FvH4_3g01330

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000724
Physical Location & Seq
Forward (+)
674610 .. 678275
3666 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01330.t1

Sequence Viewer

Length: 2079 bp
ATGGCAGAAATGCATACTTCCAGCCAAATCATATCCCTGAACGACGACACAGCCCTCCATATGAAGATTTACATGGGGGAAGAAAGTATCGCGATAGGAATCATCGAAGCAAGCAGTCAGGAGCAAATTACAAAAGCCAATAAGTTTGGAAACACAGCTCTTCATGAAGCTGTAGCAACTGGTTGTGTACCAGTTGTGAAGAAGTTGTTGCAAAAGGCACCGAAGTTGCTGGACACTCCAAACAAGAAAGGAGAAAGGCCTCTCTACACAGCAGCTCACTTTGGTCAGACCGAAATTTTCAACTTGCTAGCTGAACAACTGAAAAATGTTCCTGATCTTAGAGTCCATTTCTGCTCCATGTATCCTGCTGAAAAACATGAGTTCTCCTACCACCCTCAACGCATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAATTCTTTGAGCTTGCACTTAGCATAGCTAAAACGCCGAAGTATGCAAAAACTGTTCAACAAATGGACAAAAATTCGAAGACTCCTCTTCACCTCCTCTCATCCAATTCTTCAGCATTCAAGAGTGGAATGAAATATGGACAAATCAAGAGGTTCATTTACAACTGTGCTCCATATGAAGATGCTAATGGAGAATATGCTCATGAACAAAATTCCAGTGATGATACTAATGGAGAAGATGCTCATAAACAAAATTCCAAACGATCAGCTACTCTGTTTCGAATTCTAAGACGAGTCATCTCTTCAGTTAATAGATCGGTTTGGAATGTTCTTCGAGCATGGAGTACCATGAAGAACATCTACGACGAAAAGAAGAGGCATGGATTGGCTTTTGAACTCGCCAAGATTCTGATTGTAGCAGACCATTCATGGGACGTCACACGAGTATCAGCAATTGAAGGCATGGATGAGACTGCTCGTGAAAATGTCCCACGCCCAGATTCCAATAATTCAGATGGAGAAACAACAAACCGATCACTGAAAAAGAATACTCCTCCTATTCCATTGTACATTGCAACAGAACATGGAATATTTGAAATTCTGAAGGAGATTCTTACAGTCCACAAAGCGGCATACGAGTATAGAAATACAAAGGATCAAAACATACTGCACCTGGCCATTATGCACCGTCAGTGGAAAATCTTTGAGCTTGTAATAGATATGGACGGAACTAGGAAGAGGTTGATACGACAACTCGATACGAATAACTTCACGGTATTGCACCATGTTGGCAACGTAGACTATTACAATGGGGGCACCCAGCCTGGTCCTGCACTCCAATTGCAAGAAGAGCTAAAGTGGTTCGAGAAGGTGAAGGCGTTAATGCCACAACATTATCAAAAATTCCGTGCTCGGGAAGACAAAGACACCACCCCCCTACAGAGCTTTCATGAAAGATATGTAGAGATTCTCAAAGACTTATCGAAATCTGAGAACATTGCCGTGGATAAGATAACAACACCCGATGATCCTGAAGGAAAGAAATATGAGATCCCGTCTGAGATCCCTAAAGAGTACTTTCGTCGCACACATGATCCGCTTCTCAACAGCGCACGAGAATGGCTGAAGCGGACCTCCGAGTCGTGCTCGACGGTGGCCGGACTAATGGCCACCGTCGCCTTCACAGCCGCCTTCACCGTCCCTGGAGGCAACGACGAGCAAAGTGGCACTCCACGCCTTCTTCACAGCCCTTTCTTCTTGGTCTTCGTAATCACCGACGCTCTATCCCTAGCCAGCTCGCTGACTTCACTCGTCATGTTCCTCTCCATCCTGACGTCACCGTTCGAGCTCGAGGACTTCCGACACTCTCTCCCTCGGAAGCTCATCCTCGGCTTCACCTTCCTCTTCTTATCGGTGGTGGTGACCATGGTGGCCTTTGCCTCCACTCTGATGCTGACAATTTCCATGAAGAATAGAGTGATCAAAATTTTCGTCTACTGTGTTGCGTTTCTTCCCGTCAGCGTGTTTGCACTGTTGCAGTTCCCGTTGTGGGTGGCCTTCAAAAAGAGTCTCGAGGCCATGCAAAGCGTATGGCGTTCAATCTTGCCTGCGACTCATTCGAAAACCGCCAAGACCCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

