pycom05g32090

Ankyrin repeat-containing protein At3g12360-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000724
Physical Location & Seq
Forward (+)
31615579 .. 31618715
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g32090.6

Sequence Viewer

Length: 2244 bp
ATGGCATCCCAGATAACGCACACTGGTCAGCCAGATCAAGACGAGGAAGAGGATAATTCAGGCCAATTTGGAGATATTGAAGAGTTGAAAACCCCCTATCGATTTGTCTTAGAGGATAAATGGGACAAGGTGAAGGAATACTATAAGCAGAATCCGAGAATGTTGCACCGCCAAATGACGCTGCAGGGGGAAAATGTACTTCACCTTGCCGCTTCTTCTTGCAGCAAATTACAATGCAAAGAAGTCCTCGAATTTTTAGTTGATATATGCGTCAATGACAGTGACAGCATTTCAACCCACAAGTACAAGAGATGGTCCACCCACGAGTACAATAGATGGTCCTTGAGGGTTCAAAATAAAGGCGGAAACAACGCTCTTCACCAGGTGAGTGTGTCCGGCAGTGTGGAAGCGGCTAGGTTCTTGGTGAGGAGGTTCAACGAGCCTATCGCAGATCGAAGTATTCCCAATCTGAACTACCTTAGTACTTATGATGAAAAGAAACGTAACCCCGCGCGGAAGCTGCTGTGGACTCGGAATGGTTTAGGAGAAACTCCACTCTACAGAGCGGCTGCTCGCGGTCACAGTGGCTTGCTCAAGTTTTACATGGAAAATAAGGCGGAAGATTATTGGCAGCACTTCCTGAGACGTGACCAACAGACCCCTCTTCGTATGGCTGTCATTGGCCAACATTTTGAGACTGCTCATTGGTTGCACAAGAACTTCTTCTTACTGGGAGAAATGCCAGACGAGGAGGGATTGACAGCCCTTCAATTGTTAGCCCATATGCCAAAGGCCTTTGAGCCACATTTTCAACAAAGCCATTGGAAGATGCTCATTTATCATTGCCTTCCTAATGGAGAAGATGTGGAGATGGATGGAGAAGATGTGGAGAAGGATGACGTGGAGAGCGGCATGAAGAGCAACCATCCCCGTCAATCCATCTTTCGGAAGAAACTTGCAGTTGTCATGAAGCCTTACTATTCATTACTGGACTCCCTTGAAGGAAGAGGAGGCCTTGCTGGCACAATCTACAGAATATGGAAAGACAAGAAAAATAAAAATGCACTGAAGAAACTCATCAAATCGCTCGTCAAACCGGACGACACTTGGCTGGTTAGTAGTGAAGAAAACAGCAGCACCATTTCTCTGGGGTCATGGAAAGATCCTGAGAAAGGTGGTGATGGTGGAGGCAAAACAGGAAAGGCAATTACAGAAGAAACCAAATCGGCATTGAAAGAGACGGCGATGGTTGAAGTTAACAAATCTACCCCATTGTTTATAGCAACTGTCAAAGGAAATGTACCCATTGTGCAGGCGATACTTAAGAAGCATCCTCAAGCAGTCGAGCACATTAACCATAAGGAACACAACATTTTGCATCTGGCCATTAAGAACCGCCAGAAAGAGATCCTTAAGCTTATCGCAAGCAAACCAACTTTGATGTCGATGTTGAATGAGAAGATAGACCACCAAGGAAACACCTTATTGCACCAGGCTGCAGATAGGAGTTACTACTCTATATCATTGACTCAGCAATTAATAGGCCCTGCCATGCAATTGCAAGAAGAGCTGCACTGGTTTGAGCGTGTAAAAGGGATAATACCGCCTCATTACACCATTCACCACAACCATTACAATCAGACAGCGGACGACTTGTTCAACTCTTGGCATGACGAACTTTTGAAGGAAGCACAAAAATGGGTAAAAGACACGGCTCAGTCATGCTCAACCGTGGCGGTGCTAGTTGCCACTGTAGTCTTTGCAGCTGCCTACACCATTCCCGGGGGGACTAATGGCCAAAATGGCCTTCCTCTTTTCCAGATCGATCCTCTCTTTTTGCTCTTCACCTGCATGGACGTTGTGGCCATCGCCAGCTCATTGTCTTCTGTGGCATTCTTTCTCTCGGTCCTCTCCTCCCCTCTCGAGTACCCACTTTTTGTTAGCAGCATTCCTAACAAGATCATGGCAGGTTTCGTCTTGCTCTTCATTTCCATGGCAACAACCATGCTCGCCTTTGCTGCCACCATTTTGTTGTTGATTCGCGTCGAGAAGAAATGGACCAAGTCTCTACTTTACCCAATTGCCTTTTTCCCAGTCCCTCTATTCGGCTTGCTTCAATTTCCTATGTATCATTCCTTCAAAGTCGTGTTTCATGAAATTAATGCTTGGTTTTTCAAACCCTTACTCGACTTGCTTGGCTTTCCCAAGAAGAGATCAATATGGGGCAAGAGTAAGGCGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

