Prupe.4G014200_v2.0.a1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000724
Physical Location & Seq
Forward (+)
659249 .. 662400
3152 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G014200.1

Sequence Viewer

Length: 2121 bp
ATGGAGAGCAAAGAGATAGCATACTGGAAAACGGAAGATGTTCTTAAAGAAGAGGTAGAGAGTGCAAGTGAAATTGAAGTACTGAAGGGTCCTTATGATCTAGCCATGGTGAATGACTGGGAAGGCATGAAGAGATACTACGCGGACAATCAGGAAAAACTGAATTGTCCAATAACAGTGGACGAAGACACTGCATTGCACATTGTAGCTTCCTGCTGCAGTAAATCACAGGGCAAACAAGTCCTTGAGTTCTTGATTAATTTACTGCCACAAAGCTATGATGAAAGATGCAAGGCCGTGAGGTTTCCAAATAAACTCGGCAACAACGTTCTTCACGAGGTGGCGATGTCCGGCAATCTGGAGGCAGCAACTTTCTTAGTGAGCAACTTCAACAAACCTGCAGGAAAAATTAGTAATGAGGAGAATTCTACACTGCCTCTGCTAGATATTCGGAACGAGTTAGGAGAATCGCCATTGTACAGGGCTGCTGCTCTTGGTCACCCTTACCTGGTCCAGTTTTTTGCTGACAAACTGGAGGAGGAGAATCCGGAGAATCTTCGGAGGCACTTCCACCGAAATGATAGAATGTCCATTCTTCATATCGCAGTCATTGGCCAACAATTTAGGACTGCTCTTTGGTTGCAGAGCAAGTACCCATTTCTTGCAACTAAGAGGGAAGGTAAAGGATTGACAAGCCTTCAATTGCTAGCCCAAATGCCAACTGCCTTCAAACCACAATTTCAACAAAGCAGATGGAAGATGCTCATATATTATTGCCTTCCTGCTCGAGACCTGGAGGTCACAACAAATCCCAAGGATGATGTGGAGAGCAGCTTGGGCAGCAACCAAGACCCCCAAGCCATCTCTTGGAAGAAGCCTGAAGGTATTCTGAAGGTGTACACTTCCCTGTGGGACTTCCTTGCTAAAGAAATGGACATAATCGAAAAGATCTGGAAGGATAAGAGAATTAAACATGCTCTTAAAAACCTCATCCCTTTGCTCGTCGAGAAAGACAATTCATGGCAGAATTCTAAAGAAGCAAAGGGCAAGACGATATCTCTGGGGTCAGTGGAAAATCTTTGTAAGGGTGATAATGATGGAGGAGATCAACAAGGAAAGGATTCCGCAGAACCAACCAATTCTAAGAAGCAGAGCATTTATAAGTATAACCCATTGCTTATAGCAACTATCACTGGAATTGTGCCTATTGTTGCAGAGATACTTAGGCAGCATCCTCAAGCAGCTGAGCACGTTAGCCATAGTGAACAGAACATTTTGCATCTGGCCATTAAGCACCGTCAAAGAGAGATCCTTGAGCTTCTAAAAAGGAAGCCAATAACCATCTCAAGGTTGAATGAGATGATTGACAGTGATGGCAACACCATATTGCACCAAGCTGCAGATAGGAGCTACTACTCTGTAGCAATTTCTGAGAAATTAATTGGCCCAGCCATGCAATTGCAAGCAGAATTGCGTTGGATGATGGGTGTGAAGAACATATTACCACCTCATTACATCATGCACCACAACAACAAGGATCAGACAGCGGAGGAGCTGTTCAATGATGAGCATAATGAGCTTCTGAAGTCGGCACAAGAATGGATAAAAGACACAGCACAGTCGTGCTCAACTGTTGCTGTGCTGGTGGCCACCGTTGTCTTTGCAGCTGCCTACGCCATGCCTGGGGGTAACGAACCAAATGGCCTTCCTGTTTTCCATGATTCTCCTCTCTTCTGGCTCTTCACCTGCATGGACGTCGTGGCCATCGCCTGCTCATTGTCTTCGGTAGCCTTTTTCCTCTCCATCCTCTCCTCTCCCCTTGAGTACCCCTTTTTCTGTCACGGTCTTCCCCGCAAGCTCATGATCGGGTTCACCTTGCTCTTCTTGTCTATGGCAACCACCATGCTCGCCTTTGCTGCTACTATTTTGCTTGTGATTCGTATTGAGAAGAAATGGACTAAGTCTCTGCTTTACTGTATTGCGTTTTTTCCCGTCCCTCTATTTGGCTTGCTACAATTTCCTATGTATCAGAAAATTACCAAGATTTTCCGCCCCTTCTTCATTCCCTTTCTCGGCTGTTGGAAAAGGAGATCAATATGTGGTAAGAGAAAGGCGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

707

Amino Acids

80.24

Weight (kDa)

7.85

Isoelectric Point (pI)

54.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1161
AarI CACCTGC 1 cut(s) 1754
AasI GACNNNNNNGTC 1 cut(s) 797
AatII GACGTC 1 cut(s) 1758
Acc36I ACCTGC 2 cut(s) 406, 1754
AccB7I CCANNNNNTGG 1 cut(s) 867
AccII CGCG 1 cut(s) 143
AccIII TCCGGA 1 cut(s) 547
AciI CCGC 5 cut(s) 143, 1125, 1547, 1852, 2050
AclI AACGTT 1 cut(s) 327
AclWI GGATC 2 cut(s) 1303, 1545
AcoI YGGCCR 4 cut(s) 613, 1284, 1647, 1761
AcsI RAATTY 2 cut(s) 424, 1027
AcuI CTGAAG 4 cut(s) 104, 900, 911, 1604
AcyI GRCGYC 1 cut(s) 1755
AdeI CACNNNGTG 1 cut(s) 340
AfaI GTAC 5 cut(s) 81, 479, 653, 899, 1826
AfiI CCNNNNNNNGG 6 cut(s) 508, 867, 1347, 1683, 2003, 2072
AgsI TTSAA 7 cut(s) 77, 391, 701, 730, 743, 1354, 1561
AjnI CCWGG 3 cut(s) 507, 792, 1681
AleI CACNNNNGTG 1 cut(s) 1621
AloI GAACNNNNNNTCC 2 cut(s) 1541, 1573
Alw21I GWGCWC 2 cut(s) 1251, 1628
Alw26I GTCTC 2 cut(s) 783, 1968
AlwI GGATC 2 cut(s) 1303, 1545
Ama87I CYCGRG 1 cut(s) 786
Aor13HI TCCGGA 1 cut(s) 547
AoxI GGCC 7 cut(s) 294, 613, 1284, 1444, 1647, 1702, 1761
ApoI RAATTY 2 cut(s) 424, 1027
AseI ATTAAT 2 cut(s) 258, 1439
Asp700I GAANNNNTTC 3 cut(s) 39, 885, 1120
AspS9I GGNCC 3 cut(s) 89, 511, 1445
AsuHPI GGTGA 5 cut(s) 121, 491, 1100, 1735, 1864
AsuNHI GCTAGC 1 cut(s) 706
AvaI CYCGRG 1 cut(s) 786
AvaII GGWCC 2 cut(s) 89, 511
BalI TGGCCA 4 cut(s) 615, 1286, 1649, 1763
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BauI CACGAG 1 cut(s) 335
BbsI GAAGAC 3 cut(s) 192, 1773, 1838
Bbv12I GWGCWC 2 cut(s) 1251, 1628
BccI CCATC 8 cut(s) 747, 869, 1091, 1349, 1367, 1477, 1772, 1811
BceAI ACGGC 1 cut(s) 281
BcgI CGANNNNNNTGC 4 cut(s) 173, 207, 1738, 1772
BciT130I CCWGG 3 cut(s) 509, 794, 1683
BcoDI GTCTC 2 cut(s) 783, 1968
BfaI CTAG 3 cut(s) 101, 443, 707
