MD10G1327600.v1.1

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000724
Physical Location & Seq
Reverse (-)
40718783 .. 40721750
2968 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1327600.v1.1.491

Sequence Viewer

Length: 2352 bp
ATGGAGTACCAGAGAACACACACTGTTCAGCCAGATCAAATCGAGATAGAGTTCCAAGAGGAGGAGTTAAGCCGAATTGAAGAATTGAAAAAACCCTATGAATTTGCAATGGAGGATAACTGGGAAGGCGTGAAGGAATACTACAAGGAGAATCCGGAAAAATTGCTCAGGCCAATGACGCTGGATGGGGACAATGTACTTCACCTTGCGGCTTCTTGCGGAAGCAAATCACAAGGAAAAAGAGTCCTCGAATATTTGGTTAACATAAGCGAAAATTCAAGCAGCTATGAAAAGAGAATCTCTTTGAGGGTTCAGAATAATGACGGAAATAATGCTCTTCACCAGGTGGGTGTGTCCGGCAGTGTGGAAGCGGCAGAGTTCTTGGTGAGCAATTTCAACGAGCCTGTCAAAGTCAGTTTTACTATTGATGATGGAGACAATGATGCGCAGCCTTTGCTGTGGACTCGAAACCATTTAGGAGAAACTCCGCTCTACAGAACTGCTGCTCTTGGTCACACTGACTTGGTCAAGTTTTACGCTGCCATACTGGAGACGGACAATCCATACGTTCTTCCGATGCAGTTCAAGAGAAATGACAACATGTCCATTCTTCGTATGGCTGTCATCGCCCAACATTTTGAGACTGCTCTTTGGTTACTAGAGAACTACAATTTTCTAGCACAACAGAGAGACGATGAAGGATTGACAAGCCTTCAATTGTTAGCCCAAATGCCAAGAGCCTTTGTGCCACAGTTTCAACAGAGCCAATGGAAGATGCTCATTTATCATTGCCTTCCCGGTGGAGGAGATGTGGTCACACCAAATCAGAAGGATGATATGGAGAGCAACATGGATAGCAACCATCCCCGTCAATCCATCTTTCGGAACAAGCTTGCAGCTTTTGCTGCGAAGGCATACTATTCACTATGGGACACACTTGCTAAAGGAGGCCTGCAGGGCGGCATAATATATAAAATCTGGAAGGACAAGAAAAACAAAAAATCACTAGAGAAACTCATCCCGATACTTGTCAAGTCGGACTATTCTTGGTTACGTAATAGCAGGAAACCAAAAACCAAGACCATTTATCTGGGGTCAGTGAAAGATGATGACGGAGGAAAAAAAGAAAAGGCAGCCGCACAAACAACTAAAACGGATATGGGAAATGGCGATGACGGAGGAGAAAAAGAAAAGGCAGCCGCACAAACAGCTAAAACGGATATGGGAAATGGCGATGAGGGAGTAAAAAAAGAAAAGGTGGCCGCACAAACAGCTGAAACGGATATGGGAAATGGCGACGATGGGGGTGAAAAAGGAAAGGCAGCTGCAGAAGCAATCCAACCGGATAAGGGGGCAACCAATAAAGTTTACAACTCAACCCCATTGCTTATAGCAACCGTCACAGGAATTGTTCCCATTGTGAAGGCGATACTTAAGCACCATCCTCAAGCGGCCGAGCACGTTAACTATAACGAACGCAACATTTTGCATTTGGCAATTAAGTACCGTCAGAAACCGATTCTTAATCTTATCAGAAGCAAACCAACTGTATTGTCGAGGCTGAATGAGAGGATCGACTGCGATGGAAACACCATACTGCACCAGGCTGCAGATAGGAGTTACTACACTATAGCACTGTCTCAGAATTTAATTGGTCCTGCCATGCAGTTGCAAGCAGAGCTGCGCTGGTTTATGCGTGTGGAAGAGATACTACCGCCTCATTACAGCATGCACCACAACAAGAAGGAACTCACAGCAGAGGAGCTGTTCTACTATGAACATAACGAGCTTCTGAAATCGGCACAAGAGTGGATAAAAGAAACGGCTCAGTCATGCTCAACCGTGGCAGTGCTAGTGGCCACTGTGGTCTTTGCAGCTGCCTACGCCATCCCCGGGGGTAATGATCAAAATGGCCGTCCTATTTTCCAGGACGATCCTCTCTTTTTGCTCTTCACTTGCATGGACGTTGTGGCTATCGCCTGCTCATTGTCTTCAGTGGCTTTTTTTCTCTCTGTCCTCTCCTCTCCACTCGAGTATCCGCTTTTCATCAGCAGCCTTCCTCGCAAGATCATGACTGGATTCGTCTTGCTCTTCTTGTCCATGGCAACAACCATGCTTGCCTTTGCCGCCACCATTTTGCTCTTGATTCGTGTCGAGAAGAAATGGACCAAGTCTTTACTTTACCCCATTGCCTTTTTCCCAGTCCCTCTCTTCGGCCTACTGCAGTTTCCTATGTATCATTCTTTCAGAGTCATGTTTCAGAAAATTGATGCCTGGGTTTTGAACCCCTTCCGCTGCATTCTCAGCTTTTCCAAGAAGAGATCAATATGGGGCAAGCGTAAGGTGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

784

Amino Acids

88.4

Weight (kDa)

7.29

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 603 - 713 8.4e-22 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 447
AccBSI CCGCTC 1 cut(s) 490
AccIII TCCGGA 1 cut(s) 154
AclWI GGATC 2 cut(s) 1580, 1928
AcoI YGGCCR 4 cut(s) 1260, 1452, 1857, 1912
AcsI RAATTY 3 cut(s) 101, 274, 1645
AcuI CTGAAG 1 cut(s) 1977
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 3 cut(s) 8, 198, 1505
AfiI CCNNNNNNNGG 6 cut(s) 61, 803, 882, 1349, 1893, 2213
AflII CTTAAG 1 cut(s) 1433
AflIII ACRYGT 1 cut(s) 600
AgsI TTSAA 8 cut(s) 80, 88, 279, 397, 586, 716, 758, 2284
AhdI GACNNNNNGTC 1 cut(s) 601
AjnI CCWGG 4 cut(s) 342, 1602, 1926, 2273
AleI CACNNNNGTG 1 cut(s) 1807
Alw21I GWGCWC 1 cut(s) 1461
Alw26I GTCTC 5 cut(s) 429, 545, 635, 684, 1644
AlwI GGATC 2 cut(s) 1580, 1928
Ama87I CYCGRG 2 cut(s) 1892, 2030
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 7 cut(s) 170, 949, 1260, 1452, 1857, 1912, 2215
ApoI RAATTY 3 cut(s) 101, 274, 1645
ArsI GACNNNNNNTTYG 2 cut(s) 1900, 1932
Asp700I GAANNNNTTC 1 cut(s) 2288
AspLEI GCGC 2 cut(s) 448, 1686
AspS9I GGNCC 2 cut(s) 1655, 2166
AsuC2I CCSGG 3 cut(s) 798, 1893, 1894
AsuHPI GGTGA 4 cut(s) 194, 332, 397, 1319
AvaI CYCGRG 2 cut(s) 1892, 2030
AvaII GGWCC 2 cut(s) 1655, 2166
BaeI ACNNNNGTAYC 2 cut(s) 2018, 2051
BalI TGGCCA 1 cut(s) 1859
BarI GAAGNNNNNNTAC 4 cut(s) 125, 157, 1695, 1727
BbsI GAAGAC 1 cut(s) 1983
Bbv12I GWGCWC 1 cut(s) 1461
BccI CCATC 8 cut(s) 179, 425, 870, 884, 1295, 1449, 1577, 1895
BceAI ACGGC 2 cut(s) 1839, 1899
BciT130I CCWGG 4 cut(s) 344, 1604, 1928, 2275
BciVI GTATCC 1 cut(s) 2046
BclI TGATCA 1 cut(s) 1903
BcnI CCSGG 3 cut(s) 798, 1893, 1894
