AT1G78380

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
29486387 .. 29488007
1621 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78380.1

Sequence Viewer

Length: 660 bp
ATGGCGAACGAGGTGATTCTTCTTGATTTCTGGCCGAGTATGTTCGGGATGAGGACAAGGATCGCATTGAGGGAGAAAGGTGTTGAATTTGAGTACAGAGAAGAAGATCTAAGGAACAAGAGTCCTTTGCTTCTCCAGATGAATCCGATTCACAAGAAGATTCCTGTTCTCATCCACAATGGTAAACCGGTTAACGAATCTATCATCCAGGTTCAGTACATTGACGAGGTCTGGTCTCACAAGAACCCTATCCTTCCTTCTGATCCTTACCTGAGAGCTCAAGCTAGGTTCTGGGCTGATTTCATTGACAAGAAGCTGTATGATGCTCAGAGGAAGGTGTGGGCGACAAAGGGTGAGGAACAAGAGGCAGGGAAGAAGGATTTCATTGAGATACTCAAGACTCTTGAATCTGAGCTTGGAGACAAACCTTACTTTAGTGGCGATGACTTTGGCTATGTAGACATTGCGTTGATTGGATTCTACACATGGTTTCCAGCATACGAGAAGTTTGCTAACTTCAGTATCGAATCTGAGGTTCCGAAACTGATTGCTTGGGTTAAGAAGTGTTTGCAGAGGGAGAGCGTGGCTAAGTCCTTGCCTGATCCTGAGAAGGTTACTGAATTCGTCTCTGAGCTCAGGAAGAAATTTGTACCTGAGTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

219

Amino Acids

25.65

Weight (kDa)