BfmI CTRYAG 4 cut(s) 217, 399, 1398, 1419
BfuAI ACCTGC 2 cut(s) 406, 1754
BglII AGATCT 1 cut(s) 948
BlpI GCTNAGC 1 cut(s) 1245
BmcAI AGTACT 1 cut(s) 81
Bme1390I CCNGG 3 cut(s) 509, 794, 1683
Bme18I GGWCC 2 cut(s) 89, 511
BmeT110I CYCGRG 1 cut(s) 786
BmgT120I GGNCC 3 cut(s) 89, 511, 1445
BmiI GGNNCC 1 cut(s) 90
BmrFI CCNGG 3 cut(s) 509, 794, 1683
BmrI ACTGGG 1 cut(s) 127
BmsI GCATC 4 cut(s) 278, 750, 1240, 1288
BmtI GCTAGC 1 cut(s) 710
BmuI ACTGGG 1 cut(s) 127
BpiI GAAGAC 3 cut(s) 192, 1773, 1838
BpmI CTGGAG 3 cut(s) 380, 554, 815
Bpu1102I GCTNAGC 1 cut(s) 1245
BpuEI CTTGAG 5 cut(s) 266, 1221, 1330, 1334, 1841
BsaHI GRCGYC 1 cut(s) 1755
BsaI GGTCTC 1 cut(s) 783
BsaJI CCNNGG 3 cut(s) 105, 813, 1682
BsaWI WCCGGW 1 cut(s) 547
BsaXI ACNNNNNCTCC 2 cut(s) 1541, 1571
Bsc4I CCNNNNNNNGG 6 cut(s) 508, 867, 1347, 1683, 2003, 2072
Bse1I ACTGG 5 cut(s) 29, 122, 514, 537, 1198
Bse3DI GCAATG 2 cut(s) 194, 1172
BseAI TCCGGA 1 cut(s) 547
BseBI CCWGG 3 cut(s) 509, 794, 1683
BseDI CCNNGG 3 cut(s) 105, 813, 1682
BseGI GGATG 5 cut(s) 823, 990, 1231, 1485, 1803
BseLI CCNNNNNNNGG 6 cut(s) 508, 867, 1347, 1683, 2003, 2072
BseMI GCAATG 2 cut(s) 194, 1172
BseMII CTCAG 2 cut(s) 1236, 1422
BseNI ACTGG 5 cut(s) 29, 122, 514, 537, 1198
BseRI GAGGAG 7 cut(s) 434, 551, 554, 1116, 1565, 1716, 1801
BseYI CCCAGC 1 cut(s) 1447
Bsh1236I CGCG 1 cut(s) 143
BshFI GGCC 7 cut(s) 296, 615, 1286, 1446, 1649, 1704, 1763
BsiHKAI GWGCWC 2 cut(s) 1251, 1628
BsiHKCI CYCGRG 1 cut(s) 786
BsiSI CCGG 2 cut(s) 351, 548
BslFI GGGAC 2 cut(s) 926, 1979
BslI CCNNNNNNNGG 6 cut(s) 508, 867, 1347, 1683, 2003, 2072
BsmAI GTCTC 2 cut(s) 783, 1968
BsmFI GGGAC 2 cut(s) 926, 1979
BsnI GGCC 7 cut(s) 296, 615, 1286, 1446, 1649, 1704, 1763
Bso31I GGTCTC 1 cut(s) 783
BsoBI CYCGRG 1 cut(s) 786
Bsp1286I GDGCHC 2 cut(s) 1251, 1628
Bsp13I TCCGGA 1 cut(s) 547
Bsp1407I TGTACA 2 cut(s) 477, 897
Bsp143I GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
Bsp1720I GCTNAGC 1 cut(s) 1245
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 5 cut(s) 143, 1125, 1547, 1852, 2050
BspANI GGCC 7 cut(s) 296, 615, 1286, 1446, 1649, 1704, 1763
