(s) 462
BtsCI GGATG 3 cut(s) 174, 210, 351
BveI ACCTGC 1 cut(s) 486
Cac8I GCNNGC 1 cut(s) 452
CaiI CAGNNNCTG 1 cut(s) 386
CciI TCATGA 2 cut(s) 7, 48
CviAII CATG 4 cut(s) 8, 49, 230, 516
CviJI RGCY 7 cut(s) 126, 190, 251, 287, 293, 424, 462
CviKI_1 RGCY 7 cut(s) 126, 190, 251, 287, 293, 424, 462
DdeI CTNAG 1 cut(s) 267
DpnI GATC 4 cut(s) 6, 108, 228, 273
DpnII GATC 4 cut(s) 4, 106, 226, 271
Eam1104I CTCTTC 1 cut(s) 563
EarI CTCTTC 1 cut(s) 563
Eco24I GRGCYC 1 cut(s) 128
Eco88I CYCGRG 1 cut(s) 490
EcoT38I GRGCYC 1 cut(s) 128
FaeI CATG 4 cut(s) 11, 52, 233, 519
FalI AAGNNNNNCTT 7 cut(s) 35, 93, 125, 113, 145, 408, 440
FaqI GGGAC 1 cut(s) 599
FatI CATG 4 cut(s) 7, 48, 229, 515
FauNDI CATATG 1 cut(s) 194
Fnu4HI GCNGC 3 cut(s) 249, 378, 381
FokI GGATG 3 cut(s) 161, 197, 358
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 3 cut(s) 249, 378, 381
FspBI CTAG 2 cut(s) 294, 600
GluI GCNGC 3 cut(s) 249, 378, 381
GsuI CTGGAG 1 cut(s) 89
HaeIII GGCC 1 cut(s) 462
Hin1II CATG 4 cut(s) 11, 52, 233, 519
HinfI GANTC 2 cut(s) 81, 200
HphI GGTGA 1 cut(s) 577
Hpy166II GTNNAC 1 cut(s) 85
Hpy188I TCNGA 3 cut(s) 138, 268, 582
Hpy188III TCNNGA 5 cut(s) 8, 31, 49, 68, 608
Hpy8I GTNNAC 1 cut(s) 85
HpyAV CCTTC 3 cut(s) 70, 336, 440
HpyCH4III ACNGT 1 cut(s) 486
HpyCH4V TGCA 2 cut(s) 154, 522
HpyF10VI GCNNNNNNNGC 1 cut(s) 528
HpyF3I CTNAG 1 cut(s) 267
Hsp92II CATG 4 cut(s) 11, 52, 233, 519
Kzo9I GATC 4 cut(s) 4, 106, 226, 271
LmnI GCTCC 1 cut(s) 362
LpnPI CCDG 7 cut(s) 16, 53, 162, 180, 237, 481, 621
Lsp1109I GCAGC 3 cut(s) 260, 389, 392
LweI GCATC 1 cut(s) 423
MaeI CTAG 2 cut(s) 294, 600
MaeIII GTNAC 1 cut(s) 258
MalI GATC 4 cut(s) 6, 108, 228, 273
MboI GATC 4 cut(s) 4, 106, 226, 271
MboII GAAGA 5 cut(s) 113, 116, 334, 580, 658
MflI RGATCY 2 cut(s) 106, 271
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 4 cut(s) 60, 389, 523, 657
MlyI GAGTC 1 cut(s) 90
MnlI CCTC 6 cut(s) 64, 215, 262, 473, 564, 576
MslI CAYNNNNRTG 1 cut(s) 53
MspA1I CMGCKG 1 cut(s) 251
Mva1269I GAATGC 2 cut(s) 548, 603
MwoI GCNNNNNNNGC 1 cut(s) 528
NdeI CATATG 1 cut(s) 194
NdeII GATC 4 cut(s) 4, 106, 226, 271
NlaIII CATG 4 cut(s) 11, 52, 233, 519
NlaIV GGNNCC 1 cut(s) 273
NspI RCATGY 1 cut(s) 519
NspV TTCGAA 1 cut(s) 444
PagI TCATGA 2 cut(s) 7, 48
PciI ACATGT 1 cut(s) 515
PctI GAATGC 2 cut(s) 548, 603
PfeI GAWTC 1 cut(s) 200
PkrI GCNGC 3 cut(s) 250, 379, 382
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
PscI ACATGT 1 cut(s) 515
PspN4I GGNNCC 1 cut(s) 273
PstNI CAGNNNCTG 1 cut(s) 386
PsuI RGATCY 2 cut(s) 106, 271
PvuII CAGCTG 1 cut(s) 251
RseI CAYNNNNRTG 1 cut(s) 53
SatI GCNGC 3 cut(s) 249, 378, 381
Sau3AI GATC 4 cut(s) 4, 106, 226, 271
SchI GAGTC 1 cut(s) 90
SduI GDGCHC 1 cut(s) 128
SetI ASST 6 cut(s) 253, 289, 295, 426, 500, 575
SfaNI GCATC 1 cut(s) 423
SfcI CTRYAG 1 cut(s) 288
SfuI TTCGAA 1 cut(s) 444
SmiMI CAYNNNNRTG 1 cut(s) 53
Sse9I AATT 4 cut(s) 60, 389, 523, 657
SspMI CTAG 2 cut(s) 294, 600
TaaI ACNGT 1 cut(s) 486
TaqI TCGA 2 cut(s) 315, 444
TasI AATT 4 cut(s) 60, 389, 523, 657
TfiI GAWTC 1 cut(s) 200
TseI GCWGC 3 cut(s) 248, 377, 380
TspDTI ATGAA 2 cut(s) 24, 163
XapI RAATTY 1 cut(s) 389
XceI RCATGY 1 cut(s) 519
XspI CTAG 2 cut(s) 294, 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.