Prupe.7G089200_v2.0.a1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000724
Physical Location & Seq
Forward (+)
12275777 .. 12279195
3419 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G089200.1

Sequence Viewer

Length: 1980 bp
ATGGAGTTGATAGACGAGGCTTCAACAGGAGAAGCACTTAGTCACTCGAGAAAGCAATATGAATTGGCCATGAACGGCCAGTGGGAAAGCCTAAAACGATTCTACAAGGGTCGTGAGTTTGAAGTACTTGGGCAAATGACAACGAAGAACGACACTGTACTTCACGTGGCAGGCTTGGCTGGACGCAAAGACGTGCTTGTATTTTTGATTTCACTGATAGAAGAAGACAGGGATGCGTTGATAGTGGAGAACAACCGCGGCAACACCCCGCTTCATGAGGTAGCTGCGTCCGGAAATTTTGACTCAGCAAAGCTGTTGGTGGAGTATAATGGTGCTTTGGTGGAGATTAGGAACCACTTAGGAGAAACCCCACTCTACCGGGCTGCTGCTTTTGGTCACACAGACTTGGTTCAATATTTGGCTACCCAAGTAGACGGCGATATAAAGCAGCACTTCCATAGAAATGATAAAGTATCCATTCTTCATATGGCAGTACTTGGCCAACATTTTGAAACTGCTCATTGGTTAGTAACGGAGTACCCATATCTTGCGAATGGAAAGGAAGAGAATGGACTCACAAGTCTTCAATTGCTAGCCCAAATGCCGTCTGCCTTCAAACTCAAATTTCGCGAAAGCATTTGGATTAAGCTGCACCGTCATATATGCCTTTGTAATGATGATAACATTGATCGAGACCCAGCGAATCAAAACGATGACTTGGAGAGCGGATTTAATCATCCTTCCCAATCTACTTTTTCAAACGATGACTTGGAGAGCGGGTCGACAAGAACGATCAGAAGGACTACCATACGATGGGCACCAATCTGTATTATGGGCGAGGAAATGCGAAATCAAAACGTACTATTGGAACTCACTGAATTGCTCGTCCGGAAGGACTATTCATGGGCGAAAATTGAACCAACCGAAGTAGTCAATTCATTTTCTCTGGTGTCAAAACCAAATAGTCCACAGAAAAAAGAAGATGCTGAAACCAAATCTACTTATGAGTATATTCCATTGTTTATAGCAACTAGAACTGGAATATCACAAATTGTAGAAAAGATTTTGGAGCTTCATCCTCAAGCAGTTGAGGCGCACGATATCAAGCATCAACAAAACATTTTGCACATGGCCATCAAGTATCGTCGGTTGGCCATCTTTAATATTGTAAAGAAGAACAAATTCATAACCTCAAGGCTGGCTGACGTGATTGATAACGATGGGAACACCATATTGCACCACGCTGCAGATATGAGCTATTACACAGATATGAGCTTTTACTCTGTGGACGCTAAAGCTACATATGGTCCTGCATTTCAGTTGCAAGAAGAATTGCATTGGATGGCGCGTGTGCAAAAGATAATCCCAGTTAATTACGCCATGCACCGCAACAAGGAGGGTGTGACAGCGAATGAGCTCTTTACTAGGCAGCATGCAGAGCTTCTTCAGTCAGCAAAAGTATGGATGAAAGAAACTGCTCAGTCAGGCTCGGTCGTGGCGGCTTTGGTGGCCACCGTGGCCTATGCAGCTGTGTACACGGTTCCCGGGGGTACTAATCAGAACGGGCTTCCTAATCTCCGGCACTCTCCTTTCTTCAAAGCATTCACCATTTCGAACACTGTCTCGCTTGTCTTCTCATTGACTTCTTTGGGCACGTTTCTCAATATCACGAGGTCTCCATTTGAGTACAAAAACTTTTACCATTCTCTTCCCTTCAAGCTGAATTTAGGGTTTCTCCTTCTCTTCTGCTCGCTGCTAGTGTCCATGCTCACCTTCGCTGCTACTATTGTGCTCTTGATTCATCATCAGAAGATATGGTCAATTTCCCTTATTTACGTTGTTGTTGCCATTCTTCCTTTCTCTATGTTTGGGCTCAACCATAATCGTTTTTATGACGTATTTTTCAAAGGTTTGAAAGACATTAAAAAGAAACTTAGGTGCTGTAAGAGGATGTACGTTAGAATAAGAATGCAGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4 PGG

