AT1G17180

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5872024 .. 5873124
1101 bp
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UTR
Exon/CDS
Intron
AT1G17180.1

Sequence Viewer

Length: 666 bp
ATGGCAGACGAGGTGATTCTTCTTGATTTCTGGCCGAGCATGTTTGGAATGAGGACGAGGATTGCTTTAGAAGAGAAAAATGTCAAATTCGATTACAGAGAACAAGATCTGTGGAACAAAAGCCCGATTCTCCTCGAGATGAATCCGGTTCATAAGAAAATACCGGTTCTCATCCACAATGGTAATCCGGTATGTGAATCACTCATCCAGATCGAATACATCGACGAAGTTTGGCCTAGCAAAACCCCACTTCTTCCTTCTGATCCTTACCAAAGAGCTCAGGCCAAATTTTGGGGAGATTTCATTGATAAGAAGGTGTATGCTTCAGCGAGGTTGATTTGGGGAGCTAAAGGCGAAGAGCATGAGGCGGGGAAGAAGGAGTTCATCGAGATACTCAAGACACTAGAGTCTGAGCTTGGAGACAAGACTTACTTTGGAGGTGAAACATTCGGTTATGTTGATATAGCTCTCATTGGATTTTACAGTTGGTTTGAAGCGTATGAGAAGTTTGGGAGTTTCAGCATTGAAGCCGAGTGTCCAAAACTGATTGCTTGGGGTAAAAGGTGTGTGGAGAGAGAGAGTGTGGCTAAGTCTCTTCCTGATTCGGAGAAGATCATTAAGTTCGTTCCTGAGCTAAGGAAAAAACTTGGGATCGAAATCGAATAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

221

Amino Acids

25.59

Weight (kDa)

5.25

Isoelectric Point (pI)

