Rmu_sc0006008.1_g000002

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006008.1
OG0000724
Physical Location & Seq
Forward (+)
5098 .. 7794
2697 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006008.1_g000002.1.cds

Sequence Viewer

Length: 2055 bp
atggaagaaatacgtacttccgaacaatcgaaacccctctatgaaagccttagagacggtgatgtattagaagtggtgaaagcttatgcaaaagctactactcttgatgcaagattaaagctaattccaacagtgcacgacgacacaatcctccatatggcgatttacatggagcaagaaagcatcgcaataggaatcatcgaaataagcaggcataatgacgagctaatcacacaacaaaatgagtttggaaacactgctcttcatgaggctgcagcaattgattgtgtacgtgttgtggagaagttgttggaaaaggcaccggcattgctgtccattccaaacgagaatggggaaatgcctctctatacagcagctcactttggccagaaaaaaaatttcattttgctggctgaaaaactgaaaaacgatcaacatgctcttcatccccatttgttctccctgtatccttctaacgaccctgttacaaaaagtgggaagtactcttacgaccctgaacgcatacgcggtaccattcttcatgctgcaatacatgccgagttctttgagcttgcacttttgatagctagaaagccggagtatgcaaaacttgttctactaaaatacaaaaatttgaaaacgcctcttcagctcctctcatccaattcttcagcattcaagagtggaatgaaatgtagactgatcaagaggttcatttacaactgtgctcaatacgaagatgctaaagaggaagatgttcatgaacaaaattccagtgatgatagtcatgtacaaagttccagtagagccactctgtttctacggcgaatcatgtcttcagaatggccaacgatgaagaagattcatgacgaaaggaaaaggcatgaacttgctttagaactaggcaagtttttaattgcagaagacttttcatggcacatcaaagcgccatcccagtcagagactccagatatcccattgttcattgcaacaagcaatggaatattagaaattgtggaggagacacttagagtctaccctttgtcacttgagtatacaaacaaagagaagcaaaacatactgcacctcgctatattgcaccgtcagccggacatctttgatgtgacgaagaggttaatgccaaggttggctcgacaaaccgataagaatggattcacaatactgcaccatgctggaaacatgaaattttataaaggaggcacccagcctggtcctgcacttcagttgcaagaagagttagaatggtatgagaaggtggagaagttagtcccacgatattatgcaaggaatcctgctgttgaacaaaaagagactctcgaagagttctgtagacgaaaatatacggaaactgtagaggagttgtctcagaacgcgaataagataattccacccaaatctgtaaataagcttggctgggacgaaagcaaagaggagacccccagagagtactttgctcgaacccatggggagctcctcgaggaagcacaagaatggctagagcggacctccaactcgtgctccttggtggccggactaattgcctccgtcgccttcgcggccgctttcaccatcccgggcggcaacaacgcaagaaacggccagcccatccttatcgacagccctttcttcttggtcttcatcatcactaacgctctctccatcgccagctcgctgacgtcactcgccatgttcctctccatcctgtcgtcaccgtacgagctcgaggacttccaccgctctctccctcggaagctcatcctcggctttacctccctcttcttctcggtggccgtcaccatgctcgcctttgcctccacaatgatgctgacaattccgatgaagaagcgcatgactacaactcttatatactgcgttgcggttcttccggtcaccatgtttgcgctgttgcagtacccgttgtgggaggccttaataaggactggaaagtcctcagtcaaagtcgtgaaaagaattcttccatggccacttatcgaaactgcttgctcaaaggccactaaggcccacactccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

684

Amino Acids