Protein Analysis

660

Amino Acids

75.15

Weight (kDa)

8.06

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 579
AccB1I GGYRCC 1 cut(s) 817
AccB7I CCANNNNNTGG 1 cut(s) 813
AccBSI CCGCTC 2 cut(s) 726, 777
AccI GTMKAC 2 cut(s) 432, 782
AccII CGCG 3 cut(s) 258, 630, 1348
AccIII TCCGGA 2 cut(s) 290, 888
AciI CCGC 7 cut(s) 256, 258, 269, 726, 777, 1387, 1499
AcoI YGGCCR 6 cut(s) 66, 76, 499, 1131, 1152, 1509
AcsI RAATTY 4 cut(s) 295, 623, 1181, 1723
AcuI CTGAAG 1 cut(s) 1430
AcvI CACGTG 1 cut(s) 166
AfaI GTAC 9 cut(s) 126, 159, 495, 539, 861, 1535, 1552, 1688, 1955
AfiI CCNNNNNNNGG 2 cut(s) 813, 1393
AjiI CACGTC 2 cut(s) 193, 1207
Alw21I GWGCWC 2 cut(s) 1419, 1794
Alw26I GTCTC 3 cut(s) 687, 1627, 1680
Ama87I CYCGRG 2 cut(s) 46, 1544
Aor13HI TCCGGA 2 cut(s) 290, 888
AoxI GGCC 7 cut(s) 66, 76, 499, 1131, 1152, 1509, 1518
ApoI RAATTY 4 cut(s) 295, 623, 1181, 1723
Asp700I GAANNNNTTC 1 cut(s) 1181
AspLEI GCGC 2 cut(s) 1096, 1348
AspS9I GGNCC 1 cut(s) 1307
AsuC2I CCSGG 3 cut(s) 380, 1545, 1546
AsuHPI GGTGA 2 cut(s) 1597, 1762
AsuII TTCGAA 1 cut(s) 1613
AsuNHI GCTAGC 1 cut(s) 592
AvaI CYCGRG 2 cut(s) 46, 1544
AvaII GGWCC 1 cut(s) 1307
BaeGI GKGCMC 2 cut(s) 820, 1655
BalI TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
BanI GGYRCC 1 cut(s) 817
BanII GRGCYC 2 cut(s) 1419, 1875
BarI GAAGNNNNNNTAC 2 cut(s) 465, 497
BauI CACGAG 1 cut(s) 1669
BbrPI CACGTG 1 cut(s) 166
BbsI GAAGAC 3 cut(s) 231, 575, 1624
Bbv12I GWGCWC 2 cut(s) 1419, 1794
BccI CCATC 5 cut(s) 807, 1142, 1163, 1214, 1336
BceAI ACGGC 3 cut(s) 91, 451, 589
BciVI GTATCC 1 cut(s) 484
BcnI CCSGG 3 cut(s) 380, 1545, 1546
BcoDI GTCTC 3 cut(s) 687, 1627, 1680
BfaI CTAG 4 cut(s) 593, 1032, 1425, 1757
BfmI CTRYAG 1 cut(s) 1245
BfuI GTATCC 1 cut(s) 484
BglI GCCNNNNNGGC 1 cut(s) 1517
BmcAI AGTACT 2 cut(s) 126, 495
Bme1390I CCNGG 3 cut(s) 380, 1545, 1546
Bme18I GGWCC 1 cut(s) 1307