693

Amino Acids

78.58

Weight (kDa)

8.94

Isoelectric Point (pI)

44.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 43 - 106 2.5e-08 Ankyrin repeats (3 copies)
Ank_4 PF13637 54 - 103 5.8e-06 Ankyrin repeats (many copies)
PGG PF13962 519 - 631 2e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1576
AatII GACGTC 2 cut(s) 876, 1775
AccB1I GGYRCC 2 cut(s) 217, 1253
AccI GTMKAC 2 cut(s) 1236, 1932
AccII CGCG 1 cut(s) 92
AciI CCGC 5 cut(s) 1067, 1535, 1567, 1626, 2064
AclWI GGATC 5 cut(s) 1101, 1460, 1483, 1495, 1526
AcoI YGGCCR 3 cut(s) 1113, 1593, 1605
AcsI RAATTY 9 cut(s) 294, 440, 511, 649, 691, 720, 1035, 1340, 1923
AcuI CTGAAG 5 cut(s) 534, 726, 1061, 1491, 1583
AcyI GRCGYC 2 cut(s) 873, 1772
AfaI GTAC 5 cut(s) 189, 412, 784, 1007, 1514
AfiI CCNNNNNNNGG 4 cut(s) 868, 1066, 1351, 1987
AgsI TTSAA 8 cut(s) 301, 497, 559, 833, 896, 1034, 1999, 2037
AjnI CCWGG 3 cut(s) 1110, 1261, 1639
Alw21I GWGCWC 4 cut(s) 610, 1351, 1586, 1788
Alw26I GTCTC 2 cut(s) 902, 2012
AlwI GGATC 5 cut(s) 1101, 1460, 1483, 1495, 1526
Ama87I CYCGRG 3 cut(s) 1350, 1787, 2009
AoxI GGCC 7 cut(s) 257, 1113, 1593, 1605, 1869, 1992, 2013
ApeKI GCWGC 2 cut(s) 272, 425
ApoI RAATTY 9 cut(s) 294, 440, 511, 649, 691, 720, 1035, 1340, 1923
ArsI GACNNNNNNTTYG 2 cut(s) 1914, 1946
Asp700I GAANNNNTTC 1 cut(s) 1205
AspLEI GCGC 1 cut(s) 1550
AspS9I GGNCC 2 cut(s) 1265, 1569
AsuHPI GGTGA 7 cut(s) 521, 1321, 1624, 1702, 1767, 1825, 1870
AsuII TTCGAA 3 cut(s) 515, 718, 2057
AsuNHI GCTAGC 1 cut(s) 307
AvaI CYCGRG 3 cut(s) 1350, 1787, 2009
AvaII GGWCC 2 cut(s) 1265, 1569
BaeGI GKGCMC 1 cut(s) 1256
BaeI ACNNNNGTAYC 2 cut(s) 867, 900
BalI TGGCCA 2 cut(s) 1115, 1607
BanI GGYRCC 2 cut(s) 217, 1253
BanII GRGCYC 1 cut(s) 1788
BarI GAAGNNNNNNTAC 2 cut(s) 782, 814