748

Amino Acids

85.16

Weight (kDa)

8.62

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01330 FvH4_3g01340
malus_domestica MD05G1025600.v1.1 MD05G1025700.v1.1 MD05G1026000.v1.1 MD05G1353100.v1.1 MD05G1353500.v1.1 MD05G1353600.v1.1 MD05G1353800.v1.1 MD05G1354800.v1.1 MD09G1059700.v1.1 MD09G1059800.v1.1 MD10G1327600.v1.1 MD10G1327700.v1.1 MD10G1327800.v1.1
prunus_persica Prupe.4G014100_v2.0.a1 Prupe.4G014100_v2.0.a1 Prupe.4G014200_v2.0.a1 Prupe.4G014300_v2.0.a1 Prupe.4G014400_v2.0.a1 Prupe.7G089200_v2.0.a1 Prupe.8G021100_v2.0.a1 Prupe.8G029400_v2.0.a1 Prupe.8G029600_v2.0.a1 Prupe.8G029900_v2.0.a1 Prupe.8G030300_v2.0.a1
pyrus_communis pycom05g01740 pycom05g01780 pycom05g32030 pycom05g32040 pycom05g32050 pycom05g32070 pycom05g32080 pycom05g32090 pycom10g27710 pycom10g27740 pycom10g27760 pycom13g16890 pycom17g07270 pycom17g07280 pycom17g07290
rosa_chinensis RchiOBHm_Chr5g0001901 RchiOBHm_Chr5g0001921 RchiOBHm_Chr5g0001941
rosa_laevigata RLG00000030980 RLG00000030981 RLG00000030984
rosa_multiflora Rmu_sc0000378.1_g000012 Rmu_sc0000378.1_g000015 Rmu_sc0005788.1_g000001 Rmu_sc0006008.1_g000002
rosa_roxburghii Rroxscaffold_1G00071320 Rroxscaffold_1G00071340 Rroxscaffold_1G00071350 Rroxscaffold_1G00074390 Rroxscaffold_1G00074410 Rroxscaffold_1G00074460
rosa_rugosa Rorug04G0393700 Rorug04G0393800 Rorug04G0393900 Rorug04G0394000
rosa_samantha Rh5AG015000 Rh5BG018400 Rh5BG018500 Rh5BG018600 Rh5BG018700 Rh5CG016100 Rh5DG016600 Rh5DG016800 Rh5DG017000
rosa_wichuraiana Rw5G001450 Rw5G001460 Rw5G001480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1856
Acc36I ACCTGC 2 cut(s) 1856, 1958
AccBSI CCGCTC 2 cut(s) 566, 909
AccII CGCG 4 cut(s) 512, 514, 576, 2043
AclWI GGATC 3 cut(s) 1157, 1402, 1820
AcoI YGGCCR 4 cut(s) 682, 1383, 1795, 1863
AcsI RAATTY 1 cut(s) 251
AcuI CTGAAG 1 cut(s) 1088
AdeI CACNNNGTG 1 cut(s) 385
AfaI GTAC 6 cut(s) 198, 305, 329, 484, 1302, 1928
AfiI CCNNNNNNNGG 4 cut(s) 945, 1172, 1782, 2105
AflII CTTAAG 2 cut(s) 1322, 1412
AjiI CACGTC 2 cut(s) 647, 901
AjnI CCWGG 2 cut(s) 381, 1491
AjuI GAANNNNNNNTTGG 2 cut(s) 1791, 1823
AloI GAACNNNNNNTCC 2 cut(s) 1640, 1672
