FvH4_3g01340

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000724
Physical Location & Seq
Forward (+)
680048 .. 684595
4548 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01340.t1

Sequence Viewer

Length: 2076 bp
ATGGAAGAAATACATACTTCCAGCCAAATCAAATCCCCGTATCAGAGCCATAGAGACGGTGATTTAGTTGAAGTGGTGAAAGTTTGTGCGAACGCAAATACACCTGATGCAAGTTCAAAGCTACTGCCAACAGTGCACGACGACACAATCCTCCATATGGCGATTTACATGGGGAAAGAAAGCATCGCGATAGGAATCATCGAAACAAGCAGTGAGGAGCTAATTACAAAACCCAATAAGTTTGGAAACACAGCTCTTCATGAAGCTGCAGCAGCTGGTTGTGTACGAGTTGTGGAGAAATTGTTGGATAAGGCACCGGATTTGCTGTCCACTCCAAACAAGAAAGGAGAAATGCCTCTCTACACAGCAGCTCACTTTGGTCAGACCGAAATGTTCATTTTGCTGGCTGAAAAACTGAAAAATGTTCCTGATCTTGATTTCCATTTCTGCTCCTACGACCCTCAACACATACGCAGTACCATTCTTCATGCTGCAATACATGCCGAAATCTTTGAGCTTGCACTATGGATAGCTAGAAGGCCGGATTATTTAAAAACTGTTCAACTAAAGGACAAAAATTCGATGACTCCTCTTCAGCTACTCTCATCCAATTCTTCAGCATTCGAGAGTGGAATGAAATGTGGATTGATCAAGAGGATTATTTACAACTGTGCTCCATATGAAGATGCTAACGAAGAAGATGCTCATGAAAAAAATTCCATTCATGATAATTCCAAAAGATCAGCTACTGTGTTTCCAACGAGAGTCATCTCTTCAGTTAATAGATCGGTTTGGAGTGTTCTTCGAGCATGGAGTACCATGAGGGACATCTACGACGAAAGGAAGAAGCATGGATTGGCTTTAGAACTAGCCAGGATTCTGATTGCAGCAGACTATTCATGGGTCACACGAAAATCCAAAAATGGCGTGAATGAAAGTGCTGCTGGAGAAACAAGAAAGCCATCCCAAACAGAGACTCCGGATATCCCATTGTTCATTGCAACAAGCAATGGAATATTAGAAATCGTGGAGGAGACACTTACAGTACACCCTTTGTTACTTGAGTATACAAACAAAGAGAAGCAGAACATACTGCACCTCGCTGTAATGCACCGTCAGTCGCACATCCTTGATCGTGTGACGAAGAGGAACAAGAAACTAACGTCAAGGTTGGCTCGACAAACCGATAAGCATGGATTCACAATACTGCATTATGTTGGAAACATGAAATTTTATAAAGGAGGCACCCAGCATGGTCCTGCACTTCAGTTGCAAGAAGAGTTACAATGGTATGAGGAGGTGAAGAAATTAGTCCCACCATATTATGCAATGAACCGCAGCCGCATTAATGAACAAACAGAGACGCTCCAAGAGTTCCTTCGTCGAAAATATGACCAAACTGTAAGGGAATTGTCTAAGAACGTGGGTAAGATAATCCCACCAAAATCTGTAAGCAAGCTTGGCTGGGACGAAAGCAAAGAGGAGACCCCGATAGAGTACTTTGGTCGAACCCATGGGGAGCTCCTCGAGGAAGCACAAAATTGGCTAGAGCGTACCTCCGATTCGTGCTCCTTGGTGGCCGCACTAATCGCCTCCGTCGCCTTCGCAGCCGCTTTCACCATCCCGGGAGGCAACAGCGGAAGAAACGGCCAGCCCATTCTTATCGACAGCCCTTTCTTCGTGGTCTTCATCATCACTGACGCTCTCTCCATAGCCAGCTCGCTGATGTCACTCGCCATGTTCCTCTCCATCCTTTCTTCACCGTACGAGCTCGACGACTTCCGCCACTCTCTCCCTCGGAAGCTCACCCTCGGCTTCACCTCCCTCTTCTTCTCGGTGGCCGTCACCAGCCTCGCCTTTACCTCCACTCTGATGCTGACGACTCCGATAAAGAAGCGCCTCACTACAACTTTTATATACTGTGTTGCGGTTCTTCCGGTCACCATGTTTGCGCTGTTGCAGTACCCGTTGTACCTGGCCTTCAAAAAGAGTCTCAAGACCACATTCAAAGTCGTGAAAAGAGTTCTTCCATGGCCACTTACCGAAGCTGCTTGCTCAAAGTGCCATACTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