BauI CACGAG 3 cut(s) 879, 915, 1551
BbsI GAAGAC 3 cut(s) 524, 1362, 1693
Bbv12I GWGCWC 4 cut(s) 610, 1351, 1586, 1788
BbvI GCAGC 2 cut(s) 284, 412
BccI CCATC 2 cut(s) 947, 1772
BceAI ACGGC 1 cut(s) 1424
BciT130I CCWGG 3 cut(s) 1112, 1263, 1641
BciVI GTATCC 1 cut(s) 372
BclI TGATCA 1 cut(s) 1917
BcoDI GTCTC 2 cut(s) 902, 2012
BfaI CTAG 3 cut(s) 308, 1170, 1727
BfmI CTRYAG 2 cut(s) 171, 1376
BfuI GTATCC 1 cut(s) 372
BisI GCNGC 4 cut(s) 273, 426, 1068, 1626
BlsI GCNGC 4 cut(s) 274, 427, 1069, 1627
BmcAI AGTACT 1 cut(s) 1514
Bme1390I CCNGG 3 cut(s) 1112, 1263, 1641
Bme18I GGWCC 2 cut(s) 1265, 1569
BmeT110I CYCGRG 3 cut(s) 1350, 1787, 2009
BmgT120I GGNCC 2 cut(s) 1265, 1569
BmiI GGNNCC 2 cut(s) 219, 1255
BmrFI CCNGG 3 cut(s) 1112, 1263, 1641
BmsI GCATC 3 cut(s) 610, 667, 1878
BmtI GCTAGC 1 cut(s) 311
BpiI GAAGAC 3 cut(s) 524, 1362, 1693
BplI GAGNNNNNCTC 2 cut(s) 1568, 1600
BpmI CTGGAG 1 cut(s) 1662
Bpu14I TTCGAA 3 cut(s) 515, 718, 2057
BsaBI GATNNNNATC 1 cut(s) 98
BsaHI GRCGYC 2 cut(s) 873, 1772
BsaJI CCNNGG 5 cut(s) 1440, 1639, 1811, 1825, 1863
BsaXI ACNNNNNCTCC 2 cut(s) 1791, 1821
Bsc4I CCNNNNNNNGG 4 cut(s) 868, 1066, 1351, 1987
Bse1I ACTGG 3 cut(s) 184, 191, 654
Bse3DI GCAATG 2 cut(s) 1008, 1434
Bse8I GATNNNNATC 1 cut(s) 98
BseBI CCWGG 3 cut(s) 1112, 1263, 1641
BseDI CCNNGG 5 cut(s) 1440, 1639, 1811, 1825, 1863
BseGI GGATG 4 cut(s) 539, 910, 1764, 1821
BseJI GATNNNNATC 1 cut(s) 98
BseLI CCNNNNNNNGG 4 cut(s) 868, 1066, 1351, 1987
BseMI GCAATG 2 cut(s) 1008, 1434
BseMII CTCAG 2 cut(s) 1419, 1488
BseNI ACTGG 3 cut(s) 184, 191, 654
BseRI GAGGAG 3 cut(s) 513, 524, 981
BseSI GKGCMC 1 cut(s) 1256
BseXI GCAGC 2 cut(s) 284, 412
BseYI CCCAGC 1 cut(s) 1257
BsgI GTGCAG 2 cut(s) 1091, 1254
Bsh1236I CGCG 1 cut(s) 92
BshFI GGCC 7 cut(s) 259, 1115, 1595, 1607, 1871, 1994, 2015
BshNI GGYRCC 2 cut(s) 217, 1253
BsiHKAI GWGCWC 4 cut(s) 610, 1351, 1586, 1788
BsiHKCI CYCGRG 3 cut(s) 1350, 1787, 2009
BsiSI CCGG 1 cut(s) 1596
BslFI GGGAC 3 cut(s) 884, 911, 1622
BslI CCNNNNNNNGG 4 cut(s) 868, 1066, 1351, 1987
BsmAI GTCTC 2 cut(s) 902, 2012
BsmFI GGGAC 3 cut(s) 884, 911, 1622