46.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 5 - 76 4.3e-15 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 13 - 76 7.5e-12 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 13 - 76 4.7e-10 Glutathione S-transferase, N-terminal domain
GST_C PF00043 117 - 193 9.8e-10 Glutathione S-transferase, C-terminal domain
GST_C_2 PF13410 120 - 185 4.8e-11 Glutathione S-transferase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000304)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17170 AT1G17180 AT1G78340 AT1G78370 AT1G78380
fragaria_vesca FvH4_3g16210 FvH4_3g16230 FvH4_3g16240 FvH4_3g16240 FvH4_3g16250 FvH4_3g16290 FvH4_4g11790
malus_domestica MD04G1033800.v1.1 MD05G1209700.v1.1 MD05G1210000.v1.1 MD05G1210100.v1.1 MD05G1210200.v1.1 MD05G1210400.v1.1 MD05G1210600.v1.1 MD05G1210700.v1.1 MD05G1211000.v1.1 MD05G1211400.v1.1 MD10G1196300.v1.1 MD10G1196600.v1.1 MD10G1196900.v1.1 MD10G1197100.v1.1
prunus_persica Prupe.1G180800_v2.0.a1 Prupe.4G145800_v2.0.a1 Prupe.4G145900_v2.0.a1 Prupe.4G146000_v2.0.a1 Prupe.4G146100_v2.0.a1 Prupe.4G146200_v2.0.a1 Prupe.4G146400_v2.0.a1 Prupe.4G146500_v2.0.a1 Prupe.4G146800_v2.0.a1 Prupe.4G147000_v2.0.a1 Prupe.4G147200_v2.0.a1 Prupe.4G147400_v2.0.a1 Prupe.4G147800_v2.0.a1
pyrus_communis pycom05g19570 pycom05g19590 pycom05g19600 pycom05g19620 pycom05g19630 pycom10g16980
rosa_chinensis RchiOBHm_Chr5g0026581 RchiOBHm_Chr5g0027291 RchiOBHm_Chr5g0027311 RchiOBHm_Chr5g0027331 RchiOBHm_Chr5g0027341 RchiOBHm_Chr5g0027351 RchiOBHm_Chr5g0027361 RchiOBHm_Chr5g0027381 RchiOBHm_Chr5g0027391
rosa_laevigata RLG00000023802 RLG00000032937 RLG00000033008 RLG00000033009 RLG00000033010 RLG00000033011 RLG00000033012 RLG00000033014 RLG00000033015
rosa_multiflora Rmu_sc0001348.1_g000012 Rmu_sc0001348.1_g000018 Rmu_sc0001526.1_g000022 Rmu_sc0003500.1_g000007 Rmu_sc0003500.1_g000014 Rmu_sc0003500.1_g000018 Rmu_sc0003500.1_g000022 Rmu_sc0003500.1_g000023 Rmu_sc0003500.1_g000027 Rmu_sc0003500.1_g000035 Rmu_sc0004371.1_g000001 Rmu_sc0006854.1_g000010 Rmu_sc0006854.1_g000013 Rmu_sc0007802.1_g000003 Rmu_sc0007802.1_g000006 Rmu_sc0007802.1_g000008 Rmu_sc0007802.1_g000011 Rmu_sc0007802.1_g000012 Rmu_sc0041677.1_g000002 Rmu_ssc0000372.1_g000062
rosa_roxburghii Rroxscaffold_1G00052130 Rroxscaffold_1G00052140 Rroxscaffold_1G00052160 Rroxscaffold_1G00052170 Rroxscaffold_1G00052180 Rroxscaffold_1G00052200 Rroxscaffold_1G00052900 Rroxscaffold_4G00329120 Rroxscaffold_4G00329130 Rroxscaffold_6G00405750
rosa_rugosa Rorug01G0093600 Rorug03G0151900 Rorug05G0098200 Rorug05G0098300 Rorug05G0098400 Rorug05G0098500
rosa_samantha Rh3AG202100 Rh5AG187300 Rh5AG192300 Rh5AG192500 Rh5AG192600 Rh5AG192700 Rh5BG190100 Rh5BG190200 Rh5CG203800 Rh5CG210500 Rh5CG210600 Rh5CG210700 Rh5CG210800