692

Amino Acids

77.74

Weight (kDa)

8.58

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 33 - 107 4.3e-06 Ankyrin repeats (3 copies)
Ank_4 PF13637 86 - 135 2.6e-07 Ankyrin repeats (many copies)
PGG PF13962 514 - 625 4e-24 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1236
AbsI CCTCGAGG 1 cut(s) 1526
AccB1I GGYRCC 2 cut(s) 313, 1244
AccI GTMKAC 1 cut(s) 1067
AccII CGCG 1 cut(s) 188
AccIII TCCGGA 1 cut(s) 979
AciI CCGC 7 cut(s) 1336, 1342, 1581, 1611, 1638, 1783, 1928
AcoI YGGCCR 4 cut(s) 1578, 1648, 1839, 2033
AcsI RAATTY 3 cut(s) 577, 715, 1229
AcuI CTGAAG 4 cut(s) 578, 600, 759, 1250
AfaI GTAC 9 cut(s) 285, 478, 817, 1047, 1499, 1555, 1766, 1964, 1973
AfiI CCNNNNNNNGG 1 cut(s) 157
AgsI TTSAA 5 cut(s) 71, 117, 563, 1984, 2008
AjnI CCWGG 2 cut(s) 872, 1974
AjuI GAANNNNNNNTTGG 4 cut(s) 839, 871, 1362, 1394
Alw21I GWGCWC 5 cut(s) 138, 676, 1524, 1571, 1773
Alw26I GTCTC 6 cut(s) 48, 968, 1028, 1355, 1478, 1997
Alw44I GTGCAC 1 cut(s) 134
AlwNI CAGNNNCTG 2 cut(s) 275, 749
Ama87I CYCGRG 2 cut(s) 1526, 1624
Aor13HI TCCGGA 1 cut(s) 979
AoxI GGCC 6 cut(s) 539, 1578, 1648, 1839, 1977, 2033
ApaLI GTGCAC 1 cut(s) 134
ApoI RAATTY 3 cut(s) 577, 715, 1229
AseI ATTAAT 1 cut(s) 1347
AspLEI GCGC 2 cut(s) 1899, 1954
AspS9I GGNCC 1 cut(s) 1256
AsuC2I CCSGG 2 cut(s) 1625, 1626
AsuHPI GGTGA 9 cut(s) 71, 88, 1312, 1609, 1752, 1798, 1810, 1837, 1933
AvaI CYCGRG 2 cut(s) 1526, 1624
AvaII GGWCC 1 cut(s) 1256
BaeGI GKGCMC 1 cut(s) 138
BalI TGGCCA 1 cut(s) 2035
BanI GGYRCC 2 cut(s) 313, 1244
BanII GRGCYC 2 cut(s) 1524, 1773
BarI GAAGNNNNNNTAC 2 cut(s) 1964, 1996
BbsI GAAGAC 1 cut(s) 1678
Bbv12I GWGCWC 5 cut(s) 138, 676, 1524, 1571, 1773
BccI CCATC 3 cut(s) 970, 1628, 1757
BceAI ACGGC 2 cut(s) 1663, 1826
BcgI CGANNNNNNTGC 2 cut(s) 683, 717
BciT130I CCWGG 2 cut(s) 874, 1976
BclI TGATCA 1 cut(s) 648