AluBI AGCT 5 cut(s) 520, 1417, 1570, 1766, 1875
AluI AGCT 5 cut(s) 520, 1417, 1570, 1766, 1875
Alw21I GWGCWC 1 cut(s) 1350
Alw26I GTCTC 4 cut(s) 637, 689, 1232, 2070
AlwI GGATC 3 cut(s) 1157, 1402, 1820
Ama87I CYCGRG 2 cut(s) 1781, 1922
AoxI GGCC 9 cut(s) 61, 682, 792, 1012, 1383, 1543, 1795, 1804, 1863
ApoI RAATTY 1 cut(s) 251
ArsI GACNNNNNNTTYG 2 cut(s) 1074, 1106
AseI ATTAAT 2 cut(s) 1538, 2160
Asp700I GAANNNNTTC 1 cut(s) 722
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 5 cut(s) 315, 339, 1544, 1906, 2058
AsuC2I CCSGG 2 cut(s) 1782, 1783
AsuHPI GGTGA 8 cut(s) 142, 194, 371, 397, 436, 1190, 1613, 1837
AvaI CYCGRG 2 cut(s) 1781, 1922
AvaII GGWCC 4 cut(s) 315, 339, 1906, 2058
BalI TGGCCA 4 cut(s) 684, 1385, 1797, 1865
BarI GAAGNNNNNNTAC 2 cut(s) 2120, 2152
BauI CACGAG 1 cut(s) 323
BbsI GAAGAC 1 cut(s) 1875
Bbv12I GWGCWC 1 cut(s) 1350
BccI CCATC 9 cut(s) 306, 330, 865, 869, 933, 947, 1175, 1240, 1874
BceAI ACGGC 2 cut(s) 1257, 1728
BcgI CGANNNNNNTGC 2 cut(s) 145, 179
BciT130I CCWGG 2 cut(s) 383, 1493
BcnI CCSGG 2 cut(s) 1782, 1783
BcoDI GTCTC 4 cut(s) 637, 689, 1232, 2070
BfaI CTAG 2 cut(s) 414, 1742
BfmI CTRYAG 5 cut(s) 182, 559, 1030, 1497, 1752
BfrI CTTAAG 2 cut(s) 1322, 1412
BfuAI ACCTGC 2 cut(s) 1856, 1958
BglI GCCNNNNNGGC 2 cut(s) 1020, 1803
BmcAI AGTACT 1 cut(s) 484
Bme1390I CCNGG 4 cut(s) 383, 1493, 1782, 1783
Bme18I GGWCC 4 cut(s) 315, 339, 1906, 2058
BmeT110I CYCGRG 2 cut(s) 1781, 1922
BmgBI CACGTC 2 cut(s) 647, 901
BmgT120I GGNCC 5 cut(s) 315, 339, 1544, 1906, 2058
BmrFI CCNGG 4 cut(s) 383, 1493, 1782, 1783
BmrI ACTGGG 2 cut(s) 740, 2087
BmsI GCATC 4 cut(s) 14, 819, 1339, 1387
BmuI ACTGGG 2 cut(s) 740, 2087
BpiI GAAGAC 1 cut(s) 1875
BpuEI CTTGAG 3 cut(s) 364, 578, 1320
BpuMI CCSGG 2 cut(s) 1782, 1783
Bsa29I ATCGAT 2 cut(s) 100, 1824
BsaJI CCNNGG 5 cut(s) 1471, 1731, 1781, 1782, 1992
BsaWI WCCGGW 1 cut(s) 1096
BsaXI ACNNNNNCTCC 4 cut(s) 849, 870, 879, 900
Bsc4I CCNNNNNNNGG 4 cut(s) 945, 1172, 1782, 2105
Bse1I ACTGG 5 cut(s) 28, 735, 993, 1580, 2093
Bse3DI GCAATG 1 cut(s) 841
BseBI CCWGG 2 cut(s) 383, 1493
BseCI ATCGAT 2 cut(s) 100, 1824
BseDI CCNNGG 5 cut(s) 1471, 1731, 1781, 1782, 1992
BseGI GGATG 5 cut(s) 5, 880, 901, 925, 1330
BseLI CCNNNNNNNGG 4 cut(s) 945, 1172, 1782, 2105
BseMI GCAATG 1 cut(s) 841
BseMII CTCAG 4 cut(s) 632, 1158, 1544, 1730
BseNI ACTGG 5 cut(s) 28, 735, 993, 1580, 2093