rosa_wichuraiana Rw5G016960 Rw5G017500 Rw5G017510 Rw5G017520 Rw5G017530 Rw5G017540 Rw5G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 406
AccB7I CCANNNNNTGG 1 cut(s) 291
AciI CCGC 1 cut(s) 368
AclWI GGATC 2 cut(s) 257, 659
AcoI YGGCCR 1 cut(s) 32
AcsI RAATTY 2 cut(s) 86, 287
AcuI CTGAAG 1 cut(s) 309
AfiI CCNNNNNNNGG 1 cut(s) 291
AgeI ACCGGT 1 cut(s) 163
AgsI TTSAA 2 cut(s) 494, 527
AluBI AGCT 5 cut(s) 278, 347, 415, 467, 634
AluI AGCT 5 cut(s) 278, 347, 415, 467, 634
Alw21I GWGCWC 1 cut(s) 280
Alw26I GTCTC 2 cut(s) 414, 597
AlwI GGATC 2 cut(s) 257, 659
Ama87I CYCGRG 1 cut(s) 134
AoxI GGCC 3 cut(s) 32, 233, 282
ApoI RAATTY 2 cut(s) 86, 287
AsiGI ACCGGT 1 cut(s) 163
Asp700I GAANNNNTTC 1 cut(s) 380
AsuHPI GGTGA 2 cut(s) 25, 452
AvaI CYCGRG 1 cut(s) 134
BanII GRGCYC 1 cut(s) 280
Bbv12I GWGCWC 1 cut(s) 280
BcoDI GTCTC 2 cut(s) 414, 597
BfaI CTAG 2 cut(s) 237, 404
BglII AGATCT 1 cut(s) 106
BmeT110I CYCGRG 1 cut(s) 134
Bpu10I CCTNAGC 3 cut(s) 279, 630, 635
BpuEI CTTGAG 1 cut(s) 380
BsaBI GATNNNNATC 1 cut(s) 656
BsaWI WCCGGW 3 cut(s) 145, 163, 187
Bsc4I CCNNNNNNNGG 1 cut(s) 291
Bse118I RCCGGY 1 cut(s) 163
Bse8I GATNNNNATC 1 cut(s) 656
BseGI GGATG 2 cut(s) 171, 204
BseJI GATNNNNATC 1 cut(s) 656
BseLI CCNNNNNNNGG 1 cut(s) 291
BseMII CTCAG 3 cut(s) 293, 402, 621
BseRI GAGGAG 1 cut(s) 122
BshFI GGCC 3 cut(s) 34, 235, 284
BshTI ACCGGT 1 cut(s) 163
BsiHKAI GWGCWC 1 cut(s) 280
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 3 cut(s) 146, 164, 188
BslI CCNNNNNNNGG 1 cut(s) 291
BsmAI GTCTC 2 cut(s) 414, 597
BsnI GGCC 3 cut(s) 34, 235, 284
BsoBI CYCGRG 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 280
Bsp143I GATC 5 cut(s) 106, 210, 262, 612, 651
BspACI CCGC 1 cut(s) 368
BspANI GGCC 3 cut(s) 34, 235, 284
BspCNI CTCAG 3 cut(s) 292, 403, 622
BspPI GGATC 2 cut(s) 257, 659
BspQI GCTCTTC 1 cut(s) 351
BsrFI RCCGGY 1 cut(s) 163
BssAI RCCGGY 1 cut(s) 163
BssMI GATC 5 cut(s) 106, 210, 262, 612, 651
Bst4CI ACNGT 1 cut(s) 485
Bst6I CTCTTC 3 cut(s) 66, 351, 600
BstDEI CTNAG 5 cut(s) 279, 411, 588, 630, 635
BstF5I GGATG 2 cut(s) 171, 204
BstKTI GATC 5 cut(s) 109, 213, 265, 615, 654
BstMAI GTCTC 2 cut(s) 414, 597
BstMBI GATC 5 cut(s) 106, 210, 262, 612, 651
BstNSI RCATGY 1 cut(s) 43
BstX2I RGATCY 1 cut(s) 106
BstYI RGATCY 1 cut(s) 106
BsuRI GGCC 3 cut(s) 34, 235, 284
BtsCI GGATG 2 cut(s) 171, 204
Cfr10I RCCGGY 1 cut(s) 163
CspAI ACCGGT 1 cut(s) 163
CspCI CAANNNNNGTGG 2 cut(s) 92, 127
CviAII CATG 2 cut(s) 40, 362
DdeI CTNAG 5 cut(s) 279, 411, 588, 630, 635
DpnI GATC 5 cut(s) 108, 212, 264, 614, 653
DpnII GATC 5 cut(s) 106, 210, 262, 612, 651
DrdI GACNNNNNNGTC 1 cut(s) 406
DseDI GACNNNNNNGTC 1 cut(s) 406
EaeI YGGCCR 1 cut(s) 32
Eam1104I CTCTTC 3 cut(s) 66, 351, 600
EarI CTCTTC 3 cut(s) 66, 351, 600
Ecl136II GAGCTC 1 cut(s) 278