BcnI CCSGG 2 cut(s) 1625, 1626
BcoDI GTCTC 6 cut(s) 48, 968, 1028, 1355, 1478, 1997
BfaI CTAG 3 cut(s) 534, 869, 1547
BfmI CTRYAG 1 cut(s) 267
BfoI RGCGCY 1 cut(s) 1900
BmcAI AGTACT 1 cut(s) 1499
Bme1390I CCNGG 4 cut(s) 874, 1625, 1626, 1976
Bme18I GGWCC 1 cut(s) 1256
BmeT110I CYCGRG 2 cut(s) 1526, 1624
BmgT120I GGNCC 1 cut(s) 1256
BmiI GGNNCC 2 cut(s) 315, 1246
BmrFI CCNGG 4 cut(s) 874, 1625, 1626, 1976
BmsI GCATC 5 cut(s) 97, 192, 676, 691, 1863
BpiI GAAGAC 1 cut(s) 1678
BplI GAGNNNNNCTC 2 cut(s) 1541, 1573
BpmI CTGGAG 1 cut(s) 966
BpuEI CTTGAG 2 cut(s) 1082, 1979
BpuMI CCSGG 2 cut(s) 1625, 1626
BsaBI GATNNNNATC 1 cut(s) 194
BsaI GGTCTC 1 cut(s) 1478
BsaJI CCNNGG 6 cut(s) 1513, 1572, 1624, 1796, 1810, 2030
BsaWI WCCGGW 3 cut(s) 316, 979, 1936
BsaXI ACNNNNNCTCC 6 cut(s) 287, 317, 961, 991, 1691, 1721
Bsc4I CCNNNNNNNGG 1 cut(s) 157
Bse3DI GCAATG 3 cut(s) 996, 1015, 1335
Bse8I GATNNNNATC 1 cut(s) 194
BseAI TCCGGA 1 cut(s) 979
BseBI CCWGG 2 cut(s) 874, 1976
BseDI CCNNGG 6 cut(s) 1513, 1572, 1624, 1796, 1810, 2030
BseGI GGATG 5 cut(s) 605, 962, 1125, 1620, 1749
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 1 cut(s) 157
BseMI GCAATG 3 cut(s) 996, 1015, 1335
BseRI GAGGAG 6 cut(s) 230, 579, 1046, 1310, 1496, 1514
BseSI GKGCMC 1 cut(s) 138
BseYI CCCAGC 2 cut(s) 1248, 1464
BsgI GTGCAG 2 cut(s) 1079, 1245
Bsh1236I CGCG 1 cut(s) 188
BshFI GGCC 6 cut(s) 541, 1580, 1650, 1841, 1979, 2035
BshNI GGYRCC 2 cut(s) 313, 1244
BsiHKAI GWGCWC 5 cut(s) 138, 676, 1524, 1571, 1773
BsiHKCI CYCGRG 2 cut(s) 1526, 1624
BsiSI CCGG 5 cut(s) 317, 542, 980, 1625, 1937
BsiWI CGTACG 1 cut(s) 1764
BslFI GGGAC 3 cut(s) 839, 1298, 1481
BslI CCNNNNNNNGG 1 cut(s) 157
BsmAI GTCTC 6 cut(s) 48, 968, 1028, 1355, 1478, 1997
BsmBI CGTCTC 2 cut(s) 48, 1355
BsmFI GGGAC 3 cut(s) 839, 1298, 1481
BsmI GAATGC 1 cut(s) 620
BsnI GGCC 6 cut(s) 541, 1580, 1650, 1841, 1979, 2035
Bso31I GGTCTC 1 cut(s) 1478
BsoBI CYCGRG 2 cut(s) 1526, 1624
Bsp1286I GDGCHC 5 cut(s) 138, 676, 1524, 1571, 1773
Bsp13I TCCGGA 1 cut(s) 979
Bsp143I GATC 5 cut(s) 430, 648, 740, 785, 1132
Bsp19I CCATGG 2 cut(s) 1513, 2030
Bsp68I TCGCGA 1 cut(s) 188