BseRI GAGGAG 4 cut(s) 442, 764, 1023, 1903
BsgI GTGCAG 2 cut(s) 1331, 1556
Bsh1236I CGCG 4 cut(s) 512, 514, 576, 2043
BshFI GGCC 9 cut(s) 63, 684, 794, 1014, 1385, 1545, 1797, 1806, 1865
BshVI ATCGAT 2 cut(s) 100, 1824
BsiHKAI GWGCWC 1 cut(s) 1350
BsiHKCI CYCGRG 2 cut(s) 1781, 1922
BsiSI CCGG 3 cut(s) 396, 1097, 1782
BslFI GGGAC 3 cut(s) 137, 1801, 2081
BslI CCNNNNNNNGG 4 cut(s) 945, 1172, 1782, 2105
BsmAI GTCTC 4 cut(s) 637, 689, 1232, 2070
BsmBI CGTCTC 2 cut(s) 637, 1232
BsmFI GGGAC 3 cut(s) 137, 1801, 2081
BsmI GAATGC 2 cut(s) 1892, 1947
BsnI GGCC 9 cut(s) 63, 684, 794, 1014, 1385, 1545, 1797, 1806, 1865
BsoBI CYCGRG 2 cut(s) 1781, 1922
Bsp1286I GDGCHC 1 cut(s) 1350
Bsp143I GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
Bsp19I CCATGG 1 cut(s) 1992
BspANI GGCC 9 cut(s) 63, 684, 794, 1014, 1385, 1545, 1797, 1806, 1865
BspCNI CTCAG 4 cut(s) 633, 1159, 1543, 1729
BspDI ATCGAT 2 cut(s) 100, 1824
BspFNI CGCG 4 cut(s) 512, 514, 576, 2043
BspHI TCATGA 2 cut(s) 966, 2152
BspMAI CTGCAG 2 cut(s) 186, 1501
BspMI ACCTGC 2 cut(s) 1856, 1958
BspPI GGATC 3 cut(s) 1157, 1402, 1820
BspQI GCTCTTC 5 cut(s) 381, 911, 1560, 1847, 1988
BspTI CTTAAG 2 cut(s) 1322, 1412
BsrBI CCGCTC 2 cut(s) 566, 909
BsrDI GCAATG 1 cut(s) 841
BsrI ACTGG 5 cut(s) 28, 735, 993, 1580, 2093
BssECI CCNNGG 5 cut(s) 1471, 1731, 1781, 1782, 1992
BssMI GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
BssSI CACGAG 1 cut(s) 323
BssT1I CCWWGG 2 cut(s) 1471, 1992
Bst2BI CACGAG 1 cut(s) 323
Bst2UI CCWGG 2 cut(s) 383, 1493
Bst4CI ACNGT 5 cut(s) 281, 584, 1288, 1732, 1753
BstAFI CTTAAG 2 cut(s) 1322, 1412
BstC8I GCNNGC 8 cut(s) 574, 590, 1021, 1314, 1426, 1873, 2010, 2111
BstDEI CTNAG 6 cut(s) 109, 479, 641, 1167, 1530, 1716
BstDSI CCRYGG 2 cut(s) 1731, 1992
BstENI CCTNNNNNAGG 1 cut(s) 1170
BstF5I GGATG 5 cut(s) 5, 880, 901, 925, 1330
BstFNI CGCG 4 cut(s) 512, 514, 576, 2043
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 8 cut(s) 37, 454, 1165, 1410, 1824, 1828, 1962, 2216
BstMAI GTCTC 4 cut(s) 637, 689, 1232, 2070
BstMBI GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
BstMWI GCNNNNNNNGC 6 cut(s) 520, 918, 1020, 1567, 1803, 2018
BstNI CCWGG 2 cut(s) 383, 1493
BstSCI CCNGG 4 cut(s) 381, 1491, 1780, 1781
BstSFI CTRYAG 5 cut(s) 182, 559, 1030, 1497, 1752
BstUI CGCG 4 cut(s) 512, 514, 576, 2043
BstV2I GAAGAC 1 cut(s) 1875
BstX2I RGATCY 2 cut(s) 1162, 1407