Eco24I GRGCYC 1 cut(s) 280
Eco53kI GAGCTC 1 cut(s) 278
Eco57I CTGAAG 1 cut(s) 309
Eco88I CYCGRG 1 cut(s) 134
EcoICRI GAGCTC 1 cut(s) 278
EcoT38I GRGCYC 1 cut(s) 280
FaeI CATG 2 cut(s) 43, 365
FaiI YATR 8 cut(s) 41, 153, 193, 321, 363, 456, 464, 501
FalI AAGNNNNNCTT 2 cut(s) 416, 448
FatI CATG 2 cut(s) 39, 361
FauI CCCGC 1 cut(s) 361
FokI GGATG 2 cut(s) 158, 191
FriOI GRGCYC 1 cut(s) 280
FspBI CTAG 2 cut(s) 237, 404
HaeIII GGCC 3 cut(s) 34, 235, 284
HapII CCGG 3 cut(s) 146, 164, 188
Hin1II CATG 2 cut(s) 43, 365
HinfI GANTC 6 cut(s) 16, 127, 142, 197, 407, 602
HpaII CCGG 3 cut(s) 146, 164, 188
HphI GGTGA 2 cut(s) 25, 452
Hpy188I TCNGA 3 cut(s) 262, 412, 607
Hpy188III TCNNGA 7 cut(s) 23, 136, 208, 388, 397, 599, 629
Hpy99I CGWCG 1 cut(s) 227
HpyAV CCTTC 3 cut(s) 267, 307, 370
HpyCH4III ACNGT 1 cut(s) 485
HpyF3I CTNAG 5 cut(s) 279, 411, 588, 630, 635
Hsp92II CATG 2 cut(s) 43, 365
Kzo9I GATC 5 cut(s) 106, 210, 262, 612, 651
LguI GCTCTTC 1 cut(s) 351
LmnI GCTCC 1 cut(s) 344
LpnPI CCDG 8 cut(s) 16, 159, 177, 201, 221, 266, 612, 642
MaeI CTAG 2 cut(s) 237, 404
MalI GATC 5 cut(s) 108, 212, 264, 614, 653
MboI GATC 5 cut(s) 106, 210, 262, 612, 651
MboII GAAGA 7 cut(s) 11, 83, 245, 368, 385, 587, 622
MflI RGATCY 1 cut(s) 106
MhlI GDGCHC 1 cut(s) 280
MluCI AATT 2 cut(s) 86, 287
MlyI GAGTC 1 cut(s) 416
MnlI CCTC 7 cut(s) 4, 45, 51, 143, 324, 358, 431
MroXI GAANNNNTTC 1 cut(s) 380
MseI TTAA 1 cut(s) 618
MspI CCGG 3 cut(s) 146, 164, 188
NdeII GATC 5 cut(s) 106, 210, 262, 612, 651
NlaIII CATG 2 cut(s) 43, 365
NmeAIII GCCGAG 2 cut(s) 60, 556
NspI RCATGY 1 cut(s) 43
PaeR7I CTCGAG 1 cut(s) 134
PciSI GCTCTTC 1 cut(s) 351
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 380
PfeI GAWTC 5 cut(s) 16, 127, 142, 197, 602
PflMI CCANNNNNTGG 1 cut(s) 291
PinAI ACCGGT 1 cut(s) 163
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
Psp124BI GAGCTC 1 cut(s) 280
PsuI RGATCY 1 cut(s) 106
SacI GAGCTC 1 cut(s) 280
SapI GCTCTTC 1 cut(s) 351
SaqAI TTAA 1 cut(s) 618
Sau3AI GATC 5 cut(s) 106, 210, 262, 612, 651
SchI GAGTC 1 cut(s) 416
SduI GDGCHC 1 cut(s) 280
Sfr274I CTCGAG 1 cut(s) 134
SlaI CTCGAG 1 cut(s) 134
SmlI CTYRAG 2 cut(s) 134, 395
SmoI CTYRAG 2 cut(s) 134, 395
Sse9I AATT 2 cut(s) 86, 287
SsiI CCGC 1 cut(s) 368
SspMI CTAG 2 cut(s) 237, 404
SstI GAGCTC 1 cut(s) 280
TaaI ACNGT 1 cut(s) 485
TaqI TCGA 7 cut(s) 90, 135, 213, 222, 387, 654, 660
TasI AATT 2 cut(s) 86, 287
TfiI GAWTC 5 cut(s) 16, 127, 142, 197, 602
Tru1I TTAA 1 cut(s) 618
Tru9I TTAA 1 cut(s) 618
TspDTI ATGAA 4 cut(s) 140, 155, 292, 373
Van91I CCANNNNNTGG 1 cut(s) 291
XapI RAATTY 2 cut(s) 86, 287
XceI RCATGY 1 cut(s) 43
XhoI CTCGAG 1 cut(s) 134
XmnI GAANNNNTTC 1 cut(s) 380
XspI CTAG 2 cut(s) 237, 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.