BspCNI CTCAG 2 cut(s) 1237, 1423
BspEI TCCGGA 1 cut(s) 547
BspFNI CGCG 1 cut(s) 143
BspHI TCATGA 1 cut(s) 1860
BspLI GGNNCC 1 cut(s) 90
BspMAI CTGCAG 3 cut(s) 221, 403, 1402
BspMI ACCTGC 2 cut(s) 406, 1754
BspOI GCTAGC 1 cut(s) 710
BspPI GGATC 2 cut(s) 1303, 1545
BspQI GCTCTTC 2 cut(s) 1745, 1886
BspTNI GGTCTC 1 cut(s) 783
BsrDI GCAATG 2 cut(s) 194, 1172
BsrGI TGTACA 2 cut(s) 477, 897
BsrI ACTGG 5 cut(s) 29, 122, 514, 537, 1198
BssECI CCNNGG 3 cut(s) 105, 813, 1682
BssMI GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
BssNI GRCGYC 1 cut(s) 1755
BssSI CACGAG 1 cut(s) 335
BssT1I CCWWGG 2 cut(s) 105, 813
Bst2BI CACGAG 1 cut(s) 335
Bst2UI CCWGG 3 cut(s) 509, 794, 1683
Bst4CI ACNGT 8 cut(s) 178, 1298, 1370, 1620, 1633, 1654, 1844, 1976
Bst6I CTCTTC 5 cut(s) 45, 125, 1736, 1745, 1886
BstACI GRCGYC 1 cut(s) 1755
BstAUI TGTACA 2 cut(s) 477, 897
BstC8I GCNNGC 6 cut(s) 708, 1464, 1771, 1856, 1908, 2009
BstDEI CTNAG 7 cut(s) 376, 669, 1143, 1223, 1245, 1431, 1959
BstDSI CCRYGG 1 cut(s) 105
BstEII GGTNACC 1 cut(s) 497
BstF5I GGATG 5 cut(s) 823, 990, 1231, 1485, 1803
BstFNI CGCG 1 cut(s) 143
BstKTI GATC 7 cut(s) 100, 951, 1108, 1311, 1540, 1866, 2093
BstMAI GTCTC 2 cut(s) 783, 1968
BstMBI GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
BstMWI GCNNNNNNNGC 5 cut(s) 837, 840, 1576, 1673, 1916
BstNI CCWGG 3 cut(s) 509, 794, 1683
BstNSI RCATGY 1 cut(s) 977
BstPI GGTNACC 1 cut(s) 497
BstSCI CCNGG 3 cut(s) 507, 792, 1681
BstSFI CTRYAG 4 cut(s) 217, 399, 1398, 1419
BstUI CGCG 1 cut(s) 143
BstV2I GAAGAC 3 cut(s) 192, 1773, 1838
BstX2I RGATCY 2 cut(s) 948, 1308
BstYI RGATCY 2 cut(s) 948, 1308
BsuRI GGCC 7 cut(s) 296, 615, 1286, 1446, 1649, 1704, 1763
BtgI CCRYGG 1 cut(s) 105
BtgZI GCGATG 2 cut(s) 359, 1750
BtsCI GGATG 5 cut(s) 823, 990, 1231, 1485, 1803
BtsI GCAGTG 2 cut(s) 189, 431
BtsIMutI CAGTG 6 cut(s) 183, 189, 431, 1074, 1191, 1375
BveI ACCTGC 2 cut(s) 406, 1754
Cac8I GCNNGC 6 cut(s) 708, 1464, 1771, 1856, 1908, 2009
CciI TCATGA 1 cut(s) 1860
Cfr13I GGNCC 3 cut(s) 89, 511, 1445
CsiI ACCWGGT 1 cut(s) 507
Csp6I GTAC 5 cut(s) 80, 478, 652, 898, 1825