BmeT110I CYCGRG 2 cut(s) 46, 1544
BmgBI CACGTC 2 cut(s) 193, 1207
BmgT120I GGNCC 1 cut(s) 1307
BmiI GGNNCC 3 cut(s) 353, 819, 1542
BmrFI CCNGG 3 cut(s) 380, 1545, 1546
BmrI ACTGGG 1 cut(s) 1361
BmsI GCATC 3 cut(s) 223, 973, 1117
BmtI GCTAGC 1 cut(s) 596
BmuI ACTGGG 1 cut(s) 1361
BpiI GAAGAC 3 cut(s) 231, 575, 1624
Bpu14I TTCGAA 1 cut(s) 1613
BpuEI CTTGAG 2 cut(s) 1065, 1177
BpuMI CCSGG 3 cut(s) 380, 1545, 1546
BsaAI YACGTR 1 cut(s) 166
BsaI GGTCTC 2 cut(s) 687, 1680
BsaJI CCNNGG 4 cut(s) 256, 1515, 1544, 1545
BsaWI WCCGGW 2 cut(s) 290, 888
BsaXI ACNNNNNCTCC 4 cut(s) 764, 794, 1660, 1690
Bsc4I CCNNNNNNNGG 2 cut(s) 813, 1393
Bse1I ACTGG 3 cut(s) 79, 1042, 1367
BseAI TCCGGA 2 cut(s) 290, 888
BseDI CCNNGG 4 cut(s) 256, 1515, 1544, 1545
BseGI GGATG 6 cut(s) 238, 736, 1075, 1347, 1470, 1956
BseLI CCNNNNNNNGG 2 cut(s) 813, 1393
BseMII CTCAG 2 cut(s) 318, 1493
BseNI ACTGG 3 cut(s) 79, 1042, 1367
BseSI GKGCMC 2 cut(s) 820, 1655
BseYI CCCAGC 1 cut(s) 697
BsgI GTGCAG 1 cut(s) 635
Bsh1236I CGCG 3 cut(s) 258, 630, 1348
Bsh1285I CGRYCG 1 cut(s) 1494
BshFI GGCC 7 cut(s) 68, 78, 501, 1133, 1154, 1511, 1520
BshNI GGYRCC 1 cut(s) 817
BsiEI CGRYCG 1 cut(s) 1494
BsiHKAI GWGCWC 2 cut(s) 1419, 1794
BsiHKCI CYCGRG 2 cut(s) 46, 1544
BsiSI CCGG 5 cut(s) 291, 379, 889, 1545, 1579
BslI CCNNNNNNNGG 2 cut(s) 813, 1393
BsmAI GTCTC 3 cut(s) 687, 1627, 1680
BsmI GAATGC 2 cut(s) 1601, 1974
BsnI GGCC 7 cut(s) 68, 78, 501, 1133, 1154, 1511, 1520
Bso31I GGTCTC 2 cut(s) 687, 1680
BsoBI CYCGRG 2 cut(s) 46, 1544
Bsp119I TTCGAA 1 cut(s) 1613
Bsp1286I GDGCHC 5 cut(s) 820, 1419, 1655, 1794, 1875
Bsp13I TCCGGA 2 cut(s) 290, 888
Bsp1407I TGTACA 1 cut(s) 1533
Bsp143I GATC 2 cut(s) 688, 792
Bsp68I TCGCGA 1 cut(s) 630
BspACI CCGC 7 cut(s) 256, 258, 269, 726, 777, 1387, 1499
BspANI GGCC 7 cut(s) 68, 78, 501, 1133, 1154, 1511, 1520
BspCNI CTCAG 2 cut(s) 317, 1492
BspEI TCCGGA 2 cut(s) 290, 888
BspFNI CGCG 3 cut(s) 258, 630, 1348
BspHI TCATGA 1 cut(s) 274
BspLI GGNNCC 3 cut(s) 353, 819, 1542
BspMAI CTGCAG 1 cut(s) 1249
BspOI GCTAGC 1 cut(s) 596
BspT104I TTCGAA 1 cut(s) 1613
BspT107I GGYRCC 1 cut(s) 817