BstXI CCANNNNNNTGG 1 cut(s) 1147
BstYI RGATCY 2 cut(s) 1162, 1407
Bsu15I ATCGAT 2 cut(s) 100, 1824
BsuRI GGCC 9 cut(s) 63, 684, 794, 1014, 1385, 1545, 1797, 1806, 1865
BsuTUI ATCGAT 2 cut(s) 100, 1824
BtgI CCRYGG 2 cut(s) 1731, 1992
BtgZI GCGATG 2 cut(s) 1259, 1852
BtrI CACGTC 2 cut(s) 647, 901
BtsCI GGATG 5 cut(s) 5, 880, 901, 925, 1330
BtsI GCAGTG 1 cut(s) 406
BtsIMutI CAGTG 7 cut(s) 21, 286, 406, 589, 1064, 1573, 1749
BveI ACCTGC 2 cut(s) 1856, 1958
Cac8I GCNNGC 8 cut(s) 574, 590, 1021, 1314, 1426, 1873, 2010, 2111
CciI TCATGA 2 cut(s) 966, 2152
CfoI GCGC 1 cut(s) 514
Cfr13I GGNCC 5 cut(s) 315, 339, 1544, 1906, 2058
Cfr9I CCCGGG 1 cut(s) 1781
ClaI ATCGAT 2 cut(s) 100, 1824
CseI GACGC 3 cut(s) 187, 259, 2032
CsiI ACCWGGT 1 cut(s) 381
Csp6I GTAC 6 cut(s) 197, 304, 328, 483, 1301, 1927
CviQI GTAC 6 cut(s) 197, 304, 328, 483, 1301, 1927
DdeI CTNAG 6 cut(s) 109, 479, 641, 1167, 1530, 1716
DpnI GATC 8 cut(s) 36, 453, 1164, 1409, 1823, 1827, 1961, 2215
DpnII GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
DraIII CACNNNGTG 1 cut(s) 385
EaeI YGGCCR 4 cut(s) 682, 1383, 1795, 1863
EciI GGCGGA 2 cut(s) 378, 632
Eco130I CCWWGG 2 cut(s) 1471, 1992
Eco147I AGGCCT 2 cut(s) 794, 1014
Eco47I GGWCC 4 cut(s) 315, 339, 1906, 2058
Eco57I CTGAAG 1 cut(s) 1088
Eco88I CYCGRG 2 cut(s) 1781, 1922
EcoNI CCTNNNNNAGG 1 cut(s) 1170
EcoO109I RGGNCCY 1 cut(s) 1544
EcoRII CCWGG 2 cut(s) 381, 1491
EcoT14I CCWWGG 2 cut(s) 1471, 1992
ErhI CCWWGG 2 cut(s) 1471, 1992
Esp3I CGTCTC 2 cut(s) 637, 1232
FalI AAGNNNNNCTT 4 cut(s) 707, 739, 1395, 1427
FaqI GGGAC 3 cut(s) 137, 1801, 2081
FauI CCCGC 1 cut(s) 517
FauNDI CATATG 1 cut(s) 783
FokI GGATG 4 cut(s) 887, 908, 912, 1317
FspBI CTAG 2 cut(s) 414, 1742
GlaI GCGC 1 cut(s) 513
HaeIII GGCC 9 cut(s) 63, 684, 794, 1014, 1385, 1545, 1797, 1806, 1865
HapII CCGG 3 cut(s) 396, 1097, 1782
HgaI GACGC 3 cut(s) 187, 259, 2032
HhaI GCGC 1 cut(s) 514
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HincII GTYRAC 1 cut(s) 1258
HindII GTYRAC 1 cut(s) 1258
HindIII AAGCTT 1 cut(s) 1415
HinfI GANTC 5 cut(s) 151, 529, 992, 1528, 2038
HpaI GTTAAC 1 cut(s) 1258
HpaII CCGG 3 cut(s) 396, 1097, 1782
HphI GGTGA 8 cut(s) 142, 194, 371, 397, 436, 1190, 1613, 1837
Hpy166II GTNNAC 3 cut(s) 318, 528, 1258
Hpy188I TCNGA 5 cut(s) 156, 471, 534, 948, 1641
Hpy188III TCNNGA 8 cut(s) 38, 640, 967, 1166, 1819, 1922, 2047, 2153