BspACI CCGC 7 cut(s) 1336, 1342, 1581, 1611, 1638, 1783, 1928
BspANI GGCC 6 cut(s) 541, 1580, 1650, 1841, 1979, 2035
BspEI TCCGGA 1 cut(s) 979
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 4 cut(s) 259, 706, 724, 2072
BspLI GGNNCC 2 cut(s) 315, 1246
BspMAI CTGCAG 1 cut(s) 271
BspQI GCTCTTC 1 cut(s) 261
BspT107I GGYRCC 2 cut(s) 313, 1244
BspTNI GGTCTC 1 cut(s) 1478
BsrDI GCAATG 3 cut(s) 996, 1015, 1335
BssECI CCNNGG 6 cut(s) 1513, 1572, 1624, 1796, 1810, 2030
BssMI GATC 5 cut(s) 430, 648, 740, 785, 1132
BssNAI GTATAC 1 cut(s) 1068
BssT1I CCWWGG 3 cut(s) 1513, 1572, 2030
Bst1107I GTATAC 1 cut(s) 1068
Bst2UI CCWGG 2 cut(s) 874, 1976
Bst6I CTCTTC 6 cut(s) 261, 597, 778, 1139, 1272, 1832
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 7 cut(s) 405, 519, 1457, 1652, 1717, 1721, 2053
BstDEI CTNAG 1 cut(s) 1416
BstDSI CCRYGG 2 cut(s) 1513, 2030
BstEII GGTNACC 1 cut(s) 1939
BstF5I GGATG 5 cut(s) 605, 962, 1125, 1620, 1749
BstFNI CGCG 1 cut(s) 188
BstH2I RGCGCY 1 cut(s) 1900
BstHHI GCGC 2 cut(s) 1899, 1954
BstKTI GATC 5 cut(s) 433, 651, 743, 788, 1135
BstMAI GTCTC 6 cut(s) 48, 968, 1028, 1355, 1478, 1997
BstMBI GATC 5 cut(s) 430, 648, 740, 785, 1132
BstMWI GCNNNNNNNGC 8 cut(s) 133, 272, 500, 1461, 1589, 1598, 1607, 2061
BstNI CCWGG 2 cut(s) 874, 1976
BstNSI RCATGY 1 cut(s) 503
BstPI GGTNACC 1 cut(s) 1939
BstSCI CCNGG 4 cut(s) 872, 1623, 1624, 1974
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 138
BstUI CGCG 1 cut(s) 188
BstV2I GAAGAC 1 cut(s) 1678
BstZ17I GTATAC 1 cut(s) 1068
BsuRI GGCC 6 cut(s) 541, 1580, 1650, 1841, 1979, 2035
BtgI CCRYGG 2 cut(s) 1513, 2030
BtgZI GCGATG 1 cut(s) 169
BtsCI GGATG 5 cut(s) 605, 962, 1125, 1620, 1749
BtsI GCAGTG 1 cut(s) 217
BtsIMutI CAGTG 3 cut(s) 138, 217, 1695
BtuMI TCGCGA 1 cut(s) 188
Cac8I GCNNGC 7 cut(s) 405, 519, 1457, 1652, 1717, 1721, 2053
CaiI CAGNNNCTG 2 cut(s) 275, 749
CciI TCATGA 4 cut(s) 259, 706, 724, 2072
CfoI GCGC 2 cut(s) 1899, 1954
Cfr13I GGNCC 1 cut(s) 1256
Cfr9I CCCGGG 1 cut(s) 1624
CseI GACGC 2 cut(s) 1372, 1709
Csp6I GTAC 9 cut(s) 284, 477, 816, 1046, 1498, 1554, 1765, 1963, 1972