BspTNI GGTCTC 2 cut(s) 687, 1680
BsrBI CCGCTC 2 cut(s) 726, 777
BsrGI TGTACA 1 cut(s) 1533
BsrI ACTGG 3 cut(s) 79, 1042, 1367
BssECI CCNNGG 4 cut(s) 256, 1515, 1544, 1545
BssMI GATC 2 cut(s) 688, 792
BssSI CACGAG 1 cut(s) 1669
Bst2BI CACGAG 1 cut(s) 1669
Bst4CI ACNGT 5 cut(s) 157, 656, 1516, 1540, 1621
Bst6I CTCTTC 3 cut(s) 558, 1713, 1748
BstAUI TGTACA 1 cut(s) 1533
BstBAI YACGTR 1 cut(s) 166
BstBI TTCGAA 1 cut(s) 1613
BstC8I GCNNGC 5 cut(s) 172, 594, 1200, 1434, 1751
BstDEI CTNAG 5 cut(s) 38, 304, 358, 1479, 1934
BstDSI CCRYGG 2 cut(s) 256, 1515
BstF5I GGATG 6 cut(s) 238, 736, 1075, 1347, 1470, 1956
BstFNI CGCG 3 cut(s) 258, 630, 1348
BstHHI GCGC 2 cut(s) 1096, 1348
BstKTI GATC 2 cut(s) 691, 795
BstMAI GTCTC 3 cut(s) 687, 1627, 1680
BstMBI GATC 2 cut(s) 688, 792
BstMCI CGRYCG 1 cut(s) 1494
BstMWI GCNNNNNNNGC 6 cut(s) 176, 1091, 1438, 1508, 1517, 1526
BstNSI RCATGY 1 cut(s) 1436
BstSCI CCNGG 3 cut(s) 378, 1543, 1544
BstSFI CTRYAG 1 cut(s) 1245
BstSLI GKGCMC 2 cut(s) 820, 1655
BstUI CGCG 3 cut(s) 258, 630, 1348
BstV2I GAAGAC 3 cut(s) 231, 575, 1624
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 7 cut(s) 68, 78, 501, 1133, 1154, 1511, 1520
BtgI CCRYGG 2 cut(s) 256, 1515
BtrI CACGTC 2 cut(s) 193, 1207
BtsCI GGATG 6 cut(s) 238, 736, 1075, 1347, 1470, 1956
BtsIMutI CAGTG 5 cut(s) 86, 153, 212, 873, 1617
BtuMI TCGCGA 1 cut(s) 630
Cac8I GCNNGC 5 cut(s) 172, 594, 1200, 1434, 1751
CciI TCATGA 1 cut(s) 274
CfoI GCGC 2 cut(s) 1096, 1348
Cfr13I GGNCC 1 cut(s) 1307
Cfr42I CCGCGG 1 cut(s) 259
Cfr9I CCCGGG 1 cut(s) 1544
CseI GACGC 3 cut(s) 192, 276, 1298
Csp6I GTAC 9 cut(s) 125, 158, 494, 538, 860, 1534, 1551, 1687, 1954
CviAII CATG 7 cut(s) 70, 275, 903, 1129, 1381, 1433, 1765
CviQI GTAC 9 cut(s) 125, 158, 494, 538, 860, 1534, 1551, 1687, 1954
DdeI CTNAG 5 cut(s) 38, 304, 358, 1479, 1934
DpnI GATC 2 cut(s) 690, 794
DpnII GATC 2 cut(s) 688, 792
DrdI GACNNNNNNGTC 1 cut(s) 579
DseDI GACNNNNNNGTC 1 cut(s) 579
EaeI YGGCCR 6 cut(s) 66, 76, 499, 1131, 1152, 1509
Eam1104I CTCTTC 3 cut(s) 558, 1713, 1748
EarI CTCTTC 3 cut(s) 558, 1713, 1748