77.72

Weight (kDa)

6.91

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1212
AasI GACNNNNNNGTC 1 cut(s) 1966
AatII GACGTC 1 cut(s) 1700
AbsI CCTCGAGG 1 cut(s) 1496
Acc65I GGTACC 1 cut(s) 530
AccB1I GGYRCC 3 cut(s) 319, 530, 1220
AccBSI CCGCTC 2 cut(s) 1522, 1758
AccI GTMKAC 4 cut(s) 697, 1035, 1055, 1351
AccII CGCG 3 cut(s) 528, 1394, 1577
AciI CCGC 7 cut(s) 528, 1522, 1577, 1581, 1599, 1756, 1898
AcoI YGGCCR 7 cut(s) 385, 845, 1548, 1578, 1618, 1809, 2003
AcsI RAATTY 5 cut(s) 397, 631, 769, 1205, 1992
AcuI CTGAAG 4 cut(s) 632, 654, 822, 1226
AcyI GRCGYC 1 cut(s) 1697
AfaI GTAC 8 cut(s) 16, 291, 503, 532, 792, 1469, 1736, 1934
AfiI CCNNNNNNNGG 4 cut(s) 157, 1108, 1942, 1956
AflIII ACRYGT 1 cut(s) 292
AgsI TTSAA 3 cut(s) 637, 679, 1322
AjnI CCWGG 1 cut(s) 1228
Alw21I GWGCWC 5 cut(s) 138, 730, 1494, 1541, 1743
Alw26I GTCTC 6 cut(s) 48, 956, 1016, 1325, 1389, 1448
Alw44I GTGCAC 1 cut(s) 134
Ama87I CYCGRG 3 cut(s) 1496, 1594, 1742
ApaLI GTGCAC 1 cut(s) 134
ApeKI GCWGC 4 cut(s) 272, 275, 374, 545
ApoI RAATTY 5 cut(s) 397, 631, 769, 1205, 1992
Asp700I GAANNNNTTC 2 cut(s) 756, 1172
Asp718I GGTACC 1 cut(s) 530
AspLEI GCGC 3 cut(s) 949, 1869, 1924
AspS9I GGNCC 3 cut(s) 1232, 1524, 2041
AsuC2I CCSGG 2 cut(s) 1595, 1596
AsuHPI GGTGA 6 cut(s) 71, 88, 1579, 1722, 1807, 1903
AvaI CYCGRG 3 cut(s) 1496, 1594, 1742
AvaII GGWCC 2 cut(s) 1232, 1524
BaeGI GKGCMC 1 cut(s) 138
BalI TGGCCA 3 cut(s) 387, 847, 2005
BanI GGYRCC 3 cut(s) 319, 530, 1220
BanII GRGCYC 2 cut(s) 1494, 1743
BarI GAAGNNNNNNTAC 2 cut(s) 491, 523
BauI CACGAG 1 cut(s) 1534
BbsI GAAGAC 3 cut(s) 828, 930, 1648
Bbv12I GWGCWC 5 cut(s) 138, 730, 1494, 1541, 1743
BbvI GCAGC 4 cut(s) 259, 287, 386, 532
BccI CCATC 5 cut(s) 958, 1598, 1634, 1688, 1727
BceAI ACGGC 3 cut(s) 839, 1633, 1796
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 1 cut(s) 1230
BciVI GTATCC 1 cut(s) 477
BclI TGATCA 1 cut(s) 702
BcnI CCSGG 2 cut(s) 1595, 1596
BcoDI GTCTC 6 cut(s) 48, 956, 1016, 1325, 1389, 1448
BfaI CTAG 3 cut(s) 588, 902, 1517
BfmI CTRYAG 3 cut(s) 273, 1348, 1371
BfoI RGCGCY 1 cut(s) 950
BfuI GTATCC 1 cut(s) 477
BglI GCCNNNNNGGC 2 cut(s) 1577, 2039
BisI GCNGC 7 cut(s) 273, 276, 375, 546, 1578, 1581, 1600
BlsI GCNGC 7 cut(s) 274, 277, 376, 547, 1579, 1582, 1601
BmcAI AGTACT 2 cut(s) 503, 1469
Bme1390I CCNGG 3 cut(s) 1230, 1595, 1596
Bme18I GGWCC 2 cut(s) 1232, 1524
BmeT110I CYCGRG 3 cut(s) 1496, 1594, 1742