CviQI GTAC 9 cut(s) 284, 477, 816, 1046, 1498, 1554, 1765, 1963, 1972
DdeI CTNAG 1 cut(s) 1416
DpnI GATC 5 cut(s) 432, 650, 742, 787, 1134
DpnII GATC 5 cut(s) 430, 648, 740, 785, 1132
DraI TTTAAA 1 cut(s) 552
EaeI YGGCCR 4 cut(s) 1578, 1648, 1839, 2033
Eam1104I CTCTTC 6 cut(s) 261, 597, 778, 1139, 1272, 1832
EarI CTCTTC 6 cut(s) 261, 597, 778, 1139, 1272, 1832
EciI GGCGGA 1 cut(s) 1772
Ecl136II GAGCTC 2 cut(s) 1522, 1771
Eco130I CCWWGG 3 cut(s) 1513, 1572, 2030
Eco24I GRGCYC 2 cut(s) 1524, 1773
Eco31I GGTCTC 1 cut(s) 1478
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 1 cut(s) 1256
Eco53kI GAGCTC 2 cut(s) 1522, 1771
Eco57I CTGAAG 4 cut(s) 578, 600, 759, 1250
Eco88I CYCGRG 2 cut(s) 1526, 1624
Eco91I GGTNACC 1 cut(s) 1939
EcoICRI GAGCTC 2 cut(s) 1522, 1771
EcoO65I GGTNACC 1 cut(s) 1939
EcoRII CCWGG 2 cut(s) 872, 1974
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 3 cut(s) 1513, 1572, 2030
EcoT38I GRGCYC 2 cut(s) 1524, 1773
ErhI CCWWGG 3 cut(s) 1513, 1572, 2030
Esp3I CGTCTC 2 cut(s) 48, 1355
FalI AAGNNNNNCTT 2 cut(s) 1362, 1394
FaqI GGGAC 3 cut(s) 839, 1298, 1481
FauNDI CATATG 2 cut(s) 156, 679
FbaI TGATCA 1 cut(s) 648
FblI GTMKAC 1 cut(s) 1067
FokI GGATG 5 cut(s) 592, 949, 1112, 1607, 1736
FriOI GRGCYC 2 cut(s) 1524, 1773
FspBI CTAG 3 cut(s) 534, 869, 1547
GlaI GCGC 2 cut(s) 1898, 1953
GsaI CCCAGC 2 cut(s) 1252, 1468
GsuI CTGGAG 1 cut(s) 966
HaeII RGCGCY 1 cut(s) 1900
HaeIII GGCC 6 cut(s) 541, 1580, 1650, 1841, 1979, 2035
HapII CCGG 5 cut(s) 317, 542, 980, 1625, 1937
HgaI GACGC 2 cut(s) 1372, 1709
HhaI GCGC 2 cut(s) 1899, 1954
Hin6I GCGC 2 cut(s) 1897, 1952
HinP1I GCGC 2 cut(s) 1897, 1952
HindIII AAGCTT 1 cut(s) 1457
HinfI GANTC 9 cut(s) 195, 586, 765, 877, 976, 1197, 1562, 1882, 1990
HpaII CCGG 5 cut(s) 317, 542, 980, 1625, 1937
HphI GGTGA 9 cut(s) 71, 88, 1312, 1609, 1752, 1798, 1810, 1837, 1933
Hpy166II GTNNAC 5 cut(s) 136, 284, 330, 1048, 1068
Hpy188I TCNGA 7 cut(s) 45, 384, 882, 1561, 1800, 1872, 1887
Hpy8I GTNNAC 5 cut(s) 136, 284, 330, 1048, 1068
Hpy99I CGWCG 5 cut(s) 143, 839, 1386, 1601, 1778
HpyAV CCTTC 4 cut(s) 531, 1388, 1612, 1990