Ecl136II GAGCTC 1 cut(s) 1417
Eco24I GRGCYC 2 cut(s) 1419, 1875
Eco31I GGTCTC 2 cut(s) 687, 1680
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 1 cut(s) 1307
Eco53kI GAGCTC 1 cut(s) 1417
Eco57I CTGAAG 1 cut(s) 1430
Eco72I CACGTG 1 cut(s) 166
Eco88I CYCGRG 2 cut(s) 46, 1544
EcoICRI GAGCTC 1 cut(s) 1417
EcoRV GATATC 1 cut(s) 1102
EcoT38I GRGCYC 2 cut(s) 1419, 1875
FaeI CATG 7 cut(s) 73, 278, 906, 1132, 1384, 1436, 1768
FalI AAGNNNNNCTT 4 cut(s) 180, 212, 437, 469
FatI CATG 7 cut(s) 69, 274, 902, 1128, 1380, 1432, 1764
FauI CCCGC 2 cut(s) 276, 770
FauNDI CATATG 2 cut(s) 486, 1303
FblI GTMKAC 2 cut(s) 432, 782
FokI GGATG 6 cut(s) 245, 723, 1062, 1354, 1477, 1963
FriOI GRGCYC 2 cut(s) 1419, 1875
FspBI CTAG 4 cut(s) 593, 1032, 1425, 1757
GlaI GCGC 2 cut(s) 1095, 1347
GsaI CCCAGC 1 cut(s) 701
HaeIII GGCC 7 cut(s) 68, 78, 501, 1133, 1154, 1511, 1520
HapII CCGG 5 cut(s) 291, 379, 889, 1545, 1579
HgaI GACGC 3 cut(s) 192, 276, 1298
HhaI GCGC 2 cut(s) 1096, 1348
Hin1II CATG 7 cut(s) 73, 278, 906, 1132, 1384, 1436, 1768
Hin6I GCGC 2 cut(s) 1094, 1346
HinP1I GCGC 2 cut(s) 1094, 1346
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HinfI GANTC 5 cut(s) 99, 302, 573, 703, 1798
HpaII CCGG 5 cut(s) 291, 379, 889, 1545, 1579
HphI GGTGA 2 cut(s) 1597, 1762
Hpy166II GTNNAC 6 cut(s) 433, 783, 968, 1288, 1534, 1536
Hpy188I TCNGA 3 cut(s) 797, 1560, 1809
Hpy188III TCNNGA 9 cut(s) 48, 113, 275, 291, 629, 692, 889, 1669, 1795
Hpy8I GTNNAC 6 cut(s) 433, 783, 968, 1288, 1534, 1536
Hpy99I CGWCG 1 cut(s) 1149
HpyAV CCTTC 7 cut(s) 622, 750, 792, 886, 1723, 1748, 1783
HpyCH4III ACNGT 5 cut(s) 157, 656, 1516, 1540, 1621
HpyCH4IV ACGT 8 cut(s) 165, 192, 858, 1206, 1655, 1836, 1896, 1956
HpyF10VI GCNNNNNNNGC 6 cut(s) 176, 1091, 1438, 1508, 1517, 1526
HpyF3I CTNAG 5 cut(s) 38, 304, 358, 1479, 1934
HpySE526I ACGT 8 cut(s) 165, 192, 858, 1206, 1655, 1836, 1896, 1956
Hsp92II CATG 7 cut(s) 73, 278, 906, 1132, 1384, 1436, 1768
HspAI GCGC 2 cut(s) 1094, 1346
Kpn2I TCCGGA 2 cut(s) 290, 888
KspI CCGCGG 1 cut(s) 259
Kzo9I GATC 2 cut(s) 688, 792
LmnI GCTCC 1 cut(s) 1069