BmgT120I GGNCC 3 cut(s) 1232, 1524, 2041
BmiI GGNNCC 3 cut(s) 321, 532, 1222
BmrFI CCNGG 3 cut(s) 1230, 1595, 1596
BmrI ACTGGG 1 cut(s) 949
BmsI GCATC 4 cut(s) 97, 192, 730, 1833
BmuI ACTGGG 1 cut(s) 949
BpiI GAAGAC 3 cut(s) 828, 930, 1648
BplI GAGNNNNNCTC 2 cut(s) 1511, 1543
BpmI CTGGAG 1 cut(s) 951
BpuEI CTTGAG 1 cut(s) 1070
BpuMI CCSGG 2 cut(s) 1595, 1596
BsaAI YACGTR 2 cut(s) 14, 293
BsaHI GRCGYC 1 cut(s) 1697
BsaI GGTCTC 1 cut(s) 1448
BsaJI CCNNGG 7 cut(s) 1142, 1483, 1542, 1594, 1766, 1780, 2000
BsaWI WCCGGW 1 cut(s) 1906
BsaXI ACNNNNNCTCC 6 cut(s) 293, 323, 1523, 1553, 1661, 1691
Bsc4I CCNNNNNNNGG 4 cut(s) 157, 1108, 1942, 1956
Bse118I RCCGGY 1 cut(s) 322
Bse1I ACTGG 4 cut(s) 774, 801, 955, 1966
Bse3DI GCAATG 3 cut(s) 326, 984, 1003
BseBI CCWGG 1 cut(s) 1230
BseDI CCNNGG 7 cut(s) 1142, 1483, 1542, 1594, 1766, 1780, 2000
BseGI GGATG 7 cut(s) 445, 659, 950, 1590, 1626, 1719, 1776
BseLI CCNNNNNNNGG 4 cut(s) 157, 1108, 1942, 1956
BseMI GCAATG 3 cut(s) 326, 984, 1003
BseMII CTCAG 2 cut(s) 1400, 1986
BseNI ACTGG 4 cut(s) 774, 801, 955, 1966
BseRI GAGGAG 5 cut(s) 644, 1034, 1391, 1466, 1484
BseSI GKGCMC 1 cut(s) 138
BseX3I CGGCCG 1 cut(s) 1578
BseXI GCAGC 4 cut(s) 259, 287, 386, 532
BseYI CCCAGC 2 cut(s) 1224, 1434
BsgI GTGCAG 3 cut(s) 1067, 1169, 1221
Bsh1236I CGCG 3 cut(s) 528, 1394, 1577
Bsh1285I CGRYCG 1 cut(s) 1581
BshNI GGYRCC 3 cut(s) 319, 530, 1220
BsiEI CGRYCG 1 cut(s) 1581
BsiHKAI GWGCWC 5 cut(s) 138, 730, 1494, 1541, 1743
BsiHKCI CYCGRG 3 cut(s) 1496, 1594, 1742
BsiSI CCGG 6 cut(s) 323, 596, 1109, 1551, 1595, 1907
BsiWI CGTACG 1 cut(s) 1734
BslFI GGGAC 2 cut(s) 1274, 1451
BslI CCNNNNNNNGG 4 cut(s) 157, 1108, 1942, 1956
BsmAI GTCTC 6 cut(s) 48, 956, 1016, 1325, 1389, 1448
BsmBI CGTCTC 1 cut(s) 48
BsmFI GGGAC 2 cut(s) 1274, 1451
BsmI GAATGC 1 cut(s) 674
Bso31I GGTCTC 1 cut(s) 1448
BsoBI CYCGRG 3 cut(s) 1496, 1594, 1742
Bsp1286I GDGCHC 5 cut(s) 138, 730, 1494, 1541, 1743
Bsp1407I TGTACA 1 cut(s) 790
Bsp143I GATC 2 cut(s) 430, 702
Bsp19I CCATGG 2 cut(s) 1483, 2000
BspACI CCGC 7 cut(s) 528, 1522, 1577, 1581, 1599, 1756, 1898
BspCNI CTCAG 2 cut(s) 1399, 1985
BspFNI CGCG 3 cut(s) 528, 1394, 1577
BspHI TCATGA 3 cut(s) 265, 760, 865
BspLI GGNNCC 3 cut(s) 321, 532, 1222
BspMAI CTGCAG 1 cut(s) 277
BspQI GCTCTTC 2 cut(s) 267, 447
BspT107I GGYRCC 3 cut(s) 319, 530, 1220
BspTNI GGTCTC 1 cut(s) 1448
BsrBI CCGCTC 2 cut(s) 1522, 1758