CspCI CAANNNNNGTGG 2 cut(s) 159, 194
CviQI GTAC 5 cut(s) 80, 478, 652, 898, 1825
DdeI CTNAG 7 cut(s) 376, 669, 1143, 1223, 1245, 1431, 1959
DpnI GATC 7 cut(s) 99, 950, 1107, 1310, 1539, 1865, 2092
DpnII GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
DraIII CACNNNGTG 1 cut(s) 340
DrdI GACNNNNNNGTC 1 cut(s) 797
DseDI GACNNNNNNGTC 1 cut(s) 797
EaeI YGGCCR 4 cut(s) 613, 1284, 1647, 1761
Eam1104I CTCTTC 5 cut(s) 45, 125, 1736, 1745, 1886
EarI CTCTTC 5 cut(s) 45, 125, 1736, 1745, 1886
EciI GGCGGA 1 cut(s) 2039
Eco130I CCWWGG 2 cut(s) 105, 813
Eco31I GGTCTC 1 cut(s) 783
Eco32I GATATC 1 cut(s) 1056
Eco47I GGWCC 2 cut(s) 89, 511
Eco57I CTGAAG 4 cut(s) 104, 900, 911, 1604
Eco88I CYCGRG 1 cut(s) 786
Eco91I GGTNACC 1 cut(s) 497
EcoO109I RGGNCCY 1 cut(s) 89
EcoO65I GGTNACC 1 cut(s) 497
EcoRI GAATTC 2 cut(s) 424, 1027
EcoRII CCWGG 3 cut(s) 507, 792, 1681
EcoRV GATATC 1 cut(s) 1056
EcoT14I CCWWGG 2 cut(s) 105, 813
ErhI CCWWGG 2 cut(s) 105, 813
FalI AAGNNNNNCTT 2 cut(s) 27, 59
FaqI GGGAC 2 cut(s) 926, 1979
FauI CCCGC 1 cut(s) 1859
FokI GGATG 5 cut(s) 830, 977, 1218, 1492, 1790
FspBI CTAG 3 cut(s) 101, 443, 707
GsaI CCCAGC 1 cut(s) 1451
GsuI CTGGAG 3 cut(s) 380, 554, 815
HaeIII GGCC 7 cut(s) 296, 615, 1286, 1446, 1649, 1704, 1763
HapII CCGG 2 cut(s) 351, 548
Hin1I GRCGYC 1 cut(s) 1755
HinfI GANTC 6 cut(s) 467, 544, 553, 1121, 1721, 1936
HpaII CCGG 2 cut(s) 351, 548
HphI GGTGA 5 cut(s) 121, 491, 1100, 1735, 1864
Hpy166II GTNNAC 5 cut(s) 181, 898, 900, 1265, 1872
Hpy188I TCNGA 7 cut(s) 453, 561, 891, 1432, 1542, 1584, 2031
Hpy188III TCNNGA 9 cut(s) 152, 253, 335, 359, 548, 788, 952, 1006, 1861
Hpy8I GTNNAC 5 cut(s) 181, 898, 900, 1265, 1872
Hpy99I CGWCG 2 cut(s) 1007, 1760
HpyCH4III ACNGT 8 cut(s) 178, 1298, 1370, 1620, 1633, 1654, 1844, 1976
HpyCH4IV ACGT 3 cut(s) 327, 1251, 1755
HpyF10VI GCNNNNNNNGC 5 cut(s) 837, 840, 1576, 1673, 1916
HpyF3I CTNAG 7 cut(s) 376, 669, 1143, 1223, 1245, 1431, 1959
HpySE526I ACGT 3 cut(s) 327, 1251, 1755
Hsp92I GRCGYC 1 cut(s) 1755
Kpn2I TCCGGA 1 cut(s) 547
Kzo9I GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