LweI GCATC 3 cut(s) 223, 973, 1117
MaeI CTAG 4 cut(s) 593, 1032, 1425, 1757
MaeII ACGT 8 cut(s) 165, 192, 858, 1206, 1655, 1836, 1896, 1956
MaeIII GTNAC 4 cut(s) 41, 395, 529, 1402
MalI GATC 2 cut(s) 690, 794
MbiI CCGCTC 2 cut(s) 726, 777
MboI GATC 2 cut(s) 688, 792
MfeI CAATTG 1 cut(s) 587
MhlI GDGCHC 5 cut(s) 820, 1419, 1655, 1794, 1875
MlsI TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
MluNI TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
MlyI GAGTC 2 cut(s) 296, 567
MnlI CCTC 9 cut(s) 10, 271, 832, 1084, 1089, 1201, 1390, 1665, 1941
Mox20I TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
MroI TCCGGA 2 cut(s) 290, 888
MroXI GAANNNNTTC 1 cut(s) 1181
MscI TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
MseI TTAA 5 cut(s) 645, 732, 1161, 1371, 1923
MslI CAYNNNNRTG 2 cut(s) 462, 1268
Msp20I TGGCCA 5 cut(s) 68, 501, 1133, 1154, 1511
MspA1I CMGCKG 2 cut(s) 258, 1529
MspI CCGG 5 cut(s) 291, 379, 889, 1545, 1579
MspR9I CCNGG 3 cut(s) 380, 1545, 1546
MunI CAATTG 1 cut(s) 587
Mva1269I GAATGC 2 cut(s) 1601, 1974
MvnI CGCG 3 cut(s) 258, 630, 1348
MwoI GCNNNNNNNGC 6 cut(s) 176, 1091, 1438, 1508, 1517, 1526
NciI CCSGG 3 cut(s) 380, 1545, 1546
NdeI CATATG 2 cut(s) 486, 1303
NdeII GATC 2 cut(s) 688, 792
NheI GCTAGC 1 cut(s) 592
NlaIII CATG 7 cut(s) 73, 278, 906, 1132, 1384, 1436, 1768
NlaIV GGNNCC 3 cut(s) 353, 819, 1542
NmuCI GTSAC 3 cut(s) 41, 395, 1402
NruI TCGCGA 1 cut(s) 630
NspI RCATGY 1 cut(s) 1436
NspV TTCGAA 1 cut(s) 1613
PaeI GCATGC 1 cut(s) 1436
PaeR7I CTCGAG 1 cut(s) 46
PagI TCATGA 1 cut(s) 274
PcsI WCGNNNNNNNCGW 1 cut(s) 788
PctI GAATGC 2 cut(s) 1601, 1974
PdmI GAANNNNTTC 1 cut(s) 1181
PfeI GAWTC 3 cut(s) 99, 703, 1798
PflMI CCANNNNNTGG 1 cut(s) 813
PleI GAGTC 2 cut(s) 296, 567
PmaCI CACGTG 1 cut(s) 166
PmlI CACGTG 1 cut(s) 166
PpsI GAGTC 2 cut(s) 296, 567
Ppu21I YACGTR 1 cut(s) 166
Psp124BI GAGCTC 1 cut(s) 1419
PspCI CACGTG 1 cut(s) 166
PspFI CCCAGC 1 cut(s) 697
PspN4I GGNNCC 3 cut(s) 353, 819, 1542
PspPI GGNCC 1 cut(s) 1307
PstI CTGCAG 1 cut(s) 1249
PvuII CAGCTG 1 cut(s) 1529
RruI TCGCGA 1 cut(s) 630