BsrDI GCAATG 3 cut(s) 326, 984, 1003
BsrFI RCCGGY 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 790
BsrI ACTGG 4 cut(s) 774, 801, 955, 1966
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 7 cut(s) 1142, 1483, 1542, 1594, 1766, 1780, 2000
BssMI GATC 2 cut(s) 430, 702
BssNAI GTATAC 1 cut(s) 1056
BssNI GRCGYC 1 cut(s) 1697
BssSI CACGAG 1 cut(s) 1534
BssT1I CCWWGG 4 cut(s) 1142, 1483, 1542, 2000
Bst1107I GTATAC 1 cut(s) 1056
Bst2BI CACGAG 1 cut(s) 1534
Bst2UI CCWGG 1 cut(s) 1230
Bst4CI ACNGT 6 cut(s) 59, 133, 725, 1103, 1372, 1734
Bst6I CTCTTC 7 cut(s) 267, 447, 651, 1124, 1248, 1335, 1802
BstACI GRCGYC 1 cut(s) 1697
BstAPI GCANNNNNTGC 1 cut(s) 554
BstAUI TGTACA 1 cut(s) 790
BstBAI YACGTR 2 cut(s) 14, 293
BstC8I GCNNGC 8 cut(s) 212, 411, 573, 1622, 1687, 1691, 1824, 2023
BstDEI CTNAG 5 cut(s) 50, 1028, 1386, 1972, 2037
BstDSI CCRYGG 2 cut(s) 1483, 2000
BstEII GGTNACC 1 cut(s) 1909
BstENI CCTNNNNNAGG 1 cut(s) 1954
BstF5I GGATG 7 cut(s) 445, 659, 950, 1590, 1626, 1719, 1776
BstFNI CGCG 3 cut(s) 528, 1394, 1577
BstH2I RGCGCY 1 cut(s) 950
BstHHI GCGC 3 cut(s) 949, 1869, 1924
BstKTI GATC 2 cut(s) 433, 705
BstMAI GTCTC 6 cut(s) 48, 956, 1016, 1325, 1389, 1448
BstMBI GATC 2 cut(s) 430, 702
BstMCI CGRYCG 1 cut(s) 1581
BstMWI GCNNNNNNNGC 6 cut(s) 554, 649, 1105, 1568, 1577, 2039
BstNI CCWGG 1 cut(s) 1230
BstNSI RCATGY 2 cut(s) 440, 557
BstPI GGTNACC 1 cut(s) 1909
BstSCI CCNGG 3 cut(s) 1228, 1593, 1594
BstSFI CTRYAG 3 cut(s) 273, 1348, 1371
BstSLI GKGCMC 1 cut(s) 138
BstSNI TACGTA 1 cut(s) 14
BstUI CGCG 3 cut(s) 528, 1394, 1577
BstV1I GCAGC 4 cut(s) 259, 287, 386, 532
BstV2I GAAGAC 3 cut(s) 828, 930, 1648
BstZ17I GTATAC 1 cut(s) 1056
BstZI CGGCCG 1 cut(s) 1578
BsuI GTATCC 1 cut(s) 477
BtgI CCRYGG 2 cut(s) 1483, 2000
BtgZI GCGATG 2 cut(s) 169, 1666
BtsCI GGATG 7 cut(s) 445, 659, 950, 1590, 1626, 1719, 1776
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 3 cut(s) 138, 255, 781
Cac8I GCNNGC 8 cut(s) 212, 411, 573, 1622, 1687, 1691, 1824, 2023
CciI TCATGA 3 cut(s) 265, 760, 865
CciNI GCGGCCGC 1 cut(s) 1578
CfoI GCGC 3 cut(s) 949, 1869, 1924
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 3 cut(s) 1232, 1524, 2041
Cfr9I CCCGGG 1 cut(s) 1594
Csp6I GTAC 8 cut(s) 15, 290, 502, 531, 791, 1468, 1735, 1933
CviQI GTAC 8 cut(s) 15, 290, 502, 531, 791, 1468, 1735, 1933
DdeI CTNAG 5 cut(s) 50, 1028, 1386, 1972, 2037
DpnI GATC 2 cut(s) 432, 704