5.8

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 1.9e-18 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 5.9e-11 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 13 - 76 6.8e-10 Glutathione S-transferase, N-terminal domain
GST_C PF00043 117 - 193 3.2e-10 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 121 - 187 1.4e-10 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 459
AclWI GGATC 3 cut(s) 68, 257, 596
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 3 cut(s) 86, 620, 644
AcuI CTGAAG 1 cut(s) 502
AfaI GTAC 3 cut(s) 95, 218, 651
AgeI ACCGGT 1 cut(s) 187
AgsI TTSAA 2 cut(s) 86, 407
AjnI CCWGG 1 cut(s) 207
AjuI GAANNNNNNNTTGG 2 cut(s) 399, 431
AluBI AGCT 5 cut(s) 278, 284, 316, 415, 634
AluI AGCT 5 cut(s) 278, 284, 316, 415, 634
Alw21I GWGCWC 2 cut(s) 280, 636
Alw26I GTCTC 3 cut(s) 240, 414, 631
AlwI GGATC 3 cut(s) 68, 257, 596
AoxI GGCC 1 cut(s) 32
ApoI RAATTY 3 cut(s) 86, 620, 644
AsiGI ACCGGT 1 cut(s) 187
Asp700I GAANNNNTTC 1 cut(s) 380
AsuHPI GGTGA 2 cut(s) 25, 365
BaeI ACNNNNGTAYC 2 cut(s) 505, 538
BanII GRGCYC 2 cut(s) 280, 636
Bbv12I GWGCWC 2 cut(s) 280, 636
BcgI CGANNNNNNTGC 2 cut(s) 491, 525
BciT130I CCWGG 1 cut(s) 209
BcoDI GTCTC 3 cut(s) 240, 414, 631
BfaI CTAG 1 cut(s) 285
BglII AGATCT 1 cut(s) 106
Bme1390I CCNGG 1 cut(s) 209
BmiI GGNNCC 1 cut(s) 537
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 313
BpmI CTGGAG 1 cut(s) 119
Bpu10I CCTNAGC 1 cut(s) 635
BpuEI CTTGAG 2 cut(s) 264, 380
BsaI GGTCTC 1 cut(s) 240
BsaWI WCCGGW 1 cut(s) 187
Bse118I RCCGGY 1 cut(s) 187
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 1 cut(s) 209
BseGI GGATG 3 cut(s) 54, 171, 204
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 8 cut(s) 263, 341, 402, 522, 597, 621, 645, 649
BshFI GGCC 1 cut(s) 34
BshTI ACCGGT 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 280, 636
BsiSI CCGG 1 cut(s) 188
BsmAI GTCTC 3 cut(s) 240, 414, 631
BsmBI CGTCTC 1 cut(s) 631
BsnI GGCC 1 cut(s) 34
Bso31I GGTCTC 1 cut(s) 240
Bsp1286I GDGCHC 2 cut(s) 280, 636
Bsp143I GATC 4 cut(s) 60, 106, 262, 601
BspANI GGCC 1 cut(s) 34
BspCNI CTCAG 8 cut(s) 264, 340, 403, 523, 598, 622, 646, 648
BspLI GGNNCC 1 cut(s) 537
BspPI GGATC 3 cut(s) 68, 257, 596
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 1 cut(s) 462
BsrFI RCCGGY 1 cut(s) 187
BssAI RCCGGY 1 cut(s) 187
BssMI GATC 4 cut(s) 60, 106, 262, 601
Bst2UI CCWGG 1 cut(s) 209
BstF5I GGATG 3 cut(s) 54, 171, 204
BstKTI GATC 4 cut(s) 63, 109, 265, 604
BstMAI GTCTC 3 cut(s) 240, 414, 631
BstMBI GATC 4 cut(s) 60, 106, 262, 601
BstNI CCWGG 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 207
BstX2I RGATCY 1 cut(s) 106
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 1 cut(s) 34
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 3 cut(s) 54, 171, 204
Cfr10I RCCGGY 1 cut(s) 187
Csp6I GTAC 3 cut(s) 94, 217, 650
CspAI ACCGGT 1 cut(s) 187
CviAII CATG 1 cut(s) 486
CviJI RGCY 9 cut(s) 34, 278, 284, 296, 316, 415, 453, 587, 634
CviKI_1 RGCY 9 cut(s) 34, 278, 284, 296, 316, 415, 453, 587, 634
CviQI GTAC 3 cut(s) 94, 217, 650