RsaI GTAC 9 cut(s) 126, 159, 495, 539, 861, 1535, 1552, 1688, 1955
RsaNI GTAC 9 cut(s) 125, 158, 494, 538, 860, 1534, 1551, 1687, 1954
RseI CAYNNNNRTG 2 cut(s) 462, 1268
SacI GAGCTC 1 cut(s) 1419
SacII CCGCGG 1 cut(s) 259
SalI GTCGAC 1 cut(s) 781
SaqAI TTAA 5 cut(s) 645, 732, 1161, 1371, 1923
Sau3AI GATC 2 cut(s) 688, 792
Sau96I GGNCC 1 cut(s) 1307
ScaI AGTACT 2 cut(s) 126, 495
SchI GAGTC 2 cut(s) 296, 567
ScrFI CCNGG 3 cut(s) 380, 1545, 1546
SduI GDGCHC 5 cut(s) 820, 1419, 1655, 1794, 1875
SfaNI GCATC 3 cut(s) 223, 973, 1117
SfcI CTRYAG 1 cut(s) 1245
SfiI GGCCNNNNNGGCC 1 cut(s) 1517
Sfr274I CTCGAG 1 cut(s) 46
Sfr303I CCGCGG 1 cut(s) 259
SfuI TTCGAA 1 cut(s) 1613
SgrBI CCGCGG 1 cut(s) 259
SinI GGWCC 1 cut(s) 1307
SlaI CTCGAG 1 cut(s) 46
SmaI CCCGGG 1 cut(s) 1546
SmiMI CAYNNNNRTG 2 cut(s) 462, 1268
SmlI CTYRAG 3 cut(s) 46, 1080, 1192
SmoI CTYRAG 3 cut(s) 46, 1080, 1192
SphI GCATGC 1 cut(s) 1436
SsiI CCGC 7 cut(s) 256, 258, 269, 726, 777, 1387, 1499
SspI AATATT 2 cut(s) 416, 1165
SspMI CTAG 4 cut(s) 593, 1032, 1425, 1757
SstI GAGCTC 1 cut(s) 1419
StyD4I CCNGG 3 cut(s) 378, 1543, 1544
TaaI ACNGT 5 cut(s) 157, 656, 1516, 1540, 1621
TaiI ACGT 8 cut(s) 168, 195, 861, 1209, 1658, 1839, 1899, 1959
TaqI TCGA 4 cut(s) 47, 691, 782, 1613
TaqII GACCGA 1 cut(s) 1480
TatI WGTACW 5 cut(s) 124, 157, 493, 1533, 1686
TauI GCSGC 2 cut(s) 261, 1502
TfiI GAWTC 3 cut(s) 99, 703, 1798
Tru1I TTAA 5 cut(s) 645, 732, 1161, 1371, 1923
Tru9I TTAA 5 cut(s) 645, 732, 1161, 1371, 1923
TscAI CASTG 5 cut(s) 86, 160, 219, 880, 1624
TseFI GTSAC 3 cut(s) 41, 395, 1402
Tsp45I GTSAC 3 cut(s) 41, 395, 1402
TspGWI ACGGA 1 cut(s) 548
TspMI CCCGGG 1 cut(s) 1544
TspRI CASTG 5 cut(s) 86, 160, 219, 880, 1624
Van91I CCANNNNNTGG 1 cut(s) 813
VpaK11BI GGWCC 1 cut(s) 1307
XapI RAATTY 4 cut(s) 295, 623, 1181, 1723
XceI RCATGY 1 cut(s) 1436
XcmI CCANNNNNNNNNTGG 1 cut(s) 484
XhoI CTCGAG 1 cut(s) 46
XmaI CCCGGG 1 cut(s) 1544
XmiI GTMKAC 2 cut(s) 432, 782
XmnI GAANNNNTTC 1 cut(s) 1181
XspI CTAG 4 cut(s) 593, 1032, 1425, 1757
ZrmI AGTACT 2 cut(s) 126, 495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.