LguI GCTCTTC 2 cut(s) 1745, 1886
LmnI GCTCC 2 cut(s) 1407, 1552
LweI GCATC 4 cut(s) 278, 750, 1240, 1288
MabI ACCWGGT 1 cut(s) 507
MaeI CTAG 3 cut(s) 101, 443, 707
MaeII ACGT 3 cut(s) 327, 1251, 1755
MaeIII GTNAC 4 cut(s) 497, 799, 1688, 1838
MalI GATC 7 cut(s) 99, 950, 1107, 1310, 1539, 1865, 2092
MboI GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
MfeI CAATTG 2 cut(s) 701, 1457
MflI RGATCY 2 cut(s) 948, 1308
MhlI GDGCHC 2 cut(s) 1251, 1628
MlsI TGGCCA 4 cut(s) 615, 1286, 1649, 1763
MluNI TGGCCA 4 cut(s) 615, 1286, 1649, 1763
MmeI TCCRAC 2 cut(s) 1457, 2060
Mox20I TGGCCA 4 cut(s) 615, 1286, 1649, 1763
MroI TCCGGA 1 cut(s) 547
MroXI GAANNNNTTC 3 cut(s) 39, 885, 1120
MscI TGGCCA 4 cut(s) 615, 1286, 1649, 1763
MseI TTAA 6 cut(s) 45, 258, 969, 981, 1290, 1439
MslI CAYNNNNRTG 4 cut(s) 576, 1597, 1621, 1748
Msp20I TGGCCA 4 cut(s) 615, 1286, 1649, 1763
MspA1I CMGCKG 3 cut(s) 1244, 1547, 1667
MspI CCGG 2 cut(s) 351, 548
MspR9I CCNGG 3 cut(s) 509, 794, 1683
MunI CAATTG 2 cut(s) 701, 1457
MvaI CCWGG 3 cut(s) 509, 794, 1683
MvnI CGCG 1 cut(s) 143
MwoI GCNNNNNNNGC 5 cut(s) 837, 840, 1576, 1673, 1916
NcoI CCATGG 1 cut(s) 105
NdeII GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
NheI GCTAGC 1 cut(s) 706
NlaIV GGNNCC 1 cut(s) 90
NmeAIII GCCGAG 2 cut(s) 297, 2052
NmuCI GTSAC 3 cut(s) 497, 799, 1838
NspI RCATGY 1 cut(s) 977
OliI CACNNNNGTG 1 cut(s) 1621
PaeR7I CTCGAG 1 cut(s) 786
PagI TCATGA 1 cut(s) 1860
PaqCI CACCTGC 1 cut(s) 1754
PciSI GCTCTTC 2 cut(s) 1745, 1886
PcsI WCGNNNNNNNCGW 2 cut(s) 324, 333
PdmI GAANNNNTTC 3 cut(s) 39, 885, 1120
PfeI GAWTC 6 cut(s) 467, 544, 553, 1121, 1721, 1936
PflFI GACNNNGTC 1 cut(s) 1960
PflMI CCANNNNNTGG 1 cut(s) 867
PpuMI RGGWCCY 1 cut(s) 89
PshBI ATTAAT 2 cut(s) 258, 1439
PsiI TTATAA 1 cut(s) 1161
Psp1406I AACGTT 1 cut(s) 327
Psp5II RGGWCCY 1 cut(s) 89
Psp6I CCWGG 3 cut(s) 507, 792, 1681
PspEI GGTNACC 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 1447
PspGI CCWGG 3 cut(s) 507, 792, 1681
PspN4I GGNNCC 1 cut(s) 90
PspPI GGNCC 3 cut(s) 89, 511, 1445
PspPPI RGGWCCY 1 cut(s) 89
PstI CTGCAG 3 cut(s) 221, 403, 1402
PsuI RGATCY 2 cut(s) 948, 1308
PsyI GACNNNGTC 1 cut(s) 1960
PvuII CAGCTG 2 cut(s) 1244, 1667
RsaI GTAC 5 cut(s) 81, 479, 653, 899, 1826
RsaNI GTAC 5 cut(s) 80, 478, 652, 898, 1825
RseI CAYNNNNRTG 4 cut(s) 576, 1597, 1621, 1748
SapI GCTCTTC 2 cut(s) 1745, 1886
SaqAI TTAA 6 cut(s) 45, 258, 969, 981, 1290, 1439
Sau3AI GATC 7 cut(s) 97, 948, 1105, 1308, 1537, 1863, 2090
Sau96I GGNCC 3 cut(s) 89, 511, 1445
SbfI CCTGCAGG 1 cut(s) 403
ScaI AGTACT 1 cut(s) 81
ScrFI CCNGG 3 cut(s) 509, 794, 1683
SdaI CCTGCAGG 1 cut(s) 403
SduI GDGCHC 2 cut(s) 1251, 1628
SexAI ACCWGGT 1 cut(s) 507
SfaNI GCATC 4 cut(s) 278, 750, 1240, 1288
SfcI CTRYAG 4 cut(s) 217, 399, 1398, 1419
Sfr274I CTCGAG 1 cut(s) 786
SinI GGWCC 2 cut(s) 89, 511
SlaI CTCGAG 1 cut(s) 786
SmiMI CAYNNNNRTG 4 cut(s) 576, 1597, 1621, 1748
SmlI CTYRAG 6 cut(s) 245, 786, 1236, 1313, 1345, 1820
SmoI CTYRAG 6 cut(s) 245, 786, 1236, 1313, 1345, 1820
Sse8387I CCTGCAGG 1 cut(s) 403
SsiI CCGC 5 cut(s) 143, 1125, 1547, 1852, 2050
SspMI CTAG 3 cut(s) 101, 443, 707
StyD4I CCNGG 3 cut(s) 507, 792, 1681
StyI CCWWGG 2 cut(s) 105, 813
TaaI ACNGT 8 cut(s) 178, 1298, 1370, 1620, 1633, 1654, 1844, 1976
TaiI ACGT 3 cut(s) 330, 1254, 1758
TaqI TCGA 3 cut(s) 787, 942, 1005
TatI WGTACW 3 cut(s) 79, 477, 897
TfiI GAWTC 6 cut(s) 467, 544, 553, 1121, 1721, 1936
Tru1I TTAA 6 cut(s) 45, 258, 969, 981, 1290, 1439
Tru9I TTAA 6 cut(s) 45, 258, 969, 981, 1290, 1439
TscAI CASTG 6 cut(s) 183, 196, 438, 1074, 1198, 1375
TseFI GTSAC 3 cut(s) 497, 799, 1838
Tsp45I GTSAC 3 cut(s) 497, 799, 1838
TspDTI ATGAA 5 cut(s) 143, 297, 587, 1008, 2050
TspGWI ACGGA 1 cut(s) 47
TspRI CASTG 6 cut(s) 183, 196, 438, 1074, 1198, 1375
Tth111I GACNNNGTC 1 cut(s) 1960
Van91I CCANNNNNTGG 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 89, 511
VspI ATTAAT 2 cut(s) 258, 1439
XapI RAATTY 2 cut(s) 424, 1027
XceI RCATGY 1 cut(s) 977
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XhoI CTCGAG 1 cut(s) 786
XmnI GAANNNNTTC 3 cut(s) 39, 885, 1120
XspI CTAG 3 cut(s) 101, 443, 707
ZraI GACGTC 1 cut(s) 1756
ZrmI AGTACT 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.