BsmI GAATGC 1 cut(s) 554
BsnI GGCC 7 cut(s) 259, 1115, 1595, 1607, 1871, 1994, 2015
BsoBI CYCGRG 3 cut(s) 1350, 1787, 2009
Bsp119I TTCGAA 3 cut(s) 515, 718, 2057
Bsp1286I GDGCHC 5 cut(s) 610, 1256, 1351, 1586, 1788
Bsp1407I TGTACA 1 cut(s) 1005
Bsp19I CCATGG 1 cut(s) 1863
Bsp68I TCGCGA 1 cut(s) 92
BspACI CCGC 5 cut(s) 1067, 1535, 1567, 1626, 2064
BspANI GGCC 7 cut(s) 259, 1115, 1595, 1607, 1871, 1994, 2015
BspCNI CTCAG 2 cut(s) 1420, 1489
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 3 cut(s) 163, 640, 1387
BspLI GGNNCC 2 cut(s) 219, 1255
BspOI GCTAGC 1 cut(s) 311
BspPI GGATC 5 cut(s) 1101, 1460, 1483, 1495, 1526
BspQI GCTCTTC 2 cut(s) 165, 1281
BspT104I TTCGAA 3 cut(s) 515, 718, 2057
BspT107I GGYRCC 2 cut(s) 217, 1253
BsrDI GCAATG 2 cut(s) 1008, 1434
BsrGI TGTACA 1 cut(s) 1005
BsrI ACTGG 3 cut(s) 184, 191, 654
BssECI CCNNGG 5 cut(s) 1440, 1639, 1811, 1825, 1863
BssNI GRCGYC 2 cut(s) 873, 1772
BssSI CACGAG 3 cut(s) 879, 915, 1551
BssT1I CCWWGG 1 cut(s) 1863
Bst2BI CACGAG 3 cut(s) 879, 915, 1551
Bst2UI CCWGG 3 cut(s) 1112, 1263, 1641
Bst6I CTCTTC 7 cut(s) 165, 531, 745, 806, 1169, 1281, 1847
BstACI GRCGYC 2 cut(s) 873, 1772
BstAPI GCANNNNNTGC 1 cut(s) 434
BstAUI TGTACA 1 cut(s) 1005
BstBI TTCGAA 3 cut(s) 515, 718, 2057
BstC8I GCNNGC 6 cut(s) 112, 309, 453, 1732, 1736, 2046
BstDEI CTNAG 5 cut(s) 338, 458, 725, 1428, 1497
BstDSI CCRYGG 2 cut(s) 1440, 1863
BstEII GGTNACC 1 cut(s) 1858
BstF5I GGATG 4 cut(s) 539, 910, 1764, 1821
BstFNI CGCG 1 cut(s) 92
BstHHI GCGC 1 cut(s) 1550
BstMAI GTCTC 2 cut(s) 902, 2012
BstMWI GCNNNNNNNGC 5 cut(s) 434, 1288, 1613, 1622, 1671
BstNI CCWGG 3 cut(s) 1112, 1263, 1641
BstNSI RCATGY 1 cut(s) 437
BstPI GGTNACC 1 cut(s) 1858
BstSCI CCNGG 3 cut(s) 1110, 1261, 1639
BstSFI CTRYAG 2 cut(s) 171, 1376
BstSLI GKGCMC 1 cut(s) 1256
BstUI CGCG 1 cut(s) 92
BstV1I GCAGC 2 cut(s) 284, 412
BstV2I GAAGAC 3 cut(s) 524, 1362, 1693
BstX2I RGATCY 2 cut(s) 1488, 1500
BstYI RGATCY 2 cut(s) 1488, 1500
BsuI GTATCC 1 cut(s) 372
BsuRI GGCC 7 cut(s) 259, 1115, 1595, 1607, 1871, 1994, 2015
BtgI CCRYGG 2 cut(s) 1440, 1863