Hpy8I GTNNAC 3 cut(s) 318, 528, 1258
Hpy99I CGWCG 1 cut(s) 2048
HpyAV CCTTC 8 cut(s) 127, 776, 857, 886, 995, 1678, 1817, 2146
HpyCH4III ACNGT 5 cut(s) 281, 584, 1288, 1732, 1753
HpyCH4IV ACGT 4 cut(s) 502, 646, 900, 1857
HpyF10VI GCNNNNNNNGC 6 cut(s) 520, 918, 1020, 1567, 1803, 2018
HpyF3I CTNAG 6 cut(s) 109, 479, 641, 1167, 1530, 1716
HpySE526I ACGT 4 cut(s) 502, 646, 900, 1857
HspAI GCGC 1 cut(s) 512
KspAI GTTAAC 1 cut(s) 1258
Kzo9I GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
LguI GCTCTTC 5 cut(s) 381, 911, 1560, 1847, 1988
LweI GCATC 4 cut(s) 14, 819, 1339, 1387
MabI ACCWGGT 1 cut(s) 381
MaeI CTAG 2 cut(s) 414, 1742
MaeII ACGT 4 cut(s) 502, 646, 900, 1857
MaeIII GTNAC 5 cut(s) 281, 503, 578, 647, 1508
MalI GATC 8 cut(s) 36, 453, 1164, 1409, 1823, 1827, 1961, 2215
MbiI CCGCTC 2 cut(s) 566, 909
MboI GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
MfeI CAATTG 3 cut(s) 770, 1556, 2079
MflI RGATCY 2 cut(s) 1162, 1407
MhlI GDGCHC 1 cut(s) 1350
MlsI TGGCCA 4 cut(s) 684, 1385, 1797, 1865
MluNI TGGCCA 4 cut(s) 684, 1385, 1797, 1865
MlyI GAGTC 3 cut(s) 523, 986, 1522
Mox20I TGGCCA 4 cut(s) 684, 1385, 1797, 1865
MroXI GAANNNNTTC 1 cut(s) 722
MscI TGGCCA 4 cut(s) 684, 1385, 1797, 1865
MseI TTAA 7 cut(s) 1257, 1323, 1353, 1389, 1413, 1538, 2160
MslI CAYNNNNRTG 3 cut(s) 1696, 1850, 1991
Msp20I TGGCCA 4 cut(s) 684, 1385, 1797, 1865
MspA1I CMGCKG 2 cut(s) 1646, 1766
MspCI CTTAAG 2 cut(s) 1322, 1412
MspI CCGG 3 cut(s) 396, 1097, 1782
MspR9I CCNGG 4 cut(s) 383, 1493, 1782, 1783
MunI CAATTG 3 cut(s) 770, 1556, 2079
Mva1269I GAATGC 2 cut(s) 1892, 1947
MvaI CCWGG 2 cut(s) 383, 1493
MvnI CGCG 4 cut(s) 512, 514, 576, 2043
MwoI GCNNNNNNNGC 6 cut(s) 520, 918, 1020, 1567, 1803, 2018
NciI CCSGG 2 cut(s) 1782, 1783
NcoI CCATGG 1 cut(s) 1992
NdeI CATATG 1 cut(s) 783
NdeII GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
NmuCI GTSAC 3 cut(s) 281, 578, 647
PaeR7I CTCGAG 1 cut(s) 1922
PagI TCATGA 2 cut(s) 966, 2152
PaqCI CACCTGC 1 cut(s) 1856
PceI AGGCCT 2 cut(s) 794, 1014
PciSI GCTCTTC 5 cut(s) 381, 911, 1560, 1847, 1988
PctI GAATGC 2 cut(s) 1892, 1947
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 2 cut(s) 151, 2038
PflFI GACNNNGTC 1 cut(s) 2062
PleI GAGTC 3 cut(s) 523, 986, 1522
PpsI GAGTC 3 cut(s) 523, 986, 1522
PshBI ATTAAT 2 cut(s) 1538, 2160
Psp6I CCWGG 2 cut(s) 381, 1491