DpnII GATC 2 cut(s) 430, 702
DrdI GACNNNNNNGTC 1 cut(s) 1966
DseDI GACNNNNNNGTC 1 cut(s) 1966
EaeI YGGCCR 7 cut(s) 385, 845, 1548, 1578, 1618, 1809, 2003
EagI CGGCCG 1 cut(s) 1578
Eam1104I CTCTTC 7 cut(s) 267, 447, 651, 1124, 1248, 1335, 1802
EarI CTCTTC 7 cut(s) 267, 447, 651, 1124, 1248, 1335, 1802
Ecl136II GAGCTC 2 cut(s) 1492, 1741
EclXI CGGCCG 1 cut(s) 1578
Eco105I TACGTA 1 cut(s) 14
Eco130I CCWWGG 4 cut(s) 1142, 1483, 1542, 2000
Eco147I AGGCCT 1 cut(s) 1949
Eco24I GRGCYC 2 cut(s) 1494, 1743
Eco31I GGTCTC 1 cut(s) 1448
Eco32I GATATC 1 cut(s) 973
Eco47I GGWCC 2 cut(s) 1232, 1524
Eco52I CGGCCG 1 cut(s) 1578
Eco53kI GAGCTC 2 cut(s) 1492, 1741
Eco57I CTGAAG 4 cut(s) 632, 654, 822, 1226
Eco88I CYCGRG 3 cut(s) 1496, 1594, 1742
Eco91I GGTNACC 1 cut(s) 1909
EcoICRI GAGCTC 2 cut(s) 1492, 1741
EcoNI CCTNNNNNAGG 1 cut(s) 1954
EcoO65I GGTNACC 1 cut(s) 1909
EcoRI GAATTC 1 cut(s) 1992
EcoRII CCWGG 1 cut(s) 1228
EcoRV GATATC 1 cut(s) 973
EcoT14I CCWWGG 4 cut(s) 1142, 1483, 1542, 2000
EcoT38I GRGCYC 2 cut(s) 1494, 1743
ErhI CCWWGG 4 cut(s) 1142, 1483, 1542, 2000
Esp3I CGTCTC 1 cut(s) 48
FaqI GGGAC 2 cut(s) 1274, 1451
FauNDI CATATG 1 cut(s) 156
FbaI TGATCA 1 cut(s) 702
FblI GTMKAC 4 cut(s) 697, 1035, 1055, 1351
Fnu4HI GCNGC 7 cut(s) 273, 276, 375, 546, 1578, 1581, 1600
FokI GGATG 7 cut(s) 432, 646, 937, 1577, 1613, 1706, 1763
FriOI GRGCYC 2 cut(s) 1494, 1743
Fsp4HI GCNGC 7 cut(s) 273, 276, 375, 546, 1578, 1581, 1600
FspBI CTAG 3 cut(s) 588, 902, 1517
GlaI GCGC 3 cut(s) 948, 1868, 1923
GluI GCNGC 7 cut(s) 273, 276, 375, 546, 1578, 1581, 1600
GsaI CCCAGC 2 cut(s) 1228, 1438
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 950
HapII CCGG 6 cut(s) 323, 596, 1109, 1551, 1595, 1907
HhaI GCGC 3 cut(s) 949, 1869, 1924
Hin1I GRCGYC 1 cut(s) 1697
Hin6I GCGC 3 cut(s) 947, 1867, 1922
HinP1I GCGC 3 cut(s) 947, 1867, 1922
HindIII AAGCTT 2 cut(s) 81, 1427
HinfI GANTC 8 cut(s) 195, 828, 862, 964, 1032, 1173, 1309, 1333
HpaII CCGG 6 cut(s) 323, 596, 1109, 1551, 1595, 1907
HphI GGTGA 6 cut(s) 71, 88, 1579, 1722, 1807, 1903
Hpy166II GTNNAC 6 cut(s) 136, 290, 698, 1036, 1056, 1352
Hpy188I TCNGA 6 cut(s) 22, 841, 961, 1389, 1770, 1857
Hpy188III TCNNGA 9 cut(s) 104, 266, 679, 706, 761, 866, 968, 1337, 1984
Hpy8I GTNNAC 6 cut(s) 136, 290, 698, 1036, 1056, 1352
Hpy99I CGWCG 2 cut(s) 143, 1571
HpyAV CCTTC 3 cut(s) 480, 1267, 1582
HpyCH4III ACNGT 6 cut(s) 59, 133, 725, 1103, 1372, 1734