BtsCI GGATG 4 cut(s) 539, 910, 1764, 1821
BtsIMutI CAGTG 4 cut(s) 661, 974, 1136, 1967
BtuMI TCGCGA 1 cut(s) 92
Cac8I GCNNGC 6 cut(s) 112, 309, 453, 1732, 1736, 2046
CciI TCATGA 3 cut(s) 163, 640, 1387
CfoI GCGC 1 cut(s) 1550
Cfr13I GGNCC 2 cut(s) 1265, 1569
CseI GACGC 1 cut(s) 1724
Csp6I GTAC 5 cut(s) 188, 411, 783, 1006, 1513
CviQI GTAC 5 cut(s) 188, 411, 783, 1006, 1513
DdeI CTNAG 5 cut(s) 338, 458, 725, 1428, 1497
DrdI GACNNNNNNGTC 1 cut(s) 1576
DseDI GACNNNNNNGTC 1 cut(s) 1576
EaeI YGGCCR 3 cut(s) 1113, 1593, 1605
Eam1104I CTCTTC 7 cut(s) 165, 531, 745, 806, 1169, 1281, 1847
EarI CTCTTC 7 cut(s) 165, 531, 745, 806, 1169, 1281, 1847
Ecl136II GAGCTC 1 cut(s) 1786
Eco130I CCWWGG 1 cut(s) 1863
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 1 cut(s) 1788
Eco47I GGWCC 2 cut(s) 1265, 1569
Eco53kI GAGCTC 1 cut(s) 1786
Eco57I CTGAAG 5 cut(s) 534, 726, 1061, 1491, 1583
Eco88I CYCGRG 3 cut(s) 1350, 1787, 2009
Eco91I GGTNACC 1 cut(s) 1858
EcoICRI GAGCTC 1 cut(s) 1786
EcoO65I GGTNACC 1 cut(s) 1858
EcoRI GAATTC 2 cut(s) 440, 720
EcoRII CCWGG 3 cut(s) 1110, 1261, 1639
EcoT14I CCWWGG 1 cut(s) 1863
EcoT22I ATGCAT 1 cut(s) 15
EcoT38I GRGCYC 1 cut(s) 1788
ErhI CCWWGG 1 cut(s) 1863
FaqI GGGAC 3 cut(s) 884, 911, 1622
FauNDI CATATG 2 cut(s) 60, 613
FbaI TGATCA 1 cut(s) 1917
FblI GTMKAC 2 cut(s) 1236, 1932
Fnu4HI GCNGC 4 cut(s) 273, 426, 1068, 1626
FokI GGATG 4 cut(s) 526, 917, 1751, 1808
FriOI GRGCYC 1 cut(s) 1788
Fsp4HI GCNGC 4 cut(s) 273, 426, 1068, 1626
FspBI CTAG 3 cut(s) 308, 1170, 1727
GlaI GCGC 1 cut(s) 1549
GluI GCNGC 4 cut(s) 273, 426, 1068, 1626
GsaI CCCAGC 1 cut(s) 1261
GsuI CTGGAG 1 cut(s) 1662
HaeIII GGCC 7 cut(s) 259, 1115, 1595, 1607, 1871, 1994, 2015
HapII CCGG 1 cut(s) 1596
HgaI GACGC 1 cut(s) 1724
HhaI GCGC 1 cut(s) 1550
Hin1I GRCGYC 2 cut(s) 873, 1772
Hin6I GCGC 1 cut(s) 1548
HinP1I GCGC 1 cut(s) 1548
HpaII CCGG 1 cut(s) 1596
HphI GGTGA 7 cut(s) 521, 1321, 1624, 1702, 1767, 1825, 1870
Hpy166II GTNNAC 4 cut(s) 188, 1060, 1237, 1933
Hpy8I GTNNAC 4 cut(s) 188, 1060, 1237, 1933
Hpy99I CGWCG 7 cut(s) 47, 806, 1524, 1591, 1616, 1655, 1718