BcoDI GTCTC 5 cut(s) 429, 545, 635, 684, 1644
BfaI CTAG 4 cut(s) 659, 677, 1007, 1853
BfmI CTRYAG 6 cut(s) 493, 953, 1326, 1608, 1629, 2222
BfrI CTTAAG 1 cut(s) 1433
BfuI GTATCC 1 cut(s) 2046
BglI GCCNNNNNGGC 1 cut(s) 957
Bme1390I CCNGG 7 cut(s) 344, 798, 1604, 1893, 1894, 1928, 2275
Bme18I GGWCC 2 cut(s) 1655, 2166
BmeRI GACNNNNNGTC 1 cut(s) 601
BmeT110I CYCGRG 2 cut(s) 1892, 2030
BmgT120I GGNCC 2 cut(s) 1655, 2166
BmrFI CCNGG 7 cut(s) 344, 798, 1604, 1893, 1894, 1928, 2275
BmrI ACTGGG 2 cut(s) 130, 2195
BmsI GCATC 4 cut(s) 433, 567, 765, 2260
BmuI ACTGGG 2 cut(s) 130, 2195
BpiI GAAGAC 1 cut(s) 1983
BpmI CTGGAG 1 cut(s) 569
Bpu10I CCTNAGC 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 1431
BpuMI CCSGG 3 cut(s) 798, 1893, 1894
BsaAI YACGTR 1 cut(s) 1055
BsaJI CCNNGG 6 cut(s) 1842, 1891, 1892, 1893, 2100, 2274
BsaWI WCCGGW 2 cut(s) 154, 1342
BsaXI ACNNNNNCTCC 4 cut(s) 795, 798, 825, 828
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 803, 882, 1349, 1893, 2213
Bse1I ACTGG 4 cut(s) 125, 552, 2080, 2201
Bse3DI GCAATG 4 cut(s) 114, 787, 1382, 2187
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 4 cut(s) 344, 1604, 1928, 2275
BseDI CCNNGG 6 cut(s) 1842, 1891, 1892, 1893, 2100, 2274
BseGI GGATG 6 cut(s) 190, 838, 862, 1017, 1441, 1887
BseLI CCNNNNNNNGG 6 cut(s) 61, 803, 882, 1349, 1893, 2213
BseMI GCAATG 4 cut(s) 114, 787, 1382, 2187
BseMII CTCAG 4 cut(s) 181, 1655, 1841, 2317
BseNI ACTGG 4 cut(s) 125, 552, 2080, 2201
BseRI GAGGAG 6 cut(s) 74, 77, 819, 1194, 1775, 2011
BseX3I CGGCCG 1 cut(s) 1452
BsgI GTGCAG 1 cut(s) 1583
Bsh1285I CGRYCG 1 cut(s) 1455
BshFI GGCC 7 cut(s) 172, 951, 1262, 1454, 1859, 1914, 2217
BsiEI CGRYCG 1 cut(s) 1455
BsiHKAI GWGCWC 1 cut(s) 1461
BsiHKCI CYCGRG 2 cut(s) 1892, 2030
BsiSI CCGG 5 cut(s) 155, 357, 798, 1343, 1893
BslFI GGGAC 3 cut(s) 203, 944, 2189
BslI CCNNNNNNNGG 6 cut(s) 61, 803, 882, 1349, 1893, 2213
BsmAI GTCTC 5 cut(s) 429, 545, 635, 684, 1644
BsmBI CGTCTC 2 cut(s) 545, 684
BsmFI GGGAC 3 cut(s) 203, 944, 2189
BsmI GAATGC 1 cut(s) 2298
BsnI GGCC 7 cut(s) 172, 951, 1262, 1454, 1859, 1914, 2217
BsoBI CYCGRG 2 cut(s) 1892, 2030
Bsp1286I GDGCHC 1 cut(s) 1461