HpyCH4IV ACGT 2 cut(s) 1163, 1422
HpyF10VI GCNNNNNNNGC 8 cut(s) 133, 272, 500, 1461, 1589, 1598, 1607, 2061
HpyF3I CTNAG 1 cut(s) 1416
HpySE526I ACGT 2 cut(s) 1163, 1422
HspAI GCGC 2 cut(s) 1897, 1952
Kpn2I TCCGGA 1 cut(s) 979
Ksp22I TGATCA 1 cut(s) 648
Kzo9I GATC 5 cut(s) 430, 648, 740, 785, 1132
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 7 cut(s) 217, 455, 679, 1371, 1519, 1527, 1574
LweI GCATC 5 cut(s) 97, 192, 676, 691, 1863
MaeI CTAG 3 cut(s) 534, 869, 1547
MaeII ACGT 2 cut(s) 1163, 1422
MaeIII GTNAC 7 cut(s) 904, 1056, 1138, 1281, 1728, 1843, 1939
MalI GATC 5 cut(s) 432, 650, 742, 787, 1134
MboI GATC 5 cut(s) 430, 648, 740, 785, 1132
MhlI GDGCHC 5 cut(s) 138, 676, 1524, 1571, 1773
MlsI TGGCCA 1 cut(s) 2035
MluNI TGGCCA 1 cut(s) 2035
MlyI GAGTC 5 cut(s) 580, 774, 970, 1876, 1999
MmeI TCCRAC 3 cut(s) 285, 782, 1198
Mox20I TGGCCA 1 cut(s) 2035
MroI TCCGGA 1 cut(s) 979
MscI TGGCCA 1 cut(s) 2035
MseI TTAA 3 cut(s) 551, 780, 1347
MslI CAYNNNNRTG 1 cut(s) 1871
Msp20I TGGCCA 1 cut(s) 2035
MspA1I CMGCKG 2 cut(s) 275, 1638
MspI CCGG 5 cut(s) 317, 542, 980, 1625, 1937
MspR9I CCNGG 4 cut(s) 874, 1625, 1626, 1976
Mva1269I GAATGC 1 cut(s) 620
MvaI CCWGG 2 cut(s) 874, 1976
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 8 cut(s) 133, 272, 500, 1461, 1589, 1598, 1607, 2061
NciI CCSGG 2 cut(s) 1625, 1626
NcoI CCATGG 2 cut(s) 1513, 2030
NdeI CATATG 2 cut(s) 156, 679
NdeII GATC 5 cut(s) 430, 648, 740, 785, 1132
NlaIV GGNNCC 2 cut(s) 315, 1246
NmeAIII GCCGAG 1 cut(s) 1791
NmuCI GTSAC 5 cut(s) 904, 1138, 1728, 1843, 1939
NruI TCGCGA 1 cut(s) 188
NspI RCATGY 1 cut(s) 503
PaeR7I CTCGAG 1 cut(s) 1526
PagI TCATGA 4 cut(s) 259, 706, 724, 2072
PciSI GCTCTTC 1 cut(s) 261
PcsI WCGNNNNNNNCGW 1 cut(s) 1773
PctI GAATGC 1 cut(s) 620
PfeI GAWTC 4 cut(s) 195, 877, 1197, 1562
Pfl23II CGTACG 1 cut(s) 1764
PleI GAGTC 5 cut(s) 580, 773, 970, 1876, 1998
PpsI GAGTC 5 cut(s) 580, 773, 970, 1876, 1998
PshBI ATTAAT 1 cut(s) 1347
PsiI TTATAA 1 cut(s) 1236
Psp124BI GAGCTC 2 cut(s) 1524, 1773
Psp6I CCWGG 2 cut(s) 872, 1974
PspEI GGTNACC 1 cut(s) 1939
PspFI CCCAGC 2 cut(s) 1248, 1464