HpyCH4IV ACGT 3 cut(s) 873, 1233, 1772
HpyF10VI GCNNNNNNNGC 5 cut(s) 434, 1288, 1613, 1622, 1671
HpyF3I CTNAG 5 cut(s) 338, 458, 725, 1428, 1497
HpySE526I ACGT 3 cut(s) 873, 1233, 1772
Hsp92I GRCGYC 2 cut(s) 873, 1772
HspAI GCGC 1 cut(s) 1548
Ksp22I TGATCA 1 cut(s) 1917
LguI GCTCTTC 2 cut(s) 165, 1281
LmnI GCTCC 3 cut(s) 121, 359, 613
Lsp1109I GCAGC 2 cut(s) 284, 412
LweI GCATC 3 cut(s) 610, 667, 1878
MaeI CTAG 3 cut(s) 308, 1170, 1727
MaeII ACGT 3 cut(s) 873, 1233, 1772
MaeIII GTNAC 3 cut(s) 874, 1773, 1858
MfeI CAATTG 2 cut(s) 891, 1277
MflI RGATCY 2 cut(s) 1488, 1500
MhlI GDGCHC 5 cut(s) 610, 1256, 1351, 1586, 1788
MlsI TGGCCA 2 cut(s) 1115, 1607
MluNI TGGCCA 2 cut(s) 1115, 1607
MlyI GAGTC 6 cut(s) 351, 514, 741, 1586, 2014, 2044
MmeI TCCRAC 1 cut(s) 1822
Mox20I TGGCCA 2 cut(s) 1115, 1607
Mph1103I ATGCAT 1 cut(s) 15
MroXI GAANNNNTTC 1 cut(s) 1205
MscI TGGCCA 2 cut(s) 1115, 1607
MseI TTAA 2 cut(s) 747, 1319
MslI CAYNNNNRTG 3 cut(s) 1439, 1555, 1886
Msp20I TGGCCA 2 cut(s) 1115, 1607
MspI CCGG 1 cut(s) 1596
MspR9I CCNGG 3 cut(s) 1112, 1263, 1641
MunI CAATTG 2 cut(s) 891, 1277
Mva1269I GAATGC 1 cut(s) 554
MvaI CCWGG 3 cut(s) 1112, 1263, 1641
MvnI CGCG 1 cut(s) 92
MwoI GCNNNNNNNGC 5 cut(s) 434, 1288, 1613, 1622, 1671
NcoI CCATGG 1 cut(s) 1863
NdeI CATATG 2 cut(s) 60, 613
NheI GCTAGC 1 cut(s) 307
NlaIV GGNNCC 2 cut(s) 219, 1255
NmeAIII GCCGAG 1 cut(s) 1806
NmuCI GTSAC 3 cut(s) 874, 1773, 1858
NruI TCGCGA 1 cut(s) 92
NsiI ATGCAT 1 cut(s) 15
NspI RCATGY 1 cut(s) 437
NspV TTCGAA 3 cut(s) 515, 718, 2057
PaeR7I CTCGAG 2 cut(s) 1787, 2009
PagI TCATGA 3 cut(s) 163, 640, 1387
PceI AGGCCT 1 cut(s) 259
PciSI GCTCTTC 2 cut(s) 165, 1281
PcsI WCGNNNNNNNCGW 1 cut(s) 1710
PctI GAATGC 1 cut(s) 554
PdmI GAANNNNTTC 1 cut(s) 1205
PfeI GAWTC 5 cut(s) 99, 844, 938, 1048, 1405
PkrI GCNGC 4 cut(s) 274, 427, 1069, 1627
PleI GAGTC 6 cut(s) 350, 514, 740, 1585, 2013, 2044
PpsI GAGTC 6 cut(s) 350, 514, 740, 1585, 2013, 2044
Psp124BI GAGCTC 1 cut(s) 1788
Psp6I CCWGG 3 cut(s) 1110, 1261, 1639
PspEI GGTNACC 1 cut(s) 1858
PspFI CCCAGC 1 cut(s) 1257