HpyCH4IV ACGT 3 cut(s) 13, 292, 1697
HpyF10VI GCNNNNNNNGC 6 cut(s) 554, 649, 1105, 1568, 1577, 2039
HpyF3I CTNAG 5 cut(s) 50, 1028, 1386, 1972, 2037
HpySE526I ACGT 3 cut(s) 13, 292, 1697
Hsp92I GRCGYC 1 cut(s) 1697
HspAI GCGC 3 cut(s) 947, 1867, 1922
KpnI GGTACC 1 cut(s) 534
Ksp22I TGATCA 1 cut(s) 702
Kzo9I GATC 2 cut(s) 430, 702
LguI GCTCTTC 2 cut(s) 267, 447
LmnI GCTCC 5 cut(s) 172, 657, 1489, 1497, 1544
Lsp1109I GCAGC 4 cut(s) 259, 287, 386, 532
LweI GCATC 4 cut(s) 97, 192, 730, 1833
MaeI CTAG 3 cut(s) 588, 902, 1517
MaeII ACGT 3 cut(s) 13, 292, 1697
MaeIII GTNAC 7 cut(s) 484, 1044, 1123, 1698, 1728, 1813, 1909
MalI GATC 2 cut(s) 432, 704
MbiI CCGCTC 2 cut(s) 1522, 1758
MboI GATC 2 cut(s) 430, 702
MfeI CAATTG 1 cut(s) 279
MhlI GDGCHC 5 cut(s) 138, 730, 1494, 1541, 1743
MlsI TGGCCA 3 cut(s) 387, 847, 2005
MluNI TGGCCA 3 cut(s) 387, 847, 2005
MlyI GAGTC 3 cut(s) 958, 1041, 1327
MmeI TCCRAC 3 cut(s) 152, 291, 1554
Mox20I TGGCCA 3 cut(s) 387, 847, 2005
MroXI GAANNNNTTC 2 cut(s) 756, 1172
MscI TGGCCA 3 cut(s) 387, 847, 2005
MseI TTAA 4 cut(s) 116, 914, 1136, 1952
MslI CAYNNNNRTG 2 cut(s) 1510, 1841
Msp20I TGGCCA 3 cut(s) 387, 847, 2005
MspI CCGG 6 cut(s) 323, 596, 1109, 1551, 1595, 1907
MspR9I CCNGG 3 cut(s) 1230, 1595, 1596
MunI CAATTG 1 cut(s) 279
Mva1269I GAATGC 1 cut(s) 674
MvaI CCWGG 1 cut(s) 1230
MvnI CGCG 3 cut(s) 528, 1394, 1577
MwoI GCNNNNNNNGC 6 cut(s) 554, 649, 1105, 1568, 1577, 2039
NciI CCSGG 2 cut(s) 1595, 1596
NcoI CCATGG 2 cut(s) 1483, 2000
NdeI CATATG 1 cut(s) 156
NdeII GATC 2 cut(s) 430, 702
NlaIV GGNNCC 3 cut(s) 321, 532, 1222
NmeAIII GCCGAG 2 cut(s) 583, 1761
NmuCI GTSAC 6 cut(s) 1044, 1123, 1698, 1728, 1813, 1909
NotI GCGGCCGC 1 cut(s) 1578
NspI RCATGY 2 cut(s) 440, 557
PaeR7I CTCGAG 2 cut(s) 1496, 1742
PagI TCATGA 3 cut(s) 265, 760, 865
PceI AGGCCT 1 cut(s) 1949
PciSI GCTCTTC 2 cut(s) 267, 447
PctI GAATGC 1 cut(s) 674
PdmI GAANNNNTTC 2 cut(s) 756, 1172
PfeI GAWTC 5 cut(s) 195, 828, 862, 1173, 1309
Pfl23II CGTACG 1 cut(s) 1734
PkrI GCNGC 7 cut(s) 274, 277, 376, 547, 1579, 1582, 1601
PleI GAGTC 3 cut(s) 958, 1040, 1327
PpsI GAGTC 3 cut(s) 958, 1040, 1327
Ppu21I YACGTR 2 cut(s) 14, 293
PsiI TTATAA 1 cut(s) 1212
Psp124BI GAGCTC 2 cut(s) 1494, 1743
Psp6I CCWGG 1 cut(s) 1228
PspEI GGTNACC 1 cut(s) 1909
PspFI CCCAGC 2 cut(s) 1224, 1434
PspGI CCWGG 1 cut(s) 1228
PspLI CGTACG 1 cut(s) 1734
PspN4I GGNNCC 3 cut(s) 321, 532, 1222