DpnI GATC 4 cut(s) 62, 108, 264, 603
DpnII GATC 4 cut(s) 60, 106, 262, 601
EaeI YGGCCR 1 cut(s) 32
Ecl136II GAGCTC 2 cut(s) 278, 634
Eco24I GRGCYC 2 cut(s) 280, 636
Eco31I GGTCTC 1 cut(s) 240
Eco53kI GAGCTC 2 cut(s) 278, 634
Eco57I CTGAAG 1 cut(s) 502
EcoICRI GAGCTC 2 cut(s) 278, 634
EcoRI GAATTC 1 cut(s) 620
EcoRII CCWGG 1 cut(s) 207
EcoT38I GRGCYC 2 cut(s) 280, 636
Esp3I CGTCTC 1 cut(s) 631
FaeI CATG 1 cut(s) 489
FaiI YATR 5 cut(s) 41, 321, 456, 487, 499
FatI CATG 1 cut(s) 485
FblI GTMKAC 1 cut(s) 459
FokI GGATG 3 cut(s) 61, 158, 191
FriOI GRGCYC 2 cut(s) 280, 636
FspBI CTAG 1 cut(s) 285
GsuI CTGGAG 1 cut(s) 119
HaeIII GGCC 1 cut(s) 34
HapII CCGG 1 cut(s) 188
Hin1II CATG 1 cut(s) 489
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HpaI GTTAAC 1 cut(s) 193
HpaII CCGG 1 cut(s) 188
HphI GGTGA 2 cut(s) 25, 365
Hpy166II GTNNAC 3 cut(s) 185, 193, 460
Hpy188I TCNGA 7 cut(s) 147, 262, 330, 412, 532, 540, 631
Hpy188III TCNNGA 7 cut(s) 23, 46, 136, 397, 404, 605, 637
Hpy8I GTNNAC 3 cut(s) 185, 193, 460
HpyAV CCTTC 5 cut(s) 263, 267, 328, 370, 604
HpyCH4V TGCA 1 cut(s) 571
Hsp92II CATG 1 cut(s) 489
KspAI GTTAAC 1 cut(s) 193
Kzo9I GATC 4 cut(s) 60, 106, 262, 601
LweI GCATC 1 cut(s) 313
MaeI CTAG 1 cut(s) 285
MaeIII GTNAC 1 cut(s) 613
MalI GATC 4 cut(s) 62, 108, 264, 603
MboI GATC 4 cut(s) 60, 106, 262, 601
MboII GAAGA 6 cut(s) 11, 113, 116, 169, 385, 652
MflI RGATCY 1 cut(s) 106
MhlI GDGCHC 2 cut(s) 280, 636
MluCI AATT 3 cut(s) 86, 620, 644
MlyI GAGTC 2 cut(s) 130, 394
MnlI CCTC 9 cut(s) 4, 45, 63, 220, 324, 349, 358, 526, 567
MroXI GAANNNNTTC 1 cut(s) 380
MseI TTAA 2 cut(s) 192, 558
MspI CCGG 1 cut(s) 188
MspR9I CCNGG 1 cut(s) 209
MvaI CCWGG 1 cut(s) 209
NdeII GATC 4 cut(s) 60, 106, 262, 601
NlaIII CATG 1 cut(s) 489
NlaIV GGNNCC 1 cut(s) 537
NmeAIII GCCGAG 1 cut(s) 60
PdmI GAANNNNTTC 1 cut(s) 380
PfeI GAWTC 8 cut(s) 16, 142, 148, 160, 197, 407, 477, 527
PflFI GACNNNGTC 1 cut(s) 227
PinAI ACCGGT 1 cut(s) 187
PleI GAGTC 2 cut(s) 129, 394
PpsI GAGTC 2 cut(s) 129, 394
Psp124BI GAGCTC 2 cut(s) 280, 636
Psp6I CCWGG 1 cut(s) 207
PspGI CCWGG 1 cut(s) 207
PspN4I GGNNCC 1 cut(s) 537
PsuI RGATCY 1 cut(s) 106
PsyI GACNNNGTC 1 cut(s) 227
RsaI GTAC 3 cut(s) 95, 218, 651
RsaNI GTAC 3 cut(s) 94, 217, 650
SacI GAGCTC 2 cut(s) 280, 636
SaqAI TTAA 2 cut(s) 192, 558
Sau3AI GATC 4 cut(s) 60, 106, 262, 601
SchI GAGTC 2 cut(s) 130, 394
ScrFI CCNGG 1 cut(s) 209
SduI GDGCHC 2 cut(s) 280, 636
SfaNI GCATC 1 cut(s) 313
SmlI CTYRAG 2 cut(s) 279, 395
SmoI CTYRAG 2 cut(s) 279, 395
Sse9I AATT 3 cut(s) 86, 620, 644
SspMI CTAG 1 cut(s) 285
SstI GAGCTC 2 cut(s) 280, 636
StyD4I CCNGG 1 cut(s) 207
TaqI TCGA 1 cut(s) 525
TasI AATT 3 cut(s) 86, 620, 644
TatI WGTACW 2 cut(s) 93, 216
TfiI GAWTC 8 cut(s) 16, 142, 148, 160, 197, 407, 477, 527
Tru1I TTAA 2 cut(s) 192, 558
Tru9I TTAA 2 cut(s) 192, 558
TspDTI ATGAA 3 cut(s) 155, 292, 373
Tth111I GACNNNGTC 1 cut(s) 227
XapI RAATTY 3 cut(s) 86, 620, 644
XmiI GTMKAC 1 cut(s) 459
XmnI GAANNNNTTC 1 cut(s) 380
XspI CTAG 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.