PspGI CCWGG 3 cut(s) 1110, 1261, 1639
PspN4I GGNNCC 2 cut(s) 219, 1255
PspPI GGNCC 2 cut(s) 1265, 1569
PspXI VCTCGAGB 1 cut(s) 1787
PsuI RGATCY 2 cut(s) 1488, 1500
RruI TCGCGA 1 cut(s) 92
RsaI GTAC 5 cut(s) 189, 412, 784, 1007, 1514
RsaNI GTAC 5 cut(s) 188, 411, 783, 1006, 1513
RseI CAYNNNNRTG 3 cut(s) 1439, 1555, 1886
SacI GAGCTC 1 cut(s) 1788
SapI GCTCTTC 2 cut(s) 165, 1281
SaqAI TTAA 2 cut(s) 747, 1319
SatI GCNGC 4 cut(s) 273, 426, 1068, 1626
Sau96I GGNCC 2 cut(s) 1265, 1569
ScaI AGTACT 1 cut(s) 1514
SchI GAGTC 6 cut(s) 351, 514, 741, 1586, 2014, 2044
ScrFI CCNGG 3 cut(s) 1112, 1263, 1641
SduI GDGCHC 5 cut(s) 610, 1256, 1351, 1586, 1788
SfaNI GCATC 3 cut(s) 610, 667, 1878
SfcI CTRYAG 2 cut(s) 171, 1376
Sfr274I CTCGAG 2 cut(s) 1787, 2009
SfuI TTCGAA 3 cut(s) 515, 718, 2057
SinI GGWCC 2 cut(s) 1265, 1569
SlaI CTCGAG 2 cut(s) 1787, 2009
SmiMI CAYNNNNRTG 3 cut(s) 1439, 1555, 1886
SmlI CTYRAG 2 cut(s) 1787, 2009
SmoI CTYRAG 2 cut(s) 1787, 2009
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 5 cut(s) 1067, 1535, 1567, 1626, 2064
SspI AATATT 1 cut(s) 1029
SspMI CTAG 3 cut(s) 308, 1170, 1727
SstI GAGCTC 1 cut(s) 1788
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 3 cut(s) 1110, 1261, 1639
StyI CCWWGG 1 cut(s) 1863
TaiI ACGT 3 cut(s) 876, 1236, 1775
TaqII GACCGA 1 cut(s) 305
TatI WGTACW 2 cut(s) 1005, 1512
TauI GCSGC 2 cut(s) 1070, 1628
TfiI GAWTC 5 cut(s) 99, 844, 938, 1048, 1405
Tru1I TTAA 2 cut(s) 747, 1319
Tru9I TTAA 2 cut(s) 747, 1319
TscAI CASTG 4 cut(s) 661, 981, 1136, 1974
TseFI GTSAC 3 cut(s) 874, 1773, 1858
TseI GCWGC 2 cut(s) 272, 425
Tsp45I GTSAC 3 cut(s) 874, 1773, 1858
TspGWI ACGGA 2 cut(s) 1179, 1334
TspRI CASTG 4 cut(s) 661, 981, 1136, 1974
VpaK11BI GGWCC 2 cut(s) 1265, 1569
XapI RAATTY 9 cut(s) 294, 440, 511, 649, 691, 720, 1035, 1340, 1923
XceI RCATGY 1 cut(s) 437
XhoI CTCGAG 2 cut(s) 1787, 2009
XmiI GTMKAC 2 cut(s) 1236, 1932
XmnI GAANNNNTTC 1 cut(s) 1205
XspI CTAG 3 cut(s) 308, 1170, 1727
ZraI GACGTC 2 cut(s) 874, 1773
ZrmI AGTACT 1 cut(s) 1514
Zsp2I ATGCAT 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.