PspGI CCWGG 2 cut(s) 381, 1491
PspPI GGNCC 5 cut(s) 315, 339, 1544, 1906, 2058
PstI CTGCAG 2 cut(s) 186, 1501
PsuI RGATCY 2 cut(s) 1162, 1407
PsyI GACNNNGTC 1 cut(s) 2062
PvuII CAGCTG 1 cut(s) 1766
RsaI GTAC 6 cut(s) 198, 305, 329, 484, 1302, 1928
RsaNI GTAC 6 cut(s) 197, 304, 328, 483, 1301, 1927
RseI CAYNNNNRTG 3 cut(s) 1696, 1850, 1991
SapI GCTCTTC 5 cut(s) 381, 911, 1560, 1847, 1988
SaqAI TTAA 7 cut(s) 1257, 1323, 1353, 1389, 1413, 1538, 2160
Sau3AI GATC 8 cut(s) 34, 451, 1162, 1407, 1821, 1825, 1959, 2213
Sau96I GGNCC 5 cut(s) 315, 339, 1544, 1906, 2058
ScaI AGTACT 1 cut(s) 484
SchI GAGTC 3 cut(s) 523, 986, 1522
ScrFI CCNGG 4 cut(s) 383, 1493, 1782, 1783
SduI GDGCHC 1 cut(s) 1350
SexAI ACCWGGT 1 cut(s) 381
SfaNI GCATC 4 cut(s) 14, 819, 1339, 1387
SfcI CTRYAG 5 cut(s) 182, 559, 1030, 1497, 1752
SfiI GGCCNNNNNGGCC 1 cut(s) 1803
Sfr274I CTCGAG 1 cut(s) 1922
SinI GGWCC 4 cut(s) 315, 339, 1906, 2058
SlaI CTCGAG 1 cut(s) 1922
SmaI CCCGGG 1 cut(s) 1783
SmiMI CAYNNNNRTG 3 cut(s) 1696, 1850, 1991
SmlI CTYRAG 6 cut(s) 343, 593, 1322, 1335, 1412, 1922
SmoI CTYRAG 6 cut(s) 343, 593, 1322, 1335, 1412, 1922
SseBI AGGCCT 2 cut(s) 794, 1014
SspMI CTAG 2 cut(s) 414, 1742
StuI AGGCCT 2 cut(s) 794, 1014
StyD4I CCNGG 4 cut(s) 381, 1491, 1780, 1781
StyI CCWWGG 2 cut(s) 1471, 1992
TaaI ACNGT 5 cut(s) 281, 584, 1288, 1732, 1753
TaiI ACGT 4 cut(s) 505, 649, 903, 1860
TaqI TCGA 9 cut(s) 100, 249, 454, 1344, 1445, 1824, 1923, 2046, 2187
TaqII GACCGA 1 cut(s) 1894
TatI WGTACW 4 cut(s) 196, 303, 327, 482
TauI GCSGC 4 cut(s) 212, 413, 569, 912
TfiI GAWTC 2 cut(s) 151, 2038
Tru1I TTAA 7 cut(s) 1257, 1323, 1353, 1389, 1413, 1538, 2160
Tru9I TTAA 7 cut(s) 1257, 1323, 1353, 1389, 1413, 1538, 2160
TscAI CASTG 7 cut(s) 28, 286, 406, 589, 1071, 1580, 1756
TseFI GTSAC 3 cut(s) 281, 578, 647
Tsp45I GTSAC 3 cut(s) 281, 578, 647
TspDTI ATGAA 7 cut(s) 507, 929, 972, 983, 1975, 2141, 2169
TspMI CCCGGG 1 cut(s) 1781
TspRI CASTG 7 cut(s) 28, 286, 406, 589, 1071, 1580, 1756
Tth111I GACNNNGTC 1 cut(s) 2062
Vha464I CTTAAG 2 cut(s) 1322, 1412
VpaK11BI GGWCC 4 cut(s) 315, 339, 1906, 2058
VspI ATTAAT 2 cut(s) 1538, 2160
XagI CCTNNNNNAGG 1 cut(s) 1170
XapI RAATTY 1 cut(s) 251
XhoI CTCGAG 1 cut(s) 1922
XmaI CCCGGG 1 cut(s) 1781
XmnI GAANNNNTTC 1 cut(s) 722
XspI CTAG 2 cut(s) 414, 1742
ZrmI AGTACT 1 cut(s) 484
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.