PspPI GGNCC 3 cut(s) 1232, 1524, 2041
PspXI VCTCGAGB 2 cut(s) 1496, 1742
PstI CTGCAG 1 cut(s) 277
RsaI GTAC 8 cut(s) 16, 291, 503, 532, 792, 1469, 1736, 1934
RsaNI GTAC 8 cut(s) 15, 290, 502, 531, 791, 1468, 1735, 1933
RseI CAYNNNNRTG 2 cut(s) 1510, 1841
SacI GAGCTC 2 cut(s) 1494, 1743
SapI GCTCTTC 2 cut(s) 267, 447
SaqAI TTAA 4 cut(s) 116, 914, 1136, 1952
SatI GCNGC 7 cut(s) 273, 276, 375, 546, 1578, 1581, 1600
Sau3AI GATC 2 cut(s) 430, 702
Sau96I GGNCC 3 cut(s) 1232, 1524, 2041
ScaI AGTACT 2 cut(s) 503, 1469
SchI GAGTC 3 cut(s) 958, 1041, 1327
ScrFI CCNGG 3 cut(s) 1230, 1595, 1596
SduI GDGCHC 5 cut(s) 138, 730, 1494, 1541, 1743
SfaNI GCATC 4 cut(s) 97, 192, 730, 1833
SfcI CTRYAG 3 cut(s) 273, 1348, 1371
SfiI GGCCNNNNNGGCC 1 cut(s) 2039
Sfr274I CTCGAG 2 cut(s) 1496, 1742
SinI GGWCC 2 cut(s) 1232, 1524
SlaI CTCGAG 2 cut(s) 1496, 1742
SmaI CCCGGG 1 cut(s) 1596
SmiMI CAYNNNNRTG 2 cut(s) 1510, 1841
SmlI CTYRAG 3 cut(s) 1049, 1496, 1742
SmoI CTYRAG 3 cut(s) 1049, 1496, 1742
SnaBI TACGTA 1 cut(s) 14
SseBI AGGCCT 1 cut(s) 1949
SsiI CCGC 7 cut(s) 528, 1522, 1577, 1581, 1599, 1756, 1898
SspI AATATT 1 cut(s) 1005
SspMI CTAG 3 cut(s) 588, 902, 1517
SstI GAGCTC 2 cut(s) 1494, 1743
StuI AGGCCT 1 cut(s) 1949
StyD4I CCNGG 3 cut(s) 1228, 1593, 1594
StyI CCWWGG 4 cut(s) 1142, 1483, 1542, 2000
TaaI ACNGT 6 cut(s) 59, 133, 725, 1103, 1372, 1734
TaiI ACGT 3 cut(s) 16, 295, 1700
TaqI TCGA 9 cut(s) 29, 201, 1153, 1338, 1477, 1497, 1635, 1743, 2013
TatI WGTACW 3 cut(s) 501, 790, 1467
TauI GCSGC 3 cut(s) 1580, 1583, 1602
TfiI GAWTC 5 cut(s) 195, 828, 862, 1173, 1309
Tru1I TTAA 4 cut(s) 116, 914, 1136, 1952
Tru9I TTAA 4 cut(s) 116, 914, 1136, 1952
TscAI CASTG 3 cut(s) 138, 262, 781
TseFI GTSAC 6 cut(s) 1044, 1123, 1698, 1728, 1813, 1909
TseI GCWGC 4 cut(s) 272, 275, 374, 545
Tsp45I GTSAC 6 cut(s) 1044, 1123, 1698, 1728, 1813, 1909
TspGWI ACGGA 2 cut(s) 1379, 1555
TspMI CCCGGG 1 cut(s) 1594
TspRI CASTG 3 cut(s) 138, 262, 781
VneI GTGCAC 1 cut(s) 134
VpaK11BI GGWCC 2 cut(s) 1232, 1524
XagI CCTNNNNNAGG 1 cut(s) 1954
XapI RAATTY 5 cut(s) 397, 631, 769, 1205, 1992
XceI RCATGY 2 cut(s) 440, 557
XhoI CTCGAG 2 cut(s) 1496, 1742
XmaI CCCGGG 1 cut(s) 1594
XmiI GTMKAC 4 cut(s) 697, 1035, 1055, 1351
XmnI GAANNNNTTC 2 cut(s) 756, 1172
XspI CTAG 3 cut(s) 588, 902, 1517
ZraI GACGTC 1 cut(s) 1698
ZrmI AGTACT 2 cut(s) 503, 1469
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.