PspGI CCWGG 2 cut(s) 872, 1974
PspLI CGTACG 1 cut(s) 1764
PspN4I GGNNCC 2 cut(s) 315, 1246
PspPI GGNCC 1 cut(s) 1256
PspXI VCTCGAGB 1 cut(s) 1526
PstI CTGCAG 1 cut(s) 271
PstNI CAGNNNCTG 2 cut(s) 275, 749
PvuII CAGCTG 1 cut(s) 275
RruI TCGCGA 1 cut(s) 188
RsaI GTAC 9 cut(s) 285, 478, 817, 1047, 1499, 1555, 1766, 1964, 1973
RsaNI GTAC 9 cut(s) 284, 477, 816, 1046, 1498, 1554, 1765, 1963, 1972
RseI CAYNNNNRTG 1 cut(s) 1871
SacI GAGCTC 2 cut(s) 1524, 1773
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 3 cut(s) 551, 780, 1347
Sau3AI GATC 5 cut(s) 430, 648, 740, 785, 1132
Sau96I GGNCC 1 cut(s) 1256
ScaI AGTACT 1 cut(s) 1499
SchI GAGTC 5 cut(s) 580, 774, 970, 1876, 1999
ScrFI CCNGG 4 cut(s) 874, 1625, 1626, 1976
SduI GDGCHC 5 cut(s) 138, 676, 1524, 1571, 1773
SfaNI GCATC 5 cut(s) 97, 192, 676, 691, 1863
SfcI CTRYAG 1 cut(s) 267
Sfr274I CTCGAG 1 cut(s) 1526
SinI GGWCC 1 cut(s) 1256
SlaI CTCGAG 1 cut(s) 1526
SmaI CCCGGG 1 cut(s) 1626
SmiMI CAYNNNNRTG 1 cut(s) 1871
SmlI CTYRAG 3 cut(s) 1061, 1526, 1994
SmoI CTYRAG 3 cut(s) 1061, 1526, 1994
SsiI CCGC 7 cut(s) 1336, 1342, 1581, 1611, 1638, 1783, 1928
SspI AATATT 1 cut(s) 1017
SspMI CTAG 3 cut(s) 534, 869, 1547
SstI GAGCTC 2 cut(s) 1524, 1773
StyD4I CCNGG 4 cut(s) 872, 1623, 1624, 1974
StyI CCWWGG 3 cut(s) 1513, 1572, 2030
TaiI ACGT 2 cut(s) 1166, 1425
TaqII GACCGA 1 cut(s) 401
TatI WGTACW 2 cut(s) 1045, 1497
TauI GCSGC 3 cut(s) 1344, 1583, 1613
TfiI GAWTC 4 cut(s) 195, 877, 1197, 1562
Tru1I TTAA 3 cut(s) 551, 780, 1347
Tru9I TTAA 3 cut(s) 551, 780, 1347
TscAI CASTG 3 cut(s) 138, 217, 1702
TseFI GTSAC 5 cut(s) 904, 1138, 1728, 1843, 1939
Tsp45I GTSAC 5 cut(s) 904, 1138, 1728, 1843, 1939
TspGWI ACGGA 1 cut(s) 1585
TspMI CCCGGG 1 cut(s) 1624
TspRI CASTG 3 cut(s) 138, 217, 1702
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 1 cut(s) 1256
VspI ATTAAT 1 cut(s) 1347
XapI RAATTY 3 cut(s) 577, 715, 1229
XceI RCATGY 1 cut(s) 503
XhoI CTCGAG 1 cut(s) 1526
XmaI CCCGGG 1 cut(s) 1624
XmiI GTMKAC 1 cut(s) 1067
XspI CTAG 3 cut(s) 534, 869, 1547
ZrmI AGTACT 1 cut(s) 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.