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
Bsp19I CCATGG 1 cut(s) 2100
BspANI GGCC 7 cut(s) 172, 951, 1262, 1454, 1859, 1914, 2217
BspCNI CTCAG 4 cut(s) 180, 1654, 1840, 2316
BspEI TCCGGA 1 cut(s) 154
BspHI TCATGA 1 cut(s) 2070
BspMAI CTGCAG 4 cut(s) 957, 1330, 1612, 2226
BspPI GGATC 2 cut(s) 1580, 1928
BspQI GCTCTTC 3 cut(s) 342, 1955, 2096
BspTI CTTAAG 1 cut(s) 1433
BsrBI CCGCTC 1 cut(s) 490
BsrDI GCAATG 4 cut(s) 114, 787, 1382, 2187
BsrI ACTGG 4 cut(s) 125, 552, 2080, 2201
BssECI CCNNGG 6 cut(s) 1842, 1891, 1892, 1893, 2100, 2274
BssMI GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
BssT1I CCWWGG 1 cut(s) 2100
Bst2UI CCWGG 4 cut(s) 344, 1604, 1928, 2275
Bst4CI ACNGT 8 cut(s) 25, 753, 1399, 1508, 1549, 1638, 1843, 1864
Bst6I CTCTTC 6 cut(s) 342, 1698, 1955, 2096, 2216, 2312
BstAFI CTTAAG 1 cut(s) 1433
BstAPI GCANNNNNTGC 2 cut(s) 454, 902
BstBAI YACGTR 1 cut(s) 1055
BstC8I GCNNGC 7 cut(s) 894, 953, 1674, 1730, 1981, 2118, 2336
BstDEI CTNAG 4 cut(s) 167, 1641, 1827, 2303
BstDSI CCRYGG 2 cut(s) 1842, 2100
BstF5I GGATG 6 cut(s) 190, 838, 862, 1017, 1441, 1887
BstHHI GCGC 2 cut(s) 448, 1686
BstKTI GATC 6 cut(s) 37, 1575, 1906, 1936, 2070, 2324
BstMAI GTCTC 5 cut(s) 429, 545, 635, 684, 1644
BstMBI GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
BstMCI CGRYCG 1 cut(s) 1455
BstNI CCWGG 4 cut(s) 344, 1604, 1928, 2275
BstNSI RCATGY 2 cut(s) 604, 1732
BstSCI CCNGG 7 cut(s) 342, 796, 1602, 1891, 1892, 1926, 2273
BstSFI CTRYAG 6 cut(s) 493, 953, 1326, 1608, 1629, 2222
BstSNI TACGTA 1 cut(s) 1055
BstV2I GAAGAC 1 cut(s) 1983
BstXI CCANNNNNNTGG 1 cut(s) 1090
BstZI CGGCCG 1 cut(s) 1452
BsuI GTATCC 1 cut(s) 2046
BsuRI GGCC 7 cut(s) 172, 951, 1262, 1454, 1859, 1914, 2217
BtgI CCRYGG 2 cut(s) 1842, 2100
BtgZI GCGATG 4 cut(s) 610, 1185, 1248, 1596
BtsCI GGATG 6 cut(s) 190, 838, 862, 1017, 1441, 1887
BtsI GCAGTG 2 cut(s) 367, 1854
BtsIMutI CAGTG 8 cut(s) 21, 367, 516, 1104, 1634, 1854, 1860, 2001
Cac8I GCNNGC 7 cut(s) 894, 953, 1674, 1730, 1981, 2118, 2336
CciI TCATGA 1 cut(s) 2070
CfoI GCGC 2 cut(s) 448, 1686
Cfr13I GGNCC 2 cut(s) 1655, 2166
Cfr9I CCCGGG 1 cut(s) 1892
CseI GACGC 1 cut(s) 187
CsiI ACCWGGT 1 cut(s) 342
Csp6I GTAC 3 cut(s) 7, 197, 1504
CviQI GTAC 3 cut(s) 7, 197, 1504
DdeI CTNAG 4 cut(s) 167, 1641, 1827, 2303
DpnI GATC 6 cut(s) 36, 1574, 1905, 1935, 2069, 2323
DpnII GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
DraIII CACNNNGTG 1 cut(s) 346
DriI GACNNNNNGTC 1 cut(s) 601
EaeI YGGCCR 4 cut(s) 1260, 1452, 1857, 1912
EagI CGGCCG 1 cut(s) 1452
Eam1104I CTCTTC 6 cut(s) 342, 1698, 1955, 2096, 2216, 2312
Eam1105I GACNNNNNGTC 1 cut(s) 601
EarI CTCTTC 6 cut(s) 342, 1698, 1955, 2096, 2216, 2312
EclXI CGGCCG 1 cut(s) 1452
Eco105I TACGTA 1 cut(s) 1055
Eco130I CCWWGG 1 cut(s) 2100
Eco147I AGGCCT 1 cut(s) 951
Eco47I GGWCC 2 cut(s) 1655, 2166
Eco52I CGGCCG 1 cut(s) 1452
Eco57I CTGAAG 1 cut(s) 1977
Eco88I CYCGRG 2 cut(s) 1892, 2030
EcoRII CCWGG 4 cut(s) 342, 1602, 1926, 2273
EcoT14I CCWWGG 1 cut(s) 2100
ErhI CCWWGG 1 cut(s) 2100
Esp3I CGTCTC 2 cut(s) 545, 684
FaqI GGGAC 3 cut(s) 203, 944, 2189
FbaI TGATCA 1 cut(s) 1903
FokI GGATG 6 cut(s) 197, 845, 849, 1004, 1428, 1874
FspBI CTAG 4 cut(s) 659, 677, 1007, 1853
FspI TGCGCA 1 cut(s) 447
GlaI GCGC 2 cut(s) 447, 1685
GsuI CTGGAG 1 cut(s) 569
HaeIII GGCC 7 cut(s) 172, 951, 1262, 1454, 1859, 1914, 2217
HapII CCGG 5 cut(s) 155, 357, 798, 1343, 1893
HgaI GACGC 1 cut(s) 187
HhaI GCGC 2 cut(s) 448, 1686
Hin6I GCGC 2 cut(s) 446, 1684
HinP1I GCGC 2 cut(s) 446, 1684
HincII GTYRAC 2 cut(s) 262, 1465
HindII GTYRAC 2 cut(s) 262, 1465
HindIII AAGCTT 1 cut(s) 890
HinfI GANTC 8 cut(s) 151, 243, 297, 463, 1519, 2079, 2146, 2250
HpaI GTTAAC 2 cut(s) 262, 1465
HpaII CCGG 5 cut(s) 155, 357, 798, 1343, 1893
HphI GGTGA 4 cut(s) 194, 332, 397, 1319
Hpy166II GTNNAC 4 cut(s) 262, 462, 1369, 1465
Hpy188III TCNNGA 8 cut(s) 43, 155, 586, 979, 1021, 2071, 2143, 2155
Hpy8I GTNNAC 4 cut(s) 262, 462, 1369, 1465
Hpy99I CGWCG 1 cut(s) 1301
HpyCH4III ACNGT 8 cut(s) 25, 753, 1399, 1508, 1549, 1638, 1843, 1864
HpyCH4IV ACGT 4 cut(s) 567, 1054, 1461, 1965
HpyF3I CTNAG 4 cut(s) 167, 1641, 1827, 2303
HpySE526I ACGT 4 cut(s) 567, 1054, 1461, 1965
HspAI GCGC 2 cut(s) 446, 1684
Kpn2I TCCGGA 1 cut(s) 154
Ksp22I TGATCA 1 cut(s) 1903
KspAI GTTAAC 2 cut(s) 262, 1465
Kzo9I GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
LguI GCTCTTC 3 cut(s) 342, 1955, 2096
LmnI GCTCC 1 cut(s) 1762
LweI GCATC 4 cut(s) 433, 567, 765, 2260
MabI ACCWGGT 1 cut(s) 342
MaeI CTAG 4 cut(s) 659, 677, 1007, 1853
MaeII ACGT 4 cut(s) 567, 1054, 1461, 1965
MaeIII GTNAC 6 cut(s) 512, 654, 814, 1050, 1399, 1619
MalI GATC 6 cut(s) 36, 1574, 1905, 1935, 2069, 2323
MbiI CCGCTC 1 cut(s) 490
MboI GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
MfeI CAATTG 1 cut(s) 716
MhlI GDGCHC 1 cut(s) 1461
MlsI TGGCCA 1 cut(s) 1859
MluNI TGGCCA 1 cut(s) 1859
MlyI GAGTC 3 cut(s) 252, 457, 2259
MmeI TCCRAC 2 cut(s) 1017, 1363
Mox20I TGGCCA 1 cut(s) 1859
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 2288
MscI TGGCCA 1 cut(s) 1859
MseI TTAA 7 cut(s) 68, 261, 1434, 1464, 1500, 1524, 1649
MslI CAYNNNNRTG 2 cut(s) 1807, 1958
Msp20I TGGCCA 1 cut(s) 1859
MspA1I CMGCKG 4 cut(s) 1274, 1325, 1877, 2295
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 5 cut(s) 155, 357, 798, 1343, 1893
MspR9I CCNGG 7 cut(s) 344, 798, 1604, 1893, 1894, 1928, 2275
MunI CAATTG 1 cut(s) 716
Mva1269I GAATGC 1 cut(s) 2298
MvaI CCWGG 4 cut(s) 344, 1604, 1928, 2275
NciI CCSGG 3 cut(s) 798, 1893, 1894
NcoI CCATGG 1 cut(s) 2100
NdeII GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
NmeAIII GCCGAG 1 cut(s) 1480
NmuCI GTSAC 3 cut(s) 512, 814, 1399
NsbI TGCGCA 1 cut(s) 447
NspI RCATGY 2 cut(s) 604, 1732
OliI CACNNNNGTG 1 cut(s) 1807
PaeI GCATGC 1 cut(s) 1732
PaeR7I CTCGAG 1 cut(s) 2030
PagI TCATGA 1 cut(s) 2070
PceI AGGCCT 1 cut(s) 951
PciI ACATGT 1 cut(s) 600
PciSI GCTCTTC 3 cut(s) 342, 1955, 2096
PctI GAATGC 1 cut(s) 2298
PdmI GAANNNNTTC 1 cut(s) 2288
PfeI GAWTC 5 cut(s) 151, 297, 1519, 2079, 2146
PflFI GACNNNGTC 2 cut(s) 524, 2170
PfoI TCCNGGA 1 cut(s) 1926
PleI GAGTC 3 cut(s) 251, 457, 2258
PpsI GAGTC 3 cut(s) 251, 457, 2258
Ppu21I YACGTR 1 cut(s) 1055
PscI ACATGT 1 cut(s) 600
Psp6I CCWGG 4 cut(s) 342, 1602, 1926, 2273
PspGI CCWGG 4 cut(s) 342, 1602, 1926, 2273
PspPI GGNCC 2 cut(s) 1655, 2166
PspXI VCTCGAGB 1 cut(s) 2030
PstI CTGCAG 4 cut(s) 957, 1330, 1612, 2226
PsyI GACNNNGTC 2 cut(s) 524, 2170
PvuII CAGCTG 3 cut(s) 1274, 1325, 1877
RsaI GTAC 3 cut(s) 8, 198, 1505
RsaNI GTAC 3 cut(s) 7, 197, 1504
RseI CAYNNNNRTG 2 cut(s) 1807, 1958
SapI GCTCTTC 3 cut(s) 342, 1955, 2096
SaqAI TTAA 7 cut(s) 68, 261, 1434, 1464, 1500, 1524, 1649
Sau3AI GATC 6 cut(s) 34, 1572, 1903, 1933, 2067, 2321
Sau96I GGNCC 2 cut(s) 1655, 2166
SbfI CCTGCAGG 1 cut(s) 957
SchI GAGTC 3 cut(s) 252, 457, 2259
ScrFI CCNGG 7 cut(s) 344, 798, 1604, 1893, 1894, 1928, 2275
SdaI CCTGCAGG 1 cut(s) 957
SduI GDGCHC 1 cut(s) 1461
SexAI ACCWGGT 1 cut(s) 342
SfaNI GCATC 4 cut(s) 433, 567, 765, 2260
SfcI CTRYAG 6 cut(s) 493, 953, 1326, 1608, 1629, 2222
Sfr274I CTCGAG 1 cut(s) 2030
SinI GGWCC 2 cut(s) 1655, 2166
SlaI CTCGAG 1 cut(s) 2030
SmaI CCCGGG 1 cut(s) 1894
SmiMI CAYNNNNRTG 2 cut(s) 1807, 1958
SmlI CTYRAG 3 cut(s) 1433, 1446, 2030
SmoI CTYRAG 3 cut(s) 1433, 1446, 2030
SnaBI TACGTA 1 cut(s) 1055
SphI GCATGC 1 cut(s) 1732
Sse8387I CCTGCAGG 1 cut(s) 957
SseBI AGGCCT 1 cut(s) 951
SspI AATATT 1 cut(s) 254
SspMI CTAG 4 cut(s) 659, 677, 1007, 1853
StuI AGGCCT 1 cut(s) 951
StyD4I CCNGG 7 cut(s) 342, 796, 1602, 1891, 1892, 1926, 2273
StyI CCWWGG 1 cut(s) 2100
TaaI ACNGT 8 cut(s) 25, 753, 1399, 1508, 1549, 1638, 1843, 1864
TaiI ACGT 4 cut(s) 570, 1057, 1464, 1968
TaqI TCGA 7 cut(s) 42, 249, 466, 1556, 1575, 2031, 2154
TatI WGTACW 1 cut(s) 196
TauI GCSGC 8 cut(s) 212, 374, 963, 1139, 1202, 1265, 1454, 2129
TfiI GAWTC 5 cut(s) 151, 297, 1519, 2079, 2146
Tru1I TTAA 7 cut(s) 68, 261, 1434, 1464, 1500, 1524, 1649
Tru9I TTAA 7 cut(s) 68, 261, 1434, 1464, 1500, 1524, 1649
TscAI CASTG 8 cut(s) 28, 367, 523, 1104, 1641, 1854, 1867, 2001
TseFI GTSAC 3 cut(s) 512, 814, 1399
Tsp45I GTSAC 3 cut(s) 512, 814, 1399
TspDTI ATGAA 5 cut(s) 114, 303, 711, 1791, 2035
TspGWI ACGGA 7 cut(s) 339, 569, 1128, 1169, 1191, 1232, 1295
TspMI CCCGGG 1 cut(s) 1892
TspRI CASTG 8 cut(s) 28, 367, 523, 1104, 1641, 1854, 1867, 2001
Tth111I GACNNNGTC 2 cut(s) 524, 2170
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 2 cut(s) 1655, 2166
XapI RAATTY 3 cut(s) 101, 274, 1645
XceI RCATGY 2 cut(s) 604, 1732
XcmI CCANNNNNNNNNTGG 1 cut(s) 613
XhoI CTCGAG 1 cut(s) 2030
XmaI CCCGGG 1 cut(s) 1892
XmnI GAANNNNTTC 1 cut(s) 2288
XspI CTAG 4 cut(s) 659, 677, 